| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2558699 | 2565488 | 6790 | 28 [0] | [0] 28 | intZ–[eutA] | intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 0 (0.000) | 28 (1.100) | 25/474 | 0.2 | 100% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | ethanolamine ammonia‑lyase reactivase EutA | |||||
TCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCTAAACACGCCCGTTATTCATCACGCCGAACGCGCCGGATACATGATCGGGGTTATCCAGTCGTTAAATCAAGGTATCCGGTTTTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGACAAGCCCTATAAACTCACCGATTCACTG > NC_000913/2558454‑2558938 | tCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatg > 1:38249‑M1/1‑245 (MQ=255) gCCGCGTCACGTACTCATCTTCAGAAGCAACCCCCGGATTTTTGCGGTTGTCCGCTACGGTCATTTCCGCCAACACCCCCTTTGCCGCCCCGCCCTCCTGGGAGCTTGCCGCTGCGCCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcga < 2:61385‑M1/251‑10 (MQ=255) ccGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGACGACACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATAAATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGCAGgacatgcg > 1:241324‑M1/1‑241 (MQ=255) cATCTTCATAGGCAATCCCCGGATTATTGCGGTTGCCCGCTACGGCTATTCCCGACACCCCCTGCTTTGCCTCCACGCGCCCCTGGGAGCTTGCCGCTCCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtc < 1:65195‑M1/250‑24 (MQ=255) ccccggATTATTGCGGAGGTCCGCTCCGGTCATTCCCCCCAACCCCCGCTTGCCCGCCCCCCGCTCTTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatcc < 2:166881‑M1/249‑41 (MQ=255) cACCGTATTATTGCGGATGTCCGTAACGGTCATGTCCGACACCCCCGGCGTTCCCGCCCCGCGCTCCTACGACCTTTGCGCTGCGACGCCCGCCAGCACATCCCCCAAACGCAGTTCTGTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatcc < 1:184726‑M1/251‑41 (MQ=255) tGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaag > 2:120851‑M1/1‑200 (MQ=255) catcgtgctttccccacaacacctgctttgccgcccCGCCCTCGTGTGAGTGGGCTGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacagccgatccgccaaaaagaggcgttccaat < 2:119493‑M1/234‑62 (MQ=255) aCGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcg > 1:194880‑M1/1‑186 (MQ=255) cggccatttccccaaccccctgctttcccgccccgcgcTCCTGTGAGCTTGCCGCTGCTACCCCCGCCAGCACAT‑CCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgattgcaccgtcaccggcacaaccgatccgccaaaaagagttgtaccaatgtcgat < 2:117739‑M1/233‑68 (MQ=255) cccgtcttgccccccccgcgctcctgtgagctgcccGCTGCGCCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcgg < 2:67957‑M1/235‑84 (MQ=255) cTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggac > 1:71877‑M1/1‑166 (MQ=255) tcgggaccctggccggggcaccgcccgccagcacatcccccgaacgcagtTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCTAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCGCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaaggtcgatatagtcccccgcgcggacaatcacttcgtcaatgac < 2:180433‑M1/228‑104 (MQ=255) gCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgg < 2:39688‑M1/251‑113 (MQ=255) cTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccacaaagaggcgaaccaatgtcgatataggcccccgcgcggacaatcacttcggcaatgactgccaacggg > 1:2840‑M1/1‑138 (MQ=255) gCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgt < 1:120851‑M1/251‑120 (MQ=255) gcccgccAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctg > 1:159419‑M1/1‑124 (MQ=255) ccgccAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtg > 2:90502‑M1/1‑122 (MQ=255) cgccAGGACATCCCCAGACCGCAGTTCGCTGGCTTTAGCCAGCACCTCTTTTCCATCCTTAAACTGATATACCTTGCCGCACAATGCGGTCTTTAGTTTCCTAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgacaaaaagaggcgtactaatgtcgttatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtaactgtgg > 2:173561‑M1/1‑121 (MQ=255) cgccAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgg < 2:14777‑M1/251‑131 (MQ=255) gcctccgccgaccgaggttagttggctttagccagcacctcTTTTACATCCTTAACATGATATACATTGCAGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcgcaaccgatccgccaaaaagaggcgtaccaatgtcgctatagtcccccgcgcggccaatcacttcgtcaatgcctgccaccgggagtggttgtagctgtgggcgcaac > 2:43688‑M1/21‑114 (MQ=255) gcccccgATCGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCTAACAATGTGGTCTTTAGTTGCATAAGTCGTGCCCGCAGGAAGtaaaggcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcattgacttgcaacggcgtttggtttagctgtggtcgcaacaac < 2:241324‑M1/250‑141 (MQ=255) cAGCACCTCTTTTACCTCCTGAAACTGAGATACATTGCCGAACAATGGTGTCTTTAGTCTCATAAGTCGTTCCCGCAGGAAGgaaatgcgagggatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatcgtcccccgcgcggactatcacttcgtcaatgactgccaacggtatttgttgtagctgtcggcgcaacagcatgcacatagctttgccaaagtcctgccc < 2:187403‑M1/251‑170 (MQ=255) cGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcg > 1:245140‑M1/1‑44 (MQ=255) gtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaa > 1:31206‑M1/1‑36 (MQ=255) tgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgctccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaat > 1:36121‑M1/1‑35 (MQ=255) cGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaaccacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaacgcgttgatgacc < 2:52228‑M1/251‑237 (MQ=255) cccTCAGTAAGgaaatgcgagtgatttcaccgtcaccggcacacccgatcccccaaaaagatgcgtaccaatgtctatatagtcccccgctcttacaatctcttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaattcctgcccggccaccaccagcaggggatgcggattcggaaaactcgcgacgaaatcgaccaacgcgttgatgaccgtca < 1:182532‑M1/251‑241 (MQ=255) | TCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCTAAACACGCCCGTTATTCATCACGCCGAACGCGCCGGATACATGATCGGGGTTATCCAGTCGTTAAATCAAGGTATCCGGTTTTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGACAAGCCCTATAAACTCACCGATTCACTG > NC_000913/2558454‑2558938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |