| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,617,409 | G→A | V29V (GTG→GTA) | deoC → | deoxyribose‑phosphate aldolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,617,409 | 0 | G | A | 98.4% | 193.1 / ‑6.0 | 64 | V29V (GTG→GTA) | deoC | deoxyribose‑phosphate aldolase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (47/16); minor base C (1/0); total (48/16) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.20e-01 | |||||||||||
AACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGAAGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTGATCGCC‑CTGTGTCATCAGGCCAA‑AACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATCCGTATCGCTACGGTAACCAACTTCCCACACGGTAACGACGACATCGACATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCTGATGAAGTTGACGTTGTGTTCCCGTACCGCGCGCT > NC_000913/4617181‑4617651 | aaCCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTATATCGAAGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGAAATTGCT‑CTGTGTCATCAGGcc > 2:545218/1‑250 (MQ=255) ccAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTATATCGAAGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCaa > 1:76264/1‑250 (MQ=255) cAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTATATCGAAGTGTGTTGCGGCGTAGATGTTAGAATACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCaa‑a > 2:283307/1‑250 (MQ=255) gCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTATATCGAAGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATTGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGAAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCgg > 1:79280/1‑251 (MQ=255) aTGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTATATCGAAGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATAcc < 1:155285/251‑1 (MQ=255) gTAAGTAGATTTCCTTAATTGTGATGTATATCGAAGTGTGTTGCGGCGTAGATGTTAGAATACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCCGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGACTGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCt > 1:596364/1‑251 (MQ=255) ccTTAATTGTGATGTATATCGAAGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTctcctc > 1:514669/1‑251 (MQ=255) aattgtgatgtagtcctaagggtgtTGGGGAGTAGATGGGAGAATACGAAGAACCTCGCAAG‑TGTATTTTTAGTGGCGACAAGCTAGGAAAAGGAAATAACTGATCTGAAAGCAA‑GCACCCGGCTTGCACGGAAATTGTTGGAGCTTACCTCCCTGAAGGTCGACGACACCGTC‑AGTAAGGTAATTCCT‑TTGTGTCATCGGGCGAA‑AACCCCTGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCt < 1:409477/229‑1 (MQ=255) tgtgATGTATATCGAAGTGTGTTGCGAAGTAGATGTTAGAATACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATATGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTAt > 2:536895/1‑251 (MQ=255) gATGTATATCGAAGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATccc > 1:143696/1‑251 (MQ=255) gATGTATATCGAAGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGAAAGGTG‑ACTTTTATTGGCGACAAGACAGGCGAATGAAATGCCTGATCTGAAAGCAA‑GCAGCCTACGTGCACTGAAATTGCTGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AACGTAATTGCT‑CTGTGTCATCAGGCAAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATccc > 1:595581/1‑251 (MQ=255) tatATCGAAGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGAtt > 1:289964/3‑251 (MQ=255) gAAGTGTGTTGCGGAGTAGATGTTAGAATACTAACACACTGGCCCGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGAAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGc > 2:43996/1‑251 (MQ=255) ggtgggggAGTAAATGTTAAAATACAAAAAAACTCGCAAGGTT‑AATTTTATTGGCGACAAGCCAGGAGAAAGAAATGACTGATCTGAAAGCAA‑GCAGTCTGCGTGCACTGAAATGAATGGCCCTGCCCCCCCTGAATGACGCCGACACCGACGAA‑AAAGTATTTGCT‑CTGTTTCATCAGGCCAA‑ACCCCCGTTCGGCAATACCGCCGCTATCTGTATCTATCCTCTCTTTATCCCGATTGCTCGCAAAAca < 2:327131/245‑2 (MQ=255) gAGTAGATGTTAGAATACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGaa > 1:58940/1‑249 (MQ=255) gTAGATGTTAGAATACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAag > 1:444435/1‑249 (MQ=255) gATGTTAGAATACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGc > 1:329654/1‑249 (MQ=255) gTTAGAATACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATAcc < 2:190875/188‑1 (MQ=255) ttAGAATACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACAGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGc > 1:1075/1‑250 (MQ=255) gAATAATAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTCTCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCAccc > 2:614593/1‑251 (MQ=255) aaataataaaaaactgaaaagggaaaTTTTATTGGCAACAAGCCAGAAGAATGAAATGTCTGATC‑GAAAACAAACCAGCCGGCGTGCCCGGAAATTGCTGGACCTGACCACCCTGAATGACCACACCCCCGCAGAG‑AAAGTAATTGCT‑CTGTTTAAACAGCCCAA‑ACCCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCAccc < 2:888/227‑1 (MQ=255) aaTACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACCAGCCAGGAGCATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAC‑ACCCCCGGTCGGCACTACCGCCGCTATCTGTCTCTATCCTCGCTTTATCCCGATTGCTCGCAACACACTGAAAGCTCAGGTCAcccc > 2:55042/1‑251 (MQ=255) aaTACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCAcccc > 1:434162/1‑251 (MQ=255) aaCAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAAt > 1:82453/1‑251 (MQ=255) aaaCTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCg > 1:16728/1‑251 (MQ=255) aacccgaaagggaaaTTTTATTGGGAACAAGCCAGAAAAATGAAATGATGGAACGGAAAGCAA‑GCAGCCTGCGTGCACTAAAATTGAGGGCCCTGACCCCCCTAAAGGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCGGGCAAA‑ACCCCCGGGCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGt < 2:257466/238‑1 (MQ=255) aCTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGCAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAACTCCGt > 2:523174/1‑250 (MQ=255) cTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTAt > 1:439727/1‑251 (MQ=255) atCGCACGGTG‑AGTTTTATTGGCGACCAGCCAGGCGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTAt > 2:125960/2‑251 (MQ=255) cAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCATGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCt > 1:222799/1‑251 (MQ=255) aaGGTG‑AATTTTATGGGCGACAAGCAAGGAGAATGAAATGAATGATCTGAAAGCAA‑GACGCCGGCGGGCGCTGAAATGGATGGCCCTGACCCCCCTGAAGGACAACGACACCGACGAG‑AAAGTAAT‑GCCTCGGGGTCATCAGGCCAA‑ACCCCGGGCCGGAAATACCGCCGCTATCTGTATCGATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTa < 1:614593/251‑1 (MQ=255) ggTG‑AATTTTATTGGCGACAAGCCAGGAGATTGAAAGGACGGATCGAAAAGAAA‑GCAGCCTGCGTGCACTGAATGTGATGGACCTGACCCCCCTGAATGACGACGACCCCGACGAG‑AAAGTAATTGCT‑CTGTGTCTTAAGGCAAA‑AACCCCGTTCGGAAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACg < 1:332094/251‑1 (MQ=255) aTTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAAc > 1:494934/1‑251 (MQ=255) aCAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCcac > 1:108032/1‑250 (MQ=255) cAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCACAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCacac > 2:417511/1‑251 (MQ=255) aaGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACg > 1:316608/1‑251 (MQ=255) aaGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACg > 1:120103/1‑251 (MQ=255) ccAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGt > 2:154579/1‑250 (MQ=255) cAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATACTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTa > 1:530941/1‑250 (MQ=255) aGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGACTGACGACAACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGATCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGCCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTcacaacaggtaac > 2:523596/1‑239 (MQ=255) aGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAac > 1:227865/1‑251 (MQ=255) tgaaatgaCTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAACGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTACCgatgac > 1:506848/1‑250 (MQ=255) aaatgaCTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGCG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGAtgacatc > 1:224896/1‑251 (MQ=255) tgatctgaacgcacaaacccTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGCAGACACCGCCGAG‑ACACTAATTGCC‑CTGTGTCATCAGGCCAACAAC‑CCGGCCGGCAATACCGCCGCTACCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCCAACCACTGAAAGCGCAGGGACCCCCGGAAATACGTATTGCTACGGTACCCAACTTCCCACACGGCAACGAagccatcgaaat > 2:269142/19‑246 (MQ=255) aacaagAAAGCAA‑GGAGCTTGGGTCCACTGAAATTGAGGGTCCTCCCCCCCGTGAATGCCAACGCCCCCGAAGAG‑AAATTAATTTCC‑CTTTGTCATCAGTCAAA‑ACCCCCGGCCGGCATTACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATgacatcgaaatc < 2:565572/244‑1 (MQ=255) aaa‑gcaGCCTGAGTGCACTGAAATTGATGGACCTGACCACCATGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGAAGGGCACCCCGGAAATCCGTATTGCTACGGTAAACAACTTCACACACGGTACCGATGACATAGAAATCGCGCTGGCAGa > 2:443218/2‑250 (MQ=255) aa‑gcaGCCTGGGTGCACTGAAATTGATGGACCTGACCCCCCTGAAGGACGACGACACCGACGAG‑AAAGTATTTGCT‑CTGTGTAATCAGGCCAA‑AACCCCGGCCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGaaa < 1:109799/251‑1 (MQ=255) aa‑gcaGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATAcc < 2:351546/112‑1 (MQ=255) aa‑gcaGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATAcc > 1:351546/1‑112 (MQ=255) gCGTGCACTGAACTTGATGGACCTGACAACCCTGAATGACGACGACACCGACGAG‑AACGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCAGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTCTCCCGATTGCTCGCAAACCACTGAACGAGCAGGGCACCCCGGCAATCCGTATTGCTACGGTAACCAACTTCCCAAACGGTAACGATGACATCGAAATCGCGCTGGCAGAACCCCGTGCgg > 2:37992/1‑251 (MQ=255) cacgaaaaTTGAGGGCCCTGACCCCCCTAAATGACGCCCACCCCTACGAA‑AAAGTAATGGCT‑CTGTTCCACCAGGCCAA‑AACCCCGGCCTGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTGCCCACACGGTAACTATGACAGCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATc < 2:82453/246‑1 (MQ=255) cACTGAACTTGATGGACCTGACCACCCTGACTGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATc > 2:65502/1‑251 (MQ=255) aaatggagggcccTGACCCCCCTGAATGACGACGCCACCAACGAG‑AAAGTAATTGCT‑TTGTGTCATCTGGCCAA‑CACCCCGGTCGGCAGTACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGAGTTCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTATCCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTa < 1:91159/240‑1 (MQ=255) aaaTTGATGGCCCTCACCACCCTGAATCACGACGCCACCGACGAA‑AAAGTATTTGCT‑CTGTGTCATCAGGCCAA‑ACCCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTa < 2:76264/251‑1 (MQ=255) aaTTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTAATTGAT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTAc > 2:243875/1‑251 (MQ=255) ggccctgccccccctaaagacggacgacCCGGACGAA‑AAAGTAATTGCT‑CTGTGTCATCAGACAAA‑ACCCCCGGTCGACATTACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGccg < 2:181774/229‑3 (MQ=255) accaccCTGAATGACGACGACACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACAGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGt > 1:561909/1‑251 (MQ=255) aggacgccgacACCGACGAA‑AAATTAATTGCT‑TTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACgtggtg < 1:545218/249‑1 (MQ=255) gacgacgacACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGtt > 1:57641/1‑251 (MQ=255) gacACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGt > 1:327681/1‑250 (MQ=255) gacACCGACGAG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGt > 1:182200/1‑250 (MQ=255) gacgaG‑AAAGTCATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGACATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATAGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTAAGGTGCCGTTGAAGTTGACGTGGTGTTCCCGTACcgcgc > 2:516144/1‑251 (MQ=255) cgaG‑AAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTAACGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCACTCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCgcgcgc > 2:574632/1‑251 (MQ=255) gag‑aAAGTAATTGCT‑CTGTGTCATCAGGCCAA‑AACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGCTTGCTCGCAAAACACTGAAAGAGCAGGGCACCCCGGAAATCCGTATTGCTACGGTAACCAACTTCCCACACGGTACCGATGACATCGAAATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCCGATGAAGTTGACGTGGTGTTCCCGTACCGCGCGCt > 2:463881/1‑251 (MQ=255) | AACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGAAGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGTG‑AATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAA‑GCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAG‑AAAGTGATCGCC‑CTGTGTCATCAGGCCAA‑AACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATCCGTATCGCTACGGTAACCAACTTCCCACACGGTAACGACGACATCGACATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCTGATGAAGTTGACGTTGTGTTCCCGTACCGCGCGCT > NC_000913/4617181‑4617651 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |