| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,771,257 | A→G | S41S (AGT→AGC) | yibH ← | inner membrane protein YibH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,771,257 | 0 | A | G | 80.6% | 137.4 / 22.1 | 73 | S41S (AGT→AGC) | yibH | inner membrane protein YibH |
| Reads supporting (aligned to +/- strand): ref base A (2/12); new base G (26/32); total (28/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.40e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.01e-01 | |||||||||||
GCACGCAGCGTCTTTATATTATGCGTCGCCGTCATCAGGTCAGCCTGAAGTCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCACTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCTTTTTCTCGGCGGCGAGTTGATGCTCCAGCCGGGAAATTCGGTCAGAAAGTGCGGCGATTTCCGGGTCAGTCGCTTTCTCCTGCGACGC > NC_000913/3771015‑3771501 | gcacgcgGCGTCTTTATATTATGCGTCGCCGTCATCAGGTCAGCCTGAAGTCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCACTCACCAg < 2:222523/251‑1 (MQ=255) cacgcaGCGTCTTTATATTATGCGTCGCCGTCATCAGGTCAGCCTGAAGTCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCAcc > 2:292942/1‑248 (MQ=255) gCGTCTTTATATTATGCGTCGCCGTCATCAGGTCAGCCTGAAGTCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCACTCACCAGAAACACg < 1:412114/251‑1 (MQ=255) gTCTTTATATTATGCGTCGCCGTCATCAGGTCAGCCTTAAGGCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCAGCAACAAAATCAAACCGCTCTCCAGAAACACGcc < 2:430218/251‑1 (MQ=255) tCTTTATATTATGCGTCGCCGTCATCAGGTCAGCCTGAAGTCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGccc > 1:561852/1‑250 (MQ=255) ttATATTATGCGTCGCCGTCATCAGGTCAGCCTGAAGTCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCTCTCACCAGAAACACGCCTcc < 2:293827/250‑1 (MQ=255) tataTTATGCGTCGCCGTCATCAGGTCAGCCTGAAGTCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTccc < 1:120284/250‑1 (MQ=255) attatGCGTCGCCGTCATCAGGTCAGCCTGAAGTCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAgc < 1:374511/250‑1 (MQ=255) atGCGTCGCCGTCATCAGGTCAGCCTGAAGTCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCACTCACCAGAAACACGCCTCCCAGcgcc < 1:613939/250‑1 (MQ=255) atGCGTCGCCGTCAGCAGGTCAGACTGAAGTCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCCCCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGGGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGATCACCAGAAACACGCCTCCCATcgcc < 2:142280/250‑1 (MQ=255) gCGTCGCCGTCATCAGGTCAGCCTGAAGTCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCgccgcc < 1:199921/251‑1 (MQ=255) cGTCATCAGGTCAGCCTGAAGTCTGTCACCTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGACTAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGccc > 2:55645/1‑250 (MQ=255) cGTCATCAGGTCAGCCTGAAGTCTGTCAACTCGCGCCTTGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCa < 1:20191/251‑1 (MQ=255) tcatcaGGTCAGCCTGAAGTCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCCGCGCCGCCGTCGcccgc > 1:95011/1‑248 (MQ=255) aGGTCAGCCTGAAGTCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTGTTGAATAAGCTGAGTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCGCCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGTTGGTGGTAGGTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCGAGCGTCCa < 2:288845/251‑1 (MQ=255) gAAGTCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTa < 2:482058/249‑1 (MQ=255) gAAGTCTGGCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTGTGGAATAAGCTGATTATTCTTGGCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTAc < 2:570034/250‑1 (MQ=255) aaGTCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCg > 1:16388/1‑251 (MQ=255) aaGTCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCg > 1:172010/1‑251 (MQ=255) gTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCGTTTGAATAAGCTGATTATTCTTTTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGTCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCAGCAACAAAATCAAACCACTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAAt < 1:575433/249‑1 (MQ=255) cAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCg < 1:71538/250‑1 (MQ=255) ccTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGTGTGGTTGTAGTTCATCAACAAAATCAAACCACTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTa < 2:446930/251‑1 (MQ=255) ggTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTGCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCACTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAg < 1:412491/251‑1 (MQ=255) aCGAACCGGTGCGAGCTTAAAAAGCACCTCGCCCGGTTGAATAAGCTGATTATTCTTGTAAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACGGCCTGTTGCGCGGTAAAAGTGTAAGGGTTGTTTTAGATCAGCAACAAAATCAAACCGCTCACCAGAAACACGCCACCCAGAGCCGCCGTCGCCAGCGTCCACTGATGGACCGGAATGCGGAAGAATTGAAAGTCCg < 2:621819/251‑1 (MQ=255) cGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGc > 1:588449/1‑251 (MQ=255) gAACCGGGTCGAGCTTAAAAAGCCCCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGcc < 1:12492/251‑1 (MQ=255) gAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCACTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGcc < 1:20116/251‑1 (MQ=255) aaCCGTGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCAGCAACAAAATCAAACCACTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGccc < 2:294716/251‑1 (MQ=255) aCCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTGCAGTAACAATTCCCGTCACCTGTGGCGGGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCACTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCATCGTCCACTGATTTACCGTAATGCGGAAGATTTTAAAGACCGCCCa < 2:620126/251‑1 (MQ=255) tAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAAAAAAATCACACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGACGCCCGCGCCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCatgccctcg > 2:334514/1‑243 (MQ=255) aaaaaGCACCTCGTCCTTTTGAATAATCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCCCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACg < 2:461272/250‑1 (MQ=255) ctagCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGTCGTGCTAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAAACGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGAAAGTTaaa > 2:193364/4‑250 (MQ=255) aTAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCCGCGCCACGTAAGTTAAAAcaatcaat > 2:71205/1‑246 (MQ=255) aGCTGAGTATTCTTGGCAGTGACTTCAGTAACAATTCCCGTCACCTTTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGTTTGTAGTTCATCAACAAAATCAAACCACTCACCAGAAACCCGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCAt < 1:5449/251‑1 (MQ=255) gCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATa < 1:513891/251‑1 (MQ=255) gCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGGGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAAGCAAACCACTCCCCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGGAAGTTAAAACAATCAATAGATCCATa < 2:343757/251‑1 (MQ=255) cTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATa > 2:191629/1‑250 (MQ=255) gATTATTCTTGTCATTGAATTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCTCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCTGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATaa < 1:86283/249‑1 (MQ=255) gATTATTCTTGTCAGGGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAAt < 1:246744/250‑1 (MQ=255) attattCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAAtt > 1:279990/1‑250 (MQ=255) tattCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACGGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACGGATTTACCGGAATGCGGAAGATTTTAAAGACCTCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATATATCCATAATTAg < 2:248506/250‑1 (MQ=255) tCTTGTCAGTGACTGCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGGGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCGCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTGACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAAGAGATCCATAATTAGAtc < 2:611969/250‑1 (MQ=255) ttGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTcc > 2:144246/1‑251 (MQ=255) tGTCAGGGACTTCAGTAACAATTCCCGTCACCTGGGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGGTAAAACAATCAATAGAGCCATAATTAGAtctc < 2:78781/249‑1 (MQ=255) tCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAATTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAAAAATCAATAGATCCATAATTAGATCTCCggg > 1:231643/1‑251 (MQ=255) cAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACAAGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGCTTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCggg > 2:146158/1‑250 (MQ=255) attGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTTTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACTCGCCTCCCATCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGaa < 1:354643/249‑1 (MQ=255) gTGACTTCAGTAACAATGCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAAc < 2:304369/251‑1 (MQ=255) aGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAACCCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAgc < 1:389343/193‑1 (MQ=255) aaCAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCGTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCAGCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGAGTTTAAATACCGCCCACGCCAGCTCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGAGCTCCTTGAACGTGGAATagtc < 2:609801/251‑1 (MQ=255) aaTTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATagtcagt > 1:60010/1‑251 (MQ=255) cccGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTCCCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCttt < 1:287061/251‑1 (MQ=255) cccGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGATAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCttt > 1:543143/1‑251 (MQ=255) ccGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCtttt < 1:68164/251‑1 (MQ=255) cGTCACCTGTGGCGTGATAGGGATCGCTATCCCTGCCTTTTGCGCGGTAAAAGCGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCttttt > 1:7836/1‑251 (MQ=255) ggCGTTATAGGGATCGCTATCACGGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCCCCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCTTTTTCTCggcggc < 1:114789/250‑1 (MQ=255) gCGTGATAGGGATCGCTACCACTGCCTTTGGCGCGGTAAAAGTTTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGTAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAACTAGATCTCCGGGAACGTGGAATAGTCAGTCTTTTACTCGGCGGCGa < 2:64171/251‑1 (MQ=255) aGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCACTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCTTTTTCTCGGCGGCGAGTTGAt < 1:278859/250‑1 (MQ=255) gCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCCCCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAAGAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCTTTTTCTCGGCGGCGAGTTGATGCTCCAGc < 2:94341/251‑1 (MQ=255) aCTGCCTTTTGCGCGGTAATAGGGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACTTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGGGGAATAGTCATTCTTTTTCTCGGCGGCGAGGTGAGGCTCCAGCCGGGaa < 2:112335/251‑1 (MQ=255) gTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCTTTTTCTCGGCGGCGAGTTGATGCTCCAGCCGGGAAATTCGGTCAGAAAGt > 1:562166/1‑251 (MQ=255) aaaaGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACCCGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCTTTTTCTCGGCGGCGAGTTGATGCTCCAGCCGGGAAATTCGGTCAGAAAGTg < 1:507605/250‑1 (MQ=255) aaaaGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCTTTTTCTCGGCGGCGAGTTGATGCTCCAGCCGGGAAATTCGGTCAGACAGTgg > 1:409081/1‑250 (MQ=255) aaaaGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCTTTTTCTCGGCGGCGAGTTGATGCTCCAGCCGGGAAATTCGGTCAGAAAGTgc > 1:9496/1‑251 (MQ=255) tgtcaGGGTGGTTGAAGTTCATCAACCAACTCAAACCGCTCACCAGAAACACGCTTCCCAGAGCCGCCGTCGCCAGCGTCCACTGCTTTCCCGGCCTGCGGCCGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGCTCTCCGGGAACGTGGACTAGTCAGTCTTTTTCTCGGCGGCGCGTTGATGCTCCAGCCGGGACATTCGGTACGAAAGTgcggcg > 2:564566/5‑250 (MQ=255) tAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCCGTCTTTTTCTCGGCGGCGAGTTGATGCTCCAGCCGGGAAATTCGGTCAGAAAGTGAGGCGAtt > 2:520804/1‑251 (MQ=255) gtggtTGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACTCGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCTTTTTCTCGGCGGCGAGTTGATGCTCCAGCCGGGAAATTCGGTCAGAAAGTGCGGCGATTTCCgg < 2:60010/251‑1 (MQ=255) gtagTAGTTCATCAACAAAATCAAACCACTCCCCAGACACACGCCTCCCAGAGACGCCGTCGCCAGCGTCCACTGCTTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCCCGTAAGTTAAAAAAATCAATAGATCCATAATTAGATCTCCGGGAAAGTGGAATAGTCAGTCTTTTTCTCGGCGGCGAGTTGCTGCTCCAGCCGGGAACTTCGGTCAGAACGAGCGGCGATTTCCGGGTc > 2:418880/4‑251 (MQ=255) ttGTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGACTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCTTTTTCTCGGCGGCGAGTTGATGCTCCAGCCGGGAAATTCGGTCAGAAAGTGCGGCGATTTCCGGGTc > 1:226446/1‑250 (MQ=255) gTAGTTCATCAACAAAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCTTTTTCTCGGCGGCGAGTTGATGCTCCAGCCGGGAAATTCGGTCAGAAAGTGCGGCGATTTCCGGGTCAg < 1:71205/250‑1 (MQ=255) caaAATCAAACCGCTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCTTTTTCTCGGCGGCGAGTTGATGCTCCAGCCGGGACATTCGGTCCGAAAGTGCGGCGATTTCCGGGTCAGTCGCTTTCTCCtt > 2:310948/1‑250 (MQ=255) aaTCAAACCACTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCTTTTTCTCGGCGGCGAGTTGATGCTCCAGCCGGGAAATTCGGTCAGAAAGTGCGGCGATTTCCGGGTCAGTCGCTTTCTCCTGCg > 1:313815/1‑250 (MQ=255) aaaCCGCTCACCAGAAACACGACTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCTTTTTCTCGGCGGCGGGTTGCTGCTCCAGCCGGGAAATTCGGTCAGACAGTGCGGCGATTTCCGGGTCAGTCGCTTTCTCCTGCGACGc > 2:277876/1‑250 (MQ=255) | GCACGCAGCGTCTTTATATTATGCGTCGCCGTCATCAGGTCAGCCTGAAGTCTGTCAACTCGCGCCTGGTAACGAACCGGGTCGAGCTTAAAAAGCACCTCGCCCTTTTGAATAAGCTGATTATTCTTGTCAGTGACTTCAGTAACAATTCCCGTCACCTGTGGCGTGATAGGGATCGCTATCACTGCCTTTTGCGCGGTAAAAGTGTAAGGGTGGTTGTAGTTCATCAACAAAATCAAACCACTCACCAGAAACACGCCTCCCAGCGCCGCCGTCGCCAGCGTCCACTGATTTACCGGAATGCGGAAGATTTTAAAGACCGCCCACGCCAGCGCCACGTAAGTTAAAACAATCAATAGATCCATAATTAGATCTCCGGGAACGTGGAATAGTCAGTCTTTTTCTCGGCGGCGAGTTGATGCTCCAGCCGGGAAATTCGGTCAGAAAGTGCGGCGATTTCCGGGTCAGTCGCTTTCTCCTGCGACGC > NC_000913/3771015‑3771501 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |