Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,500,129 G→A G74S (GGC→AGC)  frlA → fructoselysine/psicoselysine transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,500,1290GA95.7% 134.9 / ‑5.3 47G74S (GGC→AGC) frlAfructoselysine/psicoselysine transporter
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (16/29);  minor base T (2/0);  total (18/29)
Fisher's exact test for biased strand distribution p-value = 1.42e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01

GGACAAGAAAAAGGTATCGCTATGGGAAGCCAGGAACTCCAACGCAAGCTCGGATTTTGGGCCGTTCTTGCAATCGCCGTCGGGACAACCGTCGGCTCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATGGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAACGCCTATCGATCCGTTGCTCGGTAAATTTATCGCCGCCGGATTAATTATCGCCTTTATGTTGCTACACCTGCGCTCCGTTGAAGGCGGCGCAGCGTTTCAGACGCTAA  >  NC_000913/3499889‑3500375
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                      
ggACAAGAAAAAGGTATCGCTATGGGAAGCCAGGAACTCCAACGCAAGCTCGGATTTTGGGCCGTTCTTGCAATCGCCGTCGGGACAACCGTCGGCTCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGAtt                                                                                                                                                                                                                                               <  2:23025/250‑1 (MQ=255)
  aCAAGAAAAAGGTAGCGCTATGGGAAGCCAGGAACTCCAACGCAAGCTCGGATTTTGGGCCGTTCTTGCAATCGCCGTCGGGACAACCGTCGGCTCCGGTAGTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATg                                                                                                                                                                                                                                            <  1:328404/251‑1 (MQ=255)
   cAAGAAAAAGGTATCGCTATGGGAAGCCAGGAACGCCAACGCAAGCTCGGATTTTGGGCCGTTCTTGCAATCGCCGTCGGGACAACCGTCGGCTCCGGTATTTGTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTTCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGt                                                                                                                                                                                                                                           <  1:386444/251‑1 (MQ=255)
    aaGAAAAAGGTATCGCTATGGGAAGCCAGGAACTCCAACGCAAGCTCGGATTTTGGGCCGTTCTTGCAATCGCCGTCGGGACAACCGTCGGCTCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTT‑ATTTTGTTCCCGCCAAAT‑TGCGTCTATGCGGAACTCTCCCCCCCTTTTCTGCAAAATAGAGCAGATTATGtt                                                                                                                                                                                                                                          >  2:260168/1‑251 (MQ=255)
         aaaGGTATCGCTATGGGAAGCCAGGAACTCCAACGCAAGCTCGGATTTTGGGCCGTTCTTGCAATCGCCGTCGGGACAACCGTCGGCTCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCt                                                                                                                                                                                                                                     <  1:2317/251‑1 (MQ=255)
                     aTGGGAAGCCAGGAACTCCAACGCAAGCTCGGATTTTGGGCCGTTCTTGCAATCGCCGTCGGGACAACCGTCGGCTCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑CAATTTGCGGCTATGCGGGACTATCCACCCCCTATCCGGCAAATAACGCCGAATATGGTTTTCTGACAAAAGCCgg                                                                                                                                                                                                                         >  1:264008/1‑251 (MQ=255)
                       gggAAGCCAGGAACTCCAACGCAAGCTCGGATTTTGGGCCGTTCTTGCAATCGCCGTCGGGACAACCGTCGGCGCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGTGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAAGGCCGGaa                                                                                                                                                                                                                       <  2:218430/251‑1 (MQ=255)
                             ccAGGAACTCCAACGCAAGCTCGGATTTTGGGCCGTTCTTGCAATCGCCGTCGGGACAACCGTCGGCTCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCGTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGAc                                                                                                                                                                                                                 <  1:537498/251‑1 (MQ=255)
                                  aaCTCCAACGCAAGCTAGGATTTTGGGCCGTTCTTGCAATCGCCGTCGGGACAACCGTCGGCTCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑GTA‑ATTGTGATCCCGC‑CAATGTGGGGCTATTCGGGACTATTCACCGCTTAATCGGAAAATTGCGCAGGTTTTTTTTTTCTTAAAAATTACGGAAGCCGAcccctt                                                                                                                                                                                                            >  1:503987/1‑247 (MQ=255)
                                                cTCGGATTTTGGGCCGTTCTTGCAATCGCCGTCGGGACAACCGTCGGCTCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑GTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGGACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTTTTTGCAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCgc                                                                                                                                                                                              >  1:5084/1‑250 (MQ=255)
                                                           ggCCGTTCTTGCAATCGCCGTCTGTACAACCGTCGGCTCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCt                                                                                                                                                                                   <  1:204726/251‑1 (MQ=255)
                                                           ggCCGTTCTTGCAATCGCCGTCGGGACAACCGTCGGCTCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCt                                                                                                                                                                                   <  1:418731/251‑1 (MQ=255)
                                                                              gTCGGGACAACCGTCGGCTCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTTTGGTCCCCC‑CAAAGTGCGGCTATGCGGGACTATCCACCGCCTTTCCGGGAAATAGCGCAGATTATGTTTATCTGAAAAAAGCCCGGAGCCGACCGCTGGCTTTCCTCTCCCGCTGGGGCAGCTTCTggggcaccgcgtcgcc                                                                                                                                                                >  1:150823/1‑238 (MQ=255)
                                                                                          gTCGGCTCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTTCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGAt                                                                                                                                                    <  1:439367/251‑1 (MQ=255)
                                                                                           tCGGCTCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTATATT‑TGATCCCCC‑AAATGTGCGTCTCTGCGGGACTATCCACCCCTTATCCGGGAAATTGCGGAGATTATGTTTTTCTGAAAAATGCCGGGAGCCCACCGCTGGCTTTTCTCTCCGGCTGGGCCCCCCTCTTGGCCAACGCTGCGCCCTCATTTTCGAtt                                                                                                                                                   >  1:611185/1‑251 (MQ=255)
                                                                                             ggctgcggtattgttgcatgtggtggTGAAGTGGCAAAAGCAGCGGGTCCGCCGTGGCTTACGGGGCTCGCGGTTGTCATTGGCGGG‑GTA‑ATTGTGATCCCGC‑AAATGGGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTAt                                                                                                                                                 <  2:23041/227‑1 (MQ=255)
                                                                                                tCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑GTA‑ATTTTGGTCCCGC‑AAATGTGGGTCTCTGCGGAACTATCCACCGCTTATCCGGGAAATAGCGCAGGTTTTGTTTTTCTGAAAAATGCCGGGAGCCGCACGCTGGGTTTCCTCTCCGGCTGGGCCAGCTTCTTGGCCCACGATGGGCCGTCCTTGTCggttttggg                                                                                                                                              >  1:305926/1‑243 (MQ=255)
                                                                                                 ccGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATgg                                                                                                                                               <  1:391380/249‑1 (MQ=255)
                                                                                                     tATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑GTA‑ATTGTGAACCCGC‑AAATGTGCGGCTATGCGGAACTATCCCCCGCTTTTCCGGAAAATAGCGCAGATTATGTTTATTTGAAAAATGCCGGAAGCCGACCCCTGGCTTTCCTTTCCGGCTGGGCCAGCTTCTGGGCCAAAGAGGCGCCGTCATTTTCGGTTATGGGGCTgg                                                                                                                                         >  1:602746/1‑251 (MQ=255)
                                                                                                      aTTTTTGTATCTGTTGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATTGCGCTGGc                                                                                                                                        <  2:57495/251‑1 (MQ=255)
                                                                                                                    gggTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGGCTATGCGGGACTATGCACCGCTTATCCGGGAAATAGCGCAGAATATGTTTTTCTGAAAAATGCCGGAAGCCCGCAGCCGGCCTTCCTCTCCGGCTGGGGCAGCTTCTGGGGCAACAATGCGCCGGCCTTGTCGATTATTGCGCTGGCGCTTGTCAGCacac                                                                                                                          >  2:147825/1‑248 (MQ=255)
                                                                                                                        gAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGGCGATTATGGCGCTGGCGATTGTCAGCAATCTTgg                                                                                                                      <  1:505192/251‑1 (MQ=255)
                                                                                                                          aGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGGGTTA‑AT‑GTGATCCCGC‑AAAAGTTCGTTCATGCGGAACTGTTCCCCGCTTATTCGGGAAAAAGCGGAGGATATTTTTATCTGGAAAAAGCCGGGAGCCGACCGCTTGCTTTCATCTCCGGCTGGGCCAGCCTCTTGGCCCACGATGCGGCGGCTTTTGCGATTATGGCGCTGGCGGTTGTTAGCACTCTTTGCt                                                                                                                    >  2:469482/1‑251 (MQ=255)
                                                                                                                                    gcagcGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAACGcc                                                                                                          <  2:311744/251‑1 (MQ=255)
                                                                                                                                      agcGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCGTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGa                                                                                                                                                                                                                  <  1:626156/145‑1 (MQ=255)
                                                                                                                                         gggCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAACGCCTATCg                                                                                                     <  1:243385/251‑1 (MQ=255)
                                                                                                                                          ggCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAACGCCTATCGa                                                                                                    <  1:51065/251‑1 (MQ=255)
                                                                                                                                             ccGCCGTGTCTTACGGTGCTCGCGTTTGTCATTTGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAACGCCTATCGATcc                                                                                                 <  2:305926/250‑1 (MQ=255)
                                                                                                                                               gCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑GTT‑ATTTTGGTCCCGC‑CAATGTGCGTCTATGCGGGACTAACCCCCGCTTTTCCGGAAAATAGCGCCGGTTATGTTTATTTGAAAAATGCCGGAAGCCGGCCCCTGGCTTTCCTCTCCCGCTGGGCCCGCTTCTGGGCCAACCAAGCGCCGGCCTTTTCGGTTATGGGGCTGGCGGTTGGCAGCCATCTTGGCTTTTTTACGCCTATctattcgc                                                                                               >  2:524707/1‑244 (MQ=255)
                                                                                                                                                        tACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAACGCCTATCGATCCGTTGCTCGGt                                                                                       <  2:5084/250‑1 (MQ=255)
                                                                                                                                                          cGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAAc                                                                                                             <  1:479759/226‑1 (MQ=255)
                                                                                                                                                                      ttGTCATTGGCGGG‑TTA‑AGTGTGATCCCGC‑AAATGGTCGTCTATGCGGATCTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCTATTATGGCGCTGGCGATTGGCAGCAATCTTGGCTTTTTAACGCCTATCTATCCGTTGCTCTGTAAATTTATcgccgc                                                                         <  1:455514/250‑1 (MQ=255)
                                                                                                                                                                       tGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAACGCCTATCGATCCGTTGCTCGGTAAATTTATCgccgcc                                                                        <  1:157197/250‑1 (MQ=255)
                                                                                                                                                                                cGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGCAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCATTCTTGGCTTTTTAACGCCTATCGATCCGTTGCTCGGTAAATTTATCGCCGCCGGattaatt                                                               >  1:55203/1‑250 (MQ=255)
                                                                                                                                                                                                     c‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGATGGCTTTCCTCTCCGGCGGGGCCAGCTTCTGGGCCAACGGTGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATTTTGGCTTTTTAACGCCTATCGATCCGTTGCTCGGTAAATTTATCGCCGCCGGATTAATTATCGCCTTTATGTTGCTaa                                            >  2:234418/1‑249 (MQ=255)
                                                                                                                                                                                                               gTCTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAACGCCTATCGATCCGTTGCTCGGTAAATTTATCGCCGCCGGATTAATTATCGCCTTTATGTTGCTACACCTGCGCTc                                  >  1:496492/1‑251 (MQ=255)
                                                                                                                                                                                                                 cTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCttt                                                                                                                  >  1:373990/1‑169 (MQ=255)
                                                                                                                                                                                                                 cTATGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCGGGCGATTGTCAGCAATCTTTGCttt                                                                                                                  <  2:373990/169‑1 (MQ=255)
                                                                                                                                                                                                                   aTGCGGAACTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTAGCTGAAAAATGGCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAACGCCTATCGATCCGTTGCTCGGTAAATTTATCGCCGCCGGATTAATTATCGCCTTTATGTTGCTACACCTGCGCTcc                                 <  2:71888/248‑1 (MQ=255)
                                                                                                                                                                                                                      cggaacgatcagccGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAAGGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCATCAATCTTGGCGTTTTAACGCCTATCGATCCGTTGCTCGGTAAATTTATCGCCGCCGGATTAATTATCGCCTTTATGTTGCTACACCTTCGCGCCTTTGaa                           <  2:375538/239‑1 (MQ=255)
                                                                                                                                                                                                                         aaCTATCCACCGCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAACGCCTATCGATCCGTTGCTCGGTAAATTTATCGCCGCCGGATTAATTATCGCCTTTATGTTGCTACACCTGCGCTCCGTTGAAggc                        >  2:147139/1‑251 (MQ=255)
                                                                                                                                                                                                                             aTCCACCGCTTATCCGGAAAAGAGCGCATTTTAGGTTTAACTGAAAAATGCCGGAAGCCGTACGCTGGCGTTCCTCGCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCTATTATGGCGCTGGCGATTGTCAGCAATCTTGCCTTTTTAACGCTTATCGAGCCGTTGCTCGGTAAAGTTATCGCCTCCGGATTAATGATCGTCTTTATGTTGCTTCACCTGCCCTCCGTTGAAtgcggc                     <  2:586227/250‑1 (MQ=255)
                                                                                                                                                                                                                                    gCTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAACGCCTATCGATCCGTTGCTCGGTAAATTTATCGCCGCCGGATTAATTATCGCCTTTATGTTGCTACACCTGCGCTCCGTTGAAGGCGGCGCAGCGtt             >  1:606727/1‑251 (MQ=255)
                                                                                                                                                                                                                                     cTTATCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGACAGCAATCTTGGCTTTTTAACGCCTATCGATCCGTTGCTCGGTAAATTTATCGCCGCCGGATTACTTAGCGCCTTTATGTTGCTACACCTGCGCTCCGTTGAAGGCGGCTCAGCGttt            >  2:474341/1‑251 (MQ=255)
                                                                                                                                                                                                                                        aTCCGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAACGCCTATCGATCCGTTGCTCGGTAAATTTATCGCCGCCGGATTAATTATCGCCTTTATGTTGCTACACCTGCGCTCCGTTGAAGGCGGCGCAGCGTTTCa          <  1:474707/250‑1 (MQ=255)
                                                                                                                                                                                                                                          ccGGAAAATAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAACGCCTATCGATCCGTTGCTCGGTAAATTTATCGCCGCCGGATTAATTATCGCCTTTATGTTGCTACACCTGCGCTCCGTTGAAGGCGGCGCAGCGTTTCAGa        <  2:143942/250‑1 (MQ=255)
                                                                                                                                                                                                                                               aaaTAGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGCCCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTATGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAACGCCTATCGATCCGTTGCTCGGTAAATTTATCGCCGCCGGATTAATTATCGCCTTTATGTTGCTACACCTGCGCTCCGTTGAAGGCGGCGCAGCGTTTCAGACGCTaa  <  2:455242/251‑1 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                      
GGACAAGAAAAAGGTATCGCTATGGGAAGCCAGGAACTCCAACGCAAGCTCGGATTTTGGGCCGTTCTTGCAATCGCCGTCGGGACAACCGTCGGCTCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGG‑TTA‑ATTGTGATCCCGC‑AAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATGGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAACGCCTATCGATCCGTTGCTCGGTAAATTTATCGCCGCCGGATTAATTATCGCCTTTATGTTGCTACACCTGCGCTCCGTTGAAGGCGGCGCAGCGTTTCAGACGCTAA  >  NC_000913/3499889‑3500375

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑