Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 3,256,301 | G→A | S117S (TCC→TCT) | cyuA ← | putative L‑cysteine desulfidase CyuA |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,256,301 | 0 | G | A | 97.4% | 216.7 / ‑5.9 | 76 | S117S (TCC→TCT) | cyuA | putative L‑cysteine desulfidase CyuA |
Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (36/38); total (37/39) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01 |
CAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGAAACCCAGGCTTCTACACGTTCAACCGGACCTTCCAGTTCTGCCGCAGCAACCG > NC_000913/3256057‑3256539 | cAAACGGGACTTCATTGACGAACGTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACt < 2:69054/251‑1 (MQ=255) cGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGTGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTcc > 1:359597/1‑251 (MQ=255) gggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTCACAGAGACTTTccc > 1:514893/1‑251 (MQ=255) ggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTcccc < 2:36021/251‑1 (MQ=255) cATTGACGAACTTCAGGATCTAAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTG‑CTCGCACTCTGCCACACACGCCTGCTGGGTACACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCgccgcc > 2:613697/1‑251 (MQ=255) aCGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACCCCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGAGCTTAACAGAGACTTTCCCCGCCGCcagcag < 1:195600/251‑1 (MQ=255) tCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACCCCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCTTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCtt < 1:600743/249‑1 (MQ=255) cAGGATCTCAGCCAGCGGCGTTCTGGAAAGCCCCGTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATAGGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCTTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTgg < 1:376397/251‑1 (MQ=255) ggATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGc > 1:53628/1‑250 (MQ=255) gaactcagcctgcgccgtcagggAAAGCCCCGTCAGCGGAGCCT‑TTGTCCAGCCCTCTGCCACACCCGCCTGCGGGGTAAACACCCCACCACCGTGCGTCTCGTTATGCACAATGTTGGTATCC‑CCGCCGACGATGGTGACACACGCCCACTTCTCCCCGTTCCAGAC‑TT‑GGGCGCTTGAGAACAGTATTTCATCGCA‑‑GGTTACC‑TGGATCTGAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCAt < 2:73773/230‑1 (MQ=255) gATCTCAGCCAGCGTCGTTCTGGAAAGCACTGTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGAAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGA‑CCGCCGACGCTGGTGACACACGCCCACTTCTCACCGTTACAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTcccc > 1:576721/1‑229 (MQ=255) gATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑GGGCGCGTGAGAAGAGGATTTCATCGCA‑ATGTT‑CC‑TGGAGCTTAGCAGAGACGTTcccc < 2:576721/229‑1 (MQ=255) tcAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGc > 1:77176/1‑251 (MQ=255) cagccagcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACCCCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCgg < 1:199396/249‑1 (MQ=255) agcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGc > 2:1249/1‑251 (MQ=255) gtcgtTCTGGAAAGCACCTTCAGCGGAGACTCTTG‑CTCGCCCCCGGCCACCCACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTg < 1:347630/251‑1 (MQ=255) ggAAAGCCCCGTCAGGGGAGACTCTTC‑CTCGCCCTCTGCCACACCCGCCTGCTGGGTAAACCCCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCCCTTCTCCCCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTg < 2:154150/251‑1 (MQ=255) gCACCGTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCt > 1:118908/1‑251 (MQ=255) acACCGTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACACTGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCt > 2:28007/2‑251 (MQ=255) cgcaaGCGGAGCCTCTGT‑CTCGCCCTCTGCCACACCCGCCTGCGGGGTAAACCCCACCCCATCGTGCGGCCCGATATGCACAATGTTGGTAGGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCa < 2:257465/247‑1 (MQ=255) gTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTc > 1:529912/1‑249 (MQ=255) gTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGATAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGAGACACACGCCAACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTc > 1:254800/1‑249 (MQ=255) cGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACtt > 1:318942/1‑251 (MQ=255) ggtgacgctTG‑CTCGCCCTCTGCAACCCCCGCCCGCGGGGTAAACACCACCCCATCGCGCGTCCCGTGATGCACAATGTTGGTA‑GCTCCGCCGACGAGGGTGACACACTCCCGCTTCTCACCGTCACAGGC‑TT‑GGGCGCGGGAGAAGAGGATTCCAGCGCA‑AGGGT‑CC‑TGGCGCGTAACAGAGTCTGTTCGCGTCGTCTGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTAGCGTCTTTCATCACTTc < 2:289323/244‑1 (MQ=255) ggtctctTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCCCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCCCCGTTCCAGAT‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCa < 1:52353/248‑1 (MQ=255) gagaccctggcccGCCCTCCGCCACACACGCCTGGTGGGTAAACCCCTCCCCACCGGGCGGCTCAATATGCCCATGGGTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGCC‑TT‑GGGCGCGTGAGAAGAGGATTTCAGCGCA‑AGGTT‑CC‑TGGATCTAAACAGAGACTTCCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTcc < 2:128585/239‑1 (MQ=255) tctTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGccc > 1:608521/1‑251 (MQ=255) tctTG‑CTCGCCCTCTGCCACACACGACTGCTGGGTAAACACCACACCATCGTGCGTCTAGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACAAGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTCACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGccc > 2:563886/1‑251 (MQ=255) tctTG‑ATCGCCCTCTGCCACACACGACTGCTGGGTAAACACCACACCATCGTGCGTCTCGCTATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGCGAAGAGGATTTCATCGCA‑CGGTT‑CC‑TGGATCTTAACAGAGCCTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGccc > 2:611476/1‑251 (MQ=255) tctGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCAtt > 1:99362/1‑251 (MQ=255) cctGCCACCCACTCCTTCTGGGTAAACCCCACCCCTACGTGCGTTTCGATATGCACAATGTGGGTAGGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTCCCAGAT‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCAtt < 2:234680/250‑1 (MQ=255) cacacaCGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCAc > 2:376340/1‑251 (MQ=255) gctgGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGcccc < 1:552245/250‑1 (MQ=255) tgGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTc > 2:526765/1‑215 (MQ=255) tgGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTATGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTc < 1:526765/215‑1 (MQ=255) ggtaacacccaccccatctggCGTCTGGATATGCACAATTTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGCCTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTGCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAgcg < 2:629534/231‑1 (MQ=255) cccccaTCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAT‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTACCAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCAGCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAAt < 1:613697/248‑1 (MQ=255) caccaTCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATc > 1:34946/1‑251 (MQ=255) atGCACAATTTTGGTATGC‑CCTCCGTCGATGGTGACCCACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGTTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCg < 1:94308/251‑1 (MQ=255) gCACAATGTGGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTg < 1:28007/251‑1 (MQ=255) ccattgttgttaggtccgcggACGATGGTGACCCACGCCCCCTTCTCACCGTTC‑AGACCTT‑TGGCGCGTGAGAAGAGGTTTTCACCGCA‑AGGTT‑CC‑TGGATCTAAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCGAACGCCCCCCGCGCCGCCGCAATCGGCAGCCCCACCATGCCCGTGcc < 1:147695/236‑1 (MQ=255) aaTGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCCTTCCCGTGCCgg > 2:132709/1‑251 (MQ=255) tGGTATGC‑CCGCCGACGATGGTGACAAACCCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTACCAGAGACTTTCCCCGCCGCCAGCAGTGCTTTCGCATCGGCAATTGCCTGCGCTGCTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTCACGCCCCCAGCGCCGCCGCAATCGGCAGACCCACCATTCCCGTCCCGGGAACg > 2:413286/1‑251 (MQ=255) ggtagcc‑ccGCCGCCGGTGGTGACACACGCCCACTTCCCCCGGTGCCAGTC‑TT‑TGGCGCGTGAAAAGAGGATTTCTTCGCA‑AGGTT‑CC‑TGGTTCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCATCCCGGCGGTGGCATTTCCACCTAACGCCCCGAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACgg < 1:563886/245‑1 (MQ=255) gTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACggg > 1:495119/1‑250 (MQ=255) tGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGAc > 1:47296/1‑251 (MQ=255) cgacgaTGGTGCCACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGcccc < 2:348798/193‑1 (MQ=255) cgacgaTGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGcccc > 1:348798/1‑193 (MQ=255) cgaTGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATGCCCGTGCCGGGAACGGTGACGCCCAGACCg < 1:500112/251‑1 (MQ=255) gTGACACACGCCCACTTCTCACCTTTCCAGTC‑TT‑GGGCGCGTGAGAATAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGTTGACGCCCAGACCGttctt < 2:53628/251‑1 (MQ=255) tGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGttcttc > 1:613470/1‑251 (MQ=255) cacacGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTtcatc > 1:246396/1‑251 (MQ=255) acacGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTtcatc > 1:288272/1‑250 (MQ=255) cGCCCACTTCTCACCGTGCCAGTC‑TT‑GGGCGCGTGAGAAGAGGATTTCATCGCA‑AGTTT‑CC‑TGGATCTTAACAGAGACTTCCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGCCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTACCGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTTTTCATCAGAt < 1:166812/251‑1 (MQ=255) ccACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTg > 1:62440/1‑251 (MQ=255) tctcACCGTCCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCg < 1:436091/249‑1 (MQ=255) ctcACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGaa > 2:545509/1‑250 (MQ=255) cACCGTTCCAG‑C‑TTGTGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGCCTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGaa < 2:608521/248‑1 (MQ=255) ccccgttcaatacttggtcgcgTGAGAAGAGGTTTTCA‑CCCAGAGTTT‑CC‑GGGATCTAAACAGAGCCTTCCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATGGCCGGCGCTTTTGCGTCTTTCAGCACTGCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCAGCAGATTTGGCgtatcc < 2:33745/233‑6 (MQ=255) ccAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGAAACCCAGGCtt > 1:182940/1‑251 (MQ=255) c‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGTTT‑CC‑TGGATCTTAACAGAGCCTTTCCCCGCCGCCAGCAGTGCTGTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCg < 2:597170/128‑1 (MQ=255) c‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCg > 1:597170/1‑128 (MQ=255) tt‑tGGCGCGTGAGAAGAGGTTTTCATCGCA‑AGTTC‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTTTTGCGTCTTTCAGCTCTTCCAGCCCGGCGTGGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGAAACCCAGTCGTCTac < 2:613470/249‑1 (MQ=255) ttgggCGCGTGAGAAGAGGATTTCACCGCA‑‑GGTT‑CCCTGGATCTTAACAGAGCCTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGGTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGAAACCCAGGCTTCTaca < 2:194664/247‑1 (MQ=255) ggCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGAAACCCAGGCTTCTACACGt < 1:376340/250‑1 (MQ=255) tgaaaagaGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACGGAGACTTTACCCGCCTCCAGCAGTGCTTTAGAATCGGCAATTGCCTGCGCTGTTGCGACTTTCCGCACTTCCCGCACGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCCGCCCCACCATTACCGTGCCGGACACGGGGACGCCCAGACCGTTCTTCCTCCGCTTTGGCGAAACCCAGGCTTCTACACGTTCAACCg > 1:365260/5‑251 (MQ=255) gagaAGAGGTTTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGCCTTCCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGAAACCCAGGCTTCTACACGTTCAACCgg < 1:551495/251‑1 (MQ=255) aaagtggATTTCACCGCA‑AGGTC‑CC‑TGAATTTTAACAGATCCTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCTTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGAAACCCAGGCTTCTACACGTTCAACCGGAc < 2:580403/246‑1 (MQ=255) ggATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGCAACCCAGGCTTCTACACGTTCAACCGGACCTTcc > 1:144094/1‑251 (MQ=255) gATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGAAACCCAGGCTTCTACACGTTCAACCGGACCTTcc > 2:14265/1‑250 (MQ=255) cATCGCA‑AGGTT‑CC‑TGGATCTTACCAGAGCCTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCCCTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGAAACCCAGGCTTCTACACGTTCAACCGGACCTTCCAGTTc < 1:91117/250‑1 (MQ=255) aGGTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGAAACCCAGGCTTCTACACGTTCAACCGGACCTTCCAGTTCTGCCgcag < 1:1249/251‑1 (MQ=255) gTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGAAACCCAGGCTTCTACACGTTCAACCGGACCTTCCAGTTCTGCCgcagca < 1:132709/251‑1 (MQ=255) gTT‑CC‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGAAACCCAGGCATCTACACGTTCAACCGGACCTTCCAGGTCTGCCgcagc > 2:607999/1‑250 (MQ=255) t‑CC‑TGGATCTTAACAGAGACTTTCCCCGACGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGAAACCCAGGCTTCTACACGTTCAACCGGACCTTCCAGTTCTGCCGCAGCAAc > 1:451459/1‑251 (MQ=255) c‑TGGATCTTAACAGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGAAACCCAGGCTTCTACACGTTCAACCGGACCTTCCAGTTCTGCCGCAGCAAccc > 2:503412/1‑250 (MQ=255) | CAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTG‑CTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGC‑CCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGAC‑TT‑TGGCGCGTGAGAAGAGGATTTCATCGCA‑AGGTT‑CC‑TGGATCTTAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCATTTCCACCTAACGCCCCCAGCGCCGCCGCAATCGGCAGCCCCACCATTCCCGTGCCGGGAACGGTGACGCCCAGACCGTTCTTCATCAGATTTGGCGAAACCCAGGCTTCTACACGTTCAACCGGACCTTCCAGTTCTGCCGCAGCAACCG > NC_000913/3256057‑3256539 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |