| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,965,617 | C→T | A141T (GCC→ACC) | lgt ← | phosphatidylglycerol‑‑prolipoprotein diacylglyceryl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,965,617 | 0 | C | T | 96.9% | 198.2 / ‑6.2 | 64 | A141T (GCC→ACC) | lgt | phosphatidylglycerol‑‑prolipoprotein diacylglyceryl transferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (27/35); minor base G (0/2); total (27/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.04e-01 | |||||||||||
GGGCGTGGTTTACGAATATACAGGTTGAGGATAATAAACAGCACCACACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCA‑GACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGA > NC_000913/2965370‑2965856 | gggCGTGGTTTACGAATATACAGGTTGAGGATAATAAACAGCACCACACCTTACAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCGCACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGATTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGAGAACAGCAAGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTAACCGTTAATAAAGTTGCCCAGCCGCCCGGTAcc > 1:89679/1‑251 (MQ=255) gCGTGGTTTACGAATATACAGGTTGAGGATAATAAACAGCACCACACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCa > 1:240035/1‑250 (MQ=255) cGTGGTTTACGAATATACAGGTTGAGGATAATAAACAGCACCACACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCa > 1:468698/1‑249 (MQ=255) gTGGTTTACGAATATACAGGTTGAGGATAATAAACAGCACCACACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCa > 1:208812/1‑248 (MQ=255) ggTTTACGAATATACAGGTTGCGGATAATAACCAGCACCACACCCTCCAGCAGAAGCTCGTAAAGCTGTGATGGGAGGCGCGGCAGCACACCGTACGTGTCGAAAATGGATTGCCACTGCGGGATGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAACCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCACCGCGGCCACACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGAcc > 1:39223/1‑251 (MQ=255) ggTTTACGAATATACAGGTTGAGGATAATAAACAGCACCACACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGAcc < 1:553466/251‑1 (MQ=255) gTTTACGAATATACAGGTTGAGGATAATAAACAGCACCACACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGCCGCCCGGTACCAAGAcc > 2:505712/1‑250 (MQ=255) aCGAATATACAGGTTGAGGATAATAAACAGCACCACACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAAc < 1:345881/250‑1 (MQ=255) atatACAGGTTGAGGATAATAAACAGCACCACACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAAt < 1:586370/251‑1 (MQ=255) cAGGTTGAGGATAATAAACAGCACCACACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGCTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGATACCAAGACAACACGGAATGAgtg > 2:23777/1‑251 (MQ=255) aGGTTGAGGATAATAAACAGCACCACACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAgtgg < 1:437329/251‑1 (MQ=255) gTTGAGGATCATAAACAGCACCACACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAgtggtg > 2:44262/1‑251 (MQ=255) attgcggATAATAAACAGCACCACACCTTCCAGCCGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCCGCAAACCGTAAGTGCCGAAAATGCATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCACCGCGGCCCCCCAATCCACCGGTAATAAAGTTGCCCCGACGCCCGGTACCAAGACCAAACgggattcgtggtg > 2:102582/6‑240 (MQ=255) tGAGGATAATAAACAGCACCACACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAgtggtgt < 2:14167/250‑2 (MQ=255) ataataAACAGCCCCACACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATaaa < 2:423617/251‑1 (MQ=255) ataataAACAGCACCACCCCTTCCAGCAGCAGCTCGGAAAGCTGTGATGGGTTGCGCGGCAGCAATCCGTAAGTGTCGAAAATGGAGTGCCACTGCGGGTTGGTTTGCAGCATCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGGACCAAGACCATACGGAATGAGTGGTGCGATaaa < 2:414703/251‑1 (MQ=255) taataaACAGCACCACACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTAACCGTTAATAAAGTTGCCCAGCCGCCCGGTACCAAGACCAAACGGAATGGGTGGTGCGATaaa > 1:366995/1‑250 (MQ=255) aaaCAGCACCACCCCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTGCGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGGCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGGGGTGCGATAAAATCa < 2:271049/250‑1 (MQ=255) caccacACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCt < 1:137207/251‑1 (MQ=255) caccacACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAACCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCt > 1:27809/1‑251 (MQ=255) accacACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGGGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTAACCGTTAATAAAGTTGCACAGACGCCCGGTACCAAGACCAAACGGAATGAGAGGAGCGATAAAATCAGAGACCTg > 1:621433/1‑251 (MQ=255) cacaCCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTgg > 1:255233/1‑250 (MQ=255) gcagcagcTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGt < 1:328964/251‑1 (MQ=255) gcagcagcTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGATGGTTTGCAGCAGCAAAATATCTTCTGTAAGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTAACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGt > 1:20058/1‑251 (MQ=255) gcTCGTAAAGCTGAGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGt > 1:457128/1‑250 (MQ=255) gTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTAcggc > 1:609679/1‑251 (MQ=255) aaaGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTAcggcgg < 1:506907/251‑1 (MQ=255) gCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAAGGGAGTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGGTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACggcgggcg < 1:432939/251‑1 (MQ=255) gcgGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAACCAGGGAACAGCATGGCAAACGGGAAGATCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTAcggcggtggaaaaaaaaaataacc > 1:33529/1‑233 (MQ=255) cacaCCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGGAGA‑AAATAAAcaccacccta > 2:308814/1‑246 (MQ=255) aGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑AAatcattacacacataaagccactc > 2:73533/1‑231 (MQ=255) gtgcGAAAAGGGATTGCCAGTGCGGGTTGGTTAGCAGACGCAAAATATCTTCTGTACTGGAGCCAGGGAACAGCATGGCAAACGGGAAGGTCGGGTCAACTCGGCCCCACAATTATCCGTTAATAAAGTTGCTCAGACGCCCGGGACCAAGACCAAAAGGAATGAGCGTTGTGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATACCGCACATCAgg < 2:68777/248‑1 (MQ=255) cGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGgccg < 2:225976/251‑1 (MQ=255) cGAAAATGGATTGCCACGGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGgccg < 2:523646/251‑1 (MQ=255) aaaaTGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGgccgcc < 1:336298/251‑1 (MQ=255) ggATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTgg < 2:609679/250‑1 (MQ=255) gCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATgc < 2:408810/249‑1 (MQ=255) ggttTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTcc < 1:519819/250‑1 (MQ=255) gttTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCa < 1:123903/251‑1 (MQ=255) tgccgcagcaAAATCTCGTCTGTGCGGGAGACAGGGAACAGCACGGCAAACTGGAAGTGCGGGTCAACGCGGCCCCACAATTCACCGTTAACAAAGTTGTCCAGACGTCCGGTACCAAGAGCATACGTAATGAGGGGTGCGATAAACTCAGAGTCCTGGAAGAAGGAACGTTTAGCACGGCGGGCGAAGA‑TACCCACCCCCACGATAACCCGAATCAGGCCGTCGCGGCAATACATGCCGCCGTCACA‑Ga < 2:266380/246‑1 (MQ=255) gcagcagcaAAATATCTTCTGTACGGGAGCCAGTGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCTATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCA‑Gaca < 1:617061/251‑1 (MQ=255) aaTATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAAACATCCCCACACTAAAGCCAATCAGGCCGCCGCGGAAAGAAATtccgccccaccacacacggcacaga > 1:84314/1‑231 (MQ=255) atatCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGa > 1:226466/1‑155 (MQ=255) agagcgtctGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTGCGGGTCAACGCGGCCCCACAAGTCACCTTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGa < 2:226466/149‑1 (MQ=255) ttctGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACACCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGTCGAAGA‑TAATCATCACCACGATAACGCCCAACAGGCCGCCCTGGGAAGACATGCCGCCGTccccgccaacgcaaccaaacaacg > 1:292335/1‑230 (MQ=255) tGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAAA‑TAATCATCACCAAGATAAAGCCAAACAAGCCGCCGCGGGAAGACATGCCCACGTCCCC‑AACAAGGAACAGATaaagagggg > 1:530749/1‑243 (MQ=255) ggaCGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAACTCACCGTTAATAAAGGTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCTTGGAAAGACATGCCGCCGTCCCA‑GACACGGAACAGATACAGCgg < 2:622234/246‑1 (MQ=255) gAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGGCCCA‑GACACGGAACAGATACAGCGGATCGGCCAt < 2:292335/251‑1 (MQ=255) aCAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGATGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTCCGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCA‑GACACGGAACAGATACAGCGGATCGGCCATAAACAGCggg < 2:279761/251‑1 (MQ=255) cAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCA‑GACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGa < 1:150957/251‑1 (MQ=255) cATGGCAAACGGGAAGTTCGGGCCAACGCGGCCCAACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCAGCACCACGATAACGCAAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCA‑GACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAAt < 2:33529/251‑1 (MQ=255) ggCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCA‑GACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTg < 2:45031/250‑1 (MQ=255) gggAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGAGAAATC‑TCACCACGATAACGCCAATCAAGCCCCCGGGGGAAAACATGGCCCACTCCCACGA‑ACGGAACAGATACACCCGATCGGACGTAAAcacaggggaaatgtaggaca > 1:333253/1‑231 (MQ=255) ggAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCA‑GACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTagaacaga < 1:219050/251‑1 (MQ=255) ggAAGTTCGGGGCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCCGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGTCCTGGAAGAAGGAACGTTTAGTACGGCGCGCAAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGTCGCGGAAAGACACGCCGCCGTCCCA‑GACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTagaacaga < 1:606625/251‑1 (MQ=255) gAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCA‑GACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTagaacagaa < 1:44262/251‑1 (MQ=255) aaGTTCGGGTCAACGCGGCCCAACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCA‑GACACGGAACAGATACAGCGGAGCGGCCATAAACTGCGGGAAATTGTagaacagaac < 2:209329/251‑1 (MQ=255) aaCGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCA‑GACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATAc < 1:470321/251‑1 (MQ=255) cacaATTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGCGGAAAAACATGCCGCCGGCCCA‑GACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATAAGTCCCCCg > 1:45172/1‑249 (MQ=255) aTTCACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCA‑GACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAg < 2:2051/251‑1 (MQ=255) cACCGTTAATAAAGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCA‑GACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGAc < 1:308814/250‑1 (MQ=255) aaaGTTGCCCAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑AAATCATCACCACGATAAAGCCAAACAAGCCGCCGTGGGAAAACATGCCGCCGCCCCC‑GACAAGGGACAGATACAGCGGCACGGCCCTAAACAGCGGGGAAATGTAGAACAGAAAATAAACCATAAGTCCCCCCAGGAAGACGCCGAGGGAGc > 1:299732/1‑251 (MQ=255) cAGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCA‑GACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATaga < 2:530749/251‑1 (MQ=255) aGACGCCCGGTACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGAGGAGA‑GAATCATTACCCCGAAAACGCCAAACAGGACGCCGGGGGAAGACATGACGCCGGCCCA‑GAAACGGAACAGAGACAGCGGGTCGGCCATAAAATGCGGGAAATTGTAGAAAAAAAAATAAACAAAACGCCCCCCGAGGAAGAAGCCGAgggaaaccgcacag > 1:251578/1‑237 (MQ=255) | GGGCGTGGTTTACGAATATACAGGTTGAGGATAATAAACAGCACCACACCTTCCAGCAGCAGCTCGTAAAGCTGTGATGGGTGGCGCGGCAGCACACCGTAAGTGTCGAAAATGGATTGCCACTGCGGGTTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGA‑TAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCA‑GACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGACGCCGAGGAAGCCCGCATAGA > NC_000913/2965370‑2965856 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |