Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,253,002 C→T intergenic (+17/+83) dhaR → / ← ycgV DNA‑binding transcriptional dual regulator DhaR/putative autotransporter adhesin YcgV

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,253,0020CT100.0% 108.3 / NA 38intergenic (+17/+83)dhaR/ycgVDNA‑binding transcriptional dual regulator DhaR/putative autotransporter adhesin YcgV
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (12/26);  total (12/26)

AACATCTGTTTACCGAGCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTCTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACTGTACTTCT  >  NC_000913/1252762‑1253239
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                              
aaCATCTGTTTACCGAGCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGGAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGGAAATGAAGCAACATGGCATTGGTGCAGGGCAGTTTAAGCGCCGGGTATTAAAAACCGAAAAGATTTTTGATACATc                                                                                                                                                                                                                                       >  1:484392/1‑250 (MQ=255)
             cGAGCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGCCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGGAAATGAAACAAAATGGCATTGATGCAGGGCAGTTTAAACGCCGGGGATGAAAAACAGAAACGATTTTTGATAAATCAGAGCGATCTGTAt                                                                                                                                                                                                                        >  1:377988/1‑251 (MQ=255)
                 cAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCa                                                                                                                                                                                                                    <  1:10881/251‑1 (MQ=255)
                  aGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAGCGATTTTTGATACATCAGAGTGATCTGTAGTTCAt                                                                                                                                                                                                                   <  1:176444/251‑1 (MQ=255)
                             gatgccggcgcCCCCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATTCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACg                                                                                                                                                                                                        <  1:355377/244‑1 (MQ=255)
                                gTCAGCGCCCCCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTa                                                                                                                                                                                                     <  2:382846/251‑1 (MQ=255)
                                     cgcCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAAt                                                                                                                                                                                                <  2:133589/251‑1 (MQ=255)
                                                 ttCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACGTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATc                                                                                                                                                                                      <  2:188761/249‑1 (MQ=255)
                                                   ccagcaGTCTGTCATGTGCGGAAGTGGAAAAAGAGGCAATTATTGACTCAGCCCAGGTCACAGGCGGGCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGTCAGTTTAAGCGTCGGGTATGAAAGACAGAAACGAAGTTTGATACATCAGAGTGATCTGTATTTCAGTCCGGCGCGCGCTAACAATGGACAGCATCGttt                                                                                                                                                                                  <  2:366058/247‑1 (MQ=255)
                                                                aTTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATGCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTa                                                                                                                                                                     <  1:573181/251‑1 (MQ=255)
                                                                aTTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATGCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCTTTTAAGGGCTTGTCTa                                                                                                                                                                     <  1:511329/251‑1 (MQ=255)
                                                                  ttGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTAt                                                                                                                                                                    <  1:419221/250‑1 (MQ=255)
                                                                                aaaGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGc                                                                                                                                                     <  1:450418/251‑1 (MQ=255)
                                                                                 aaGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGAACTACGCTGGGGGGGGAAATGAAGCCACATGGCATTGGTGCCGGGCAGTTTACGCGCCGGGTATGAAAGGCAGAAAAGATTTTTTTTACATCAGGAGGATCTGTATTTTCTTCCGGCGCCCGCTAACCATTTTCAGCATCGTTTAAGGGCTTGTCTCTccccccctttaaacct                                                                                                                                                    >  1:283502/1‑238 (MQ=255)
                                                                                  agagGCAATTATTAACGCAGCCCAGGACACAGGCGGTCGCATTCAGGAAATGTCGGCGTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGGATTTCATTCCGGCGCACGCTAACAATGTTCAGCATCGTGTAAGGGCTTGTCTATCCCGCACTTAAAAGCTg                                                                                                                                                   <  2:79271/251‑1 (MQ=255)
                                                                                      gCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAAAGTCGGCTTTACTTTGGATCGGCCGCACTACGCTGTGGGGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCCGGGCTGAAAGACAGAAACGATTTTTGATACAACCGAGGGATCTGTATTTTATTTCGGCGCCCGCTAAAAAATTTTAGCATCGTTTAAAGGCTTTTCTATCCCGCACTTAAAAGCTGAAgg                                                                                                                                               >  1:266353/1‑250 (MQ=255)
                                                                                                aCGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGTCAGTTTAAGCGCCTGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCGTGTCTATCCCGCACTTAAAAGCTGAAGCGATAtcctcc                                                                                                                                     <  2:60442/251‑1 (MQ=255)
                                                                                                  gCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGt                                                                                                                                   <  1:436104/251‑1 (MQ=255)
                                                                                                                aGGCGGTCGCATTCAGGAAATGGCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGGATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAAGTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTGGACTTGCTTCTGa                                                                                                                     <  2:143313/251‑1 (MQ=255)
                                                                                                                 ggCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGAGATCTGTATTTCATTCCGGCGCACGCTAACCATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTTACTTGCTTCTGAt                                                                                                                    >  1:314809/1‑251 (MQ=255)
                                                                                                                    ggTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCCCTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCa                                                                                                                  >  2:434146/1‑250 (MQ=255)
                                                                                                                                            ttACTTGGGATCGGCCGCACTACGCTTTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGAGCTGTAGTTCATTCCGGCGCACGCTAAGAATTTGCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATAAAAGAGGTTACCCTGCGTGTAATc                                                                                           <  2:157479/249‑1 (MQ=255)
                                                                                                                                                 ttggATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCt                                                                                       <  2:168894/246‑1 (MQ=255)
                                                                                                                                                 tGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATGGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTc                                                                                     <  2:220875/250‑1 (MQ=255)
                                                                                                                                                     aTCGGCCGCAGTACGCTGTGGCGGAAAATGAAGCAACATGGAATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGAt                                                                                <  2:493926/251‑1 (MQ=255)
                                                                                                                                                        ggCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGtt                                                                                                                                                                                   <  1:479654/149‑1 (MQ=255)
                                                                                                                                                        ggCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGtt                                                                                                                                                                                   >  2:479654/1‑149 (MQ=255)
                                                                                                                                                           cGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGAGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAAtg                                                                          >  1:77434/1‑251 (MQ=255)
                                                                                                                                                                 aCGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTTCGTGTAATCCGCTTCGAGATAGAATGTGTGc                                                                     <  1:582455/250‑1 (MQ=255)
                                                                                                                                                                     tgaggCGGAAATAGAAGCAACATGGCATTGATGCCGGTCAGGTTAATCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGCGTGATCTGTATTTCAGTCCGGCGCACGCTAACAATTTTCCGCATCGTTTAAGGGCTTGTCTATCCCGCACTTTAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGCTCCAAGAGGTTACCCTGCGTGTAATCCGCCTCGAGATAGCATGTGTGCtgttt                                                                >  2:484149/4‑251 (MQ=255)
                                                                                                                                                                               aaTGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACtgt                                                      <  2:132235/251‑1 (MQ=255)
                                                                                                                                                                               aaTGAAGAAATATGGAATTGAAGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATTCATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCATCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACtgt                                                      <  2:306832/251‑1 (MQ=255)
                                                                                                                                                                                                 tGATGCAGGGCAGTTTAAGCGCCGGGTAGGAAAGACAGAAACGATTTTTGATACATCAGAGTTATCTGTATTGCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGcc                                     <  1:601670/250‑1 (MQ=255)
                                                                                                                                                                                                      cAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTAtt                               >  1:508213/1‑251 (MQ=255)
                                                                                                                                                                                                           cAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGc                          >  1:182368/1‑251 (MQ=255)
                                                                                                                                                                                                                   gcgcCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCt                  <  1:434146/251‑1 (MQ=255)
                                                                                                                                                                                                                           tATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACt          >  2:451989/1‑251 (MQ=255)
                                                                                                                                                                                                                                   aCAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACTGTACTtct  <  1:476784/251‑1 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                              
AACATCTGTTTACCGAGCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTCTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACTGTACTTCT  >  NC_000913/1252762‑1253239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: