Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,253,002	C→T	intergenic (+17/+83)	dhaR → / ← ycgV	DNA‑binding transcriptional dual regulator DhaR/putative autotransporter adhesin YcgV

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,253,002	0	C	T	100.0%	108.3 / NA	38	intergenic (+17/+83)	dhaR/ycgV	DNA‑binding transcriptional dual regulator DhaR/putative autotransporter adhesin YcgV
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (12/26);  total (12/26)

AACATCTGTTTACCGAGCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTCTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACTGTACTTCT  >  NC_000913/1252762‑1253239                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                               aaCATCTGTTTACCGAGCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGGAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGGAAATGAAGCAACATGGCATTGGTGCAGGGCAGTTTAAGCGCCGGGTATTAAAAACCGAAAAGATTTTTGATACATc                                                                                                                                                                                                                                       >  1:484392/1‑250 (MQ=255)              cGAGCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGCCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGGAAATGAAACAAAATGGCATTGATGCAGGGCAGTTTAAACGCCGGGGATGAAAAACAGAAACGATTTTTGATAAATCAG‑AGCGATCTGTAt                                                                                                                                                                                                                        >  1:377988/1‑251 (MQ=255)                  cAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCa                                                                                                                                                                                                                    <  1:10881/251‑1 (MQ=255)                   aGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAGCGATTTTTGATACATCAG‑AGTGATCTGTAGTTCAt                                                                                                                                                                                                                   <  1:176444/251‑1 (MQ=255)                              gatgccggcgcCCCCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATTCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACg                                                                                                                                                                                                        <  1:355377/244‑1 (MQ=255)                                 gTCAGCGCCCCCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTa                                                                                                                                                                                                     <  2:382846/251‑1 (MQ=255)                                      cgcCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAAt                                                                                                                                                                                                <  2:133589/251‑1 (MQ=255)                                                  ttCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACGTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATc                                                                                                                                                                                      <  2:188761/249‑1 (MQ=255)                                                    ccagcaGTCTGTCATGTGCGGAAGTGGAAAAAGAGGCAATTATTGACTCAGCCCAGGTCACAGGCGGGCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGTCAGTTTAAGCGTCGGGTATGAAAGACAGAAACGAAGTTTGATACATCAG‑AGTGATCTGTATTTCAGTCCGGCGCGCGCTAACAATGGACAGCATCGttt                                                                                                                                                                                  <  2:366058/247‑1 (MQ=255)                                                                 aTTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATGCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTa                                                                                                                                                                     <  1:573181/251‑1 (MQ=255)                                                                 aTTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATGCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCTTTTAAGGGCTTGTCTa                                                                                                                                                                     <  1:511329/251‑1 (MQ=255)                                                                   ttGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTAt                                                                                                                                                                    <  1:419221/250‑1 (MQ=255)                                                                                 aaaGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGc                                                                                                                                                     <  1:450418/251‑1 (MQ=255)                                                                                  aaGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGAACTACGCTGGGGGGGGAAATGAAGCCACATGGCATTGGTGCCGGGCAGTTTACGCGCCGGGTATGAAAGGCAGAAAAGATTTTTTTTACATCAGGAG‑GATCTGTATTTTCTTCCGGCGCCCGCTAACCATTTTCAGCATCGTTTAAGGGCTTGTCTCTccccccctttaaacct                                                                                                                                                    >  1:283502/1‑238 (MQ=255)                                                                                   agagGCAATTATTAACGCAGCCCAGGACACAGGCGGTCGCATTCAGGAAATGTCGGCGTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGGATTTCATTCCGGCGCACGCTAACAATGTTCAGCATCGTGTAAGGGCTTGTCTATCCCGCACTTAAAAGCTg                                                                                                                                                   <  2:79271/251‑1 (MQ=255)                                                                                       gCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAAAGTCGGCTTTACTTTGGATCGGCCGCACTACGCTGTGGGGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCCGGGCTGAAAGACAGAAACGATTTTTGATACAACCG‑AGGGATCTGTATTTTATTTCGGCGCCCGCTAAAAAATTTTAGCATCGTTTAAAGGCTTTTCTATCCCGCACTTAAAAGCTGAAgg                                                                                                                                               >  1:266353/1‑250 (MQ=255)                                                                                                 aCGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGTCAGTTTAAGCGCCTGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCGTGTCTATCCCGCACTTAAAAGCTGAAGCGATAtcctcc                                                                                                                                     <  2:60442/251‑1 (MQ=255)                                                                                                   gCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGt                                                                                                                                   <  1:436104/251‑1 (MQ=255)                                                                                                                 aGGCGGTCGCATTCAGGAAATGGCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGGATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAAGTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTGGACTTGCTTCTGa                                                                                                                     <  2:143313/251‑1 (MQ=255)                                                                                                                  ggCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGAGATCTGTATTTCATTCCGGCGCACGCTAACCATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTTACTTGCTTCTGAt                                                                                                                    >  1:314809/1‑251 (MQ=255)                                                                                                                     ggTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCCCTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCa                                                                                                                  >  2:434146/1‑250 (MQ=255)                                                                                                                                             ttACTTGGGATCGGCCGCACTACGCTTTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGAGCTGTAGTTCATTCCGGCGCACGCTAAGAATTTGCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATAAAAGAGGTTACCCTGCGTGTAATc                                                                                           <  2:157479/249‑1 (MQ=255)                                                                                                                                                  ttggATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCt                                                                                       <  2:168894/246‑1 (MQ=255)                                                                                                                                                  tGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATGGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTc                                                                                     <  2:220875/250‑1 (MQ=255)                                                                                                                                                      aTCGGCCGCAGTACGCTGTGGCGGAAAATGAAGCAACATGGAATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGAt                                                                                <  2:493926/251‑1 (MQ=255)                                                                                                                                                         ggCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGtt                                                                                                                                                                                   <  1:479654/149‑1 (MQ=255)                                                                                                                                                         ggCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGtt                                                                                                                                                                                   >  2:479654/1‑149 (MQ=255)                                                                                                                                                            cGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGAGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAAtg                                                                          >  1:77434/1‑251 (MQ=255)                                                                                                                                                                  aCGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTTCGTGTAATCCGCTTCGAGATAGAATGTGTGc                                                                     <  1:582455/250‑1 (MQ=255)                                                                                                                                                                      tgaggCGGAAATAGAAGCAACATGGCATTGATGCCGGTCAGGTTAATCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑CGTGATCTGTATTTCAGTCCGGCGCACGCTAACAATTTTCCGCATCGTTTAAGGGCTTGTCTATCCCGCACTTTAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGCTCCAAGAGGTTACCCTGCGTGTAATCCGCCTCGAGATAGCATGTGTGCtgttt                                                                >  2:484149/4‑251 (MQ=255)                                                                                                                                                                                aaTGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACtgt                                                      <  2:132235/251‑1 (MQ=255)                                                                                                                                                                                aaTGAAGAAATATGGAATTGAAGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATTCATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCATCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACtgt                                                      <  2:306832/251‑1 (MQ=255)                                                                                                                                                                                                  tGATGCAGGGCAGTTTAAGCGCCGGGTAGGAAAGACAGAAACGATTTTTGATACATCAG‑AGTTATCTGTATTGCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGcc                                     <  1:601670/250‑1 (MQ=255)                                                                                                                                                                                                       cAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTAtt                               >  1:508213/1‑251 (MQ=255)                                                                                                                                                                                                            cAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGc                          >  1:182368/1‑251 (MQ=255)                                                                                                                                                                                                                    gcgcCGGGTATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCt                  <  1:434146/251‑1 (MQ=255)                                                                                                                                                                                                                            tATGAAAGACAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACt          >  2:451989/1‑251 (MQ=255)                                                                                                                                                                                                                                    aCAGAAACGATTTTTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACTGTACTtct  <  1:476784/251‑1 (MQ=255)                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                               AACATCTGTTTACCGAGCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTCTGATACATCAG‑AGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACTGTACTTCT  >  NC_000913/1252762‑1253239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑