Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	17,350	G→T	intergenic (+340/‑139)	sokC → / → nhaA	small regulatory RNA antitoxin SokC/Na(+):H(+) antiporter NhaA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	17,350	0	G	T	100.0%	116.0 / NA	38	intergenic (+340/‑139)	sokC/nhaA	small regulatory RNA antitoxin SokC/Na(+):H(+) antiporter NhaA
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (21/17);  total (21/17)

CCTCGCATTTTTGTGGCGTAATTTTTTAATGATTTAATTATTTAACTTTAATTTATCTCTTCATCGCAATTATTGACGACAAGCTGGATTATTTTTGAAATATTGGCCTAACAAGCATCGCCGACTGACAACAAATTAATTATTACTTTTCCTAATTAATCCCTCAGGAATCCTCACCTTAAGCTATGATTATCTAGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAA‑CGCATCTCACCGCTGATGGCGCAAATTCTTCAATAGCTCGTAAAAAACGAATTATTCCTACACTATAATCTGATTTTAACGATGATTCGTGCGGGGTAAAATAGTAAAAACGATCTATTCACCTGAAAGAGAAATAAAAAGTGAAACATCTGCATCGATTCTTTAGCAGTGATGCCTCGGGAGGCATTATTCTTATCATTGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGG  >  NC_000913/17114‑17595                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                      ccTCGCATTTTTGTGGCGTAATTTTTTAATGATTTAATTATTTAACTTTAATTTATCTCTGTATCGCAATTATTGACGACAAGCTGGATTATTTTTGAAATATTGTCCTAACAAATAACGCCGACTGACAAGAAATTAATTATTACTTTTCCTAATTAATCCCGCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGGCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTg                                                                                                                                                                                                                                          <  1:269619/251‑1 (MQ=255)            tgtgGCGTAATTTTTTAATGATTTAATTATTTAACTTTAATTTATCTCTTTATCGCAATTATTGACGACAAGCTGGATTATTTTTGAAATATTGTCCTAACAAATAACGCCGACTGACAAGAAATTAATTATTACTCTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAAt                                                                                                                                                                                                                               >  2:613947/1‑251 (MQ=255)             gtgGCGTAATTTTTTAATGATTTAATTATTTAACTTTAATTTATCTCTTTATCGCAATTATTGACGACAAGCTGGATTATTTTTGAATTATTGTCCTAACAAATAACGCCGCCTGACAAGAAATTAATTATTACTTTTCCTAATTAATCCCTCAGAAATCCTAACCTTAAGCTATGATTTTCTGTGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCACTGATGGCGCAAAtt                                                                                                                                                                                                                              >  2:380938/1‑251 (MQ=255)                     aTTTTTTAATGATTTAATTATTTAACTTTAATTTATCTCTTTATCGCAATTATTGACGACAAGCTGGATTATTTTTGAAATATTGTCCTAACAAATAACGCCGACTGACAAGAAATTAATTATTACTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAAtg                                                                                                                                                                                                                      >  1:119527/1‑250 (MQ=255)                     aTTTTTTAATGATTTAATTATTTAACTTTAATTTATCTCTTTATCGCAATTATTGACGACAAGCTGGATTATTTTTGAAATATTGTCCTAACAAATAACGCCGACTGACAAGAAATTAATTATTACTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAAtg                                                                                                                                                                                                                      <  2:209526/251‑2 (MQ=255)                           tAATGATTTAATTATTTAACTTTAATTTATCTCTTTATCGAAATTATTGAAGACAATCTGGTTTATTTTTGAAATATTGTCCTAACAAATAACGCCGACTGACAATAAATTAATTATTACTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAATCTATGATTATCTGTGATTAGGGTCACTCGTGCACGCTTACAGCTGT‑CA‑AAAAACTCTTCTCACCGCTGATGTCGCCATTTCTTCAAtggatcgt                                                                                                                                                                                                                >  2:356044/1‑244 (MQ=255)                                  ttAATTATTTAACTTTAATTTATCTCTTTATCGCAATTATTGACGACAAGCTGGATTATTTTTTAAATATTGTCCTAACAAATAACGCCGACTGACAAGAAATTAATTATTACTTTTCCTAATTAATCCCTCATAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTAATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTaaaaaa                                                                                                                                                                                                          <  2:388717/250‑1 (MQ=255)                                                ttAATTTATCTCTTTATCGCAATTATTGACGACAAGCTGGATTATTTTTGAAATATTGTCCTAACAAATAACGCCGACTGACAAGAAATTAATTATTACTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCt                                                                                                                                                                                                                                           <  2:219522/203‑1 (MQ=255)                                                ttAATTTATCTCTTTATCGCAATTATTGACGACAAGCTGGATTATTTTTGAAATATTGTCCTAACAAATAACGCCGACTGACAAGAAATTAATTATTACTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCt                                                                                                                                                                                                                                           >  1:219522/1‑203 (MQ=255)                                                ttAATTTATCTCTTTATCGCAATTATTGACGACAAGCTGGATTATTTTTGAAATATTGTCCTAACAAATAACGCCGACTGACAAGAAATTAATTATTACTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTac                                                                                                                                                                                            <  2:254263/250‑1 (MQ=255)                                                              taTCGCAATTATTGACGACAAGATGGATTATTTTTGAAATATTGTCCTAACAAATAACGCCGACTGACAAGAAATTAATTATTACTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGAttt                                                                                                                                                                             >  1:491399/2‑251 (MQ=255)                                                               aTCGCAATTAATGACGACAAGCTGGATTATTTTTGAAATATTGTCCTAACAAATAACGCCGACTGACAAGAAATTAATTATTACTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGAttt                                                                                                                                                                             <  2:216223/250‑1 (MQ=255)                                                                    aaTTATTGACGACAAGCTGGATTATTTTTGAAATATTGTCCTAACAAATAACGCCGACTGACAAGAAATTAATTATTACTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACgt                                                                                                                                                                       >  2:347926/1‑250 (MQ=255)                                                                       tattGACGACAAGCTGGATTATTTTTGAAATATTGTCCTAACAAATAAAGCCGACTGACAAGAAATTAATTATTACTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACgatg                                                                                                                                                                     >  1:78231/1‑250 (MQ=255)                                                                        attGACGACAAGCTGGATTATTTTTGAAATATTGTCCTATCAAATAACGCCGACTGACAAGAAATTTATTATTACTTTTCCTAATGAATCACTCAGAAATCCTCACCTTAAGCTATGATTATCTGGACTTAGGTTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGACTCAAATTCTTCAATTTATCGTAAAAAACGAGTTATTCCTCCACTATAATCTGATTTTAACgatgat                                                                                                                                                                   <  2:342178/251‑1 (MQ=255)                                                                                 acgCTGGCTTATTTTTGAAATATAGACCTACCACTTAAAGCCGCCTGACAAGAAATTAATTATTACTTTTCCTAATTAATCCATCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGACACTCGTGAGCGCTTACAGCCGT‑CACAAAC‑CTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAACAAACGCGTTATTCCTACACTATAATCTGATTTTAACgatgctttgtgaggg                                                                                                                                                          >  2:570014/3‑240 (MQ=255)                                                                                            tttttGAAATATTGTCCTAACAAATAACGCCGACTGACAAGAAATTAATTATTACTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATTTGTGCGGGGTAAAATAGt                                                                                                                                                >  2:420499/1‑250 (MQ=255)                                                                                                 gAAATATTGTCCTAACAAATAACGCCGAATGACAAGAAATTAATTATTACTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATTTGTGCGGGGTAAAATAGTaaaat                                                                                                                                           <  2:205211/250‑2 (MQ=255)                                                                                                    atatTGTCCTAACAAATAACGCCGACTGACAAGCAATTAATTATTACTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATTTGTGCGGGGTAAAATAGTAAAAACGAt                                                                                                                                       >  1:497876/1‑251 (MQ=255)                                                                                                                   ataacGCCGACTGACAAGAAATTAATTATTACTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATTTGTGCGGGGTAAAATAGTAAAAACGATCTATTCACCTGaa                                                                                                                          >  1:39926/5‑249 (MQ=255)                                                                                                                   ataacGCCGACTGACAAGAAATTAATTATTACTTTTCCTAATTAATCACTCAGAAATCCTCACCTTAAGCTCTGTTTATCTCGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGCTTTGCGCGGGGTAAAATAGTAAAAACGATCTATTCACCTGaa                                                                                                                          >  1:414704/5‑249 (MQ=255)                                                                                                                           gACTGACAAGAAATTAATTATTACTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATTTGTGCGGGGTAAAATAGTAAAAACGATCTATTCACCTGAAAGAGAAATaa                                                                                                                <  1:380938/251‑1 (MQ=255)                                                                                                                                  aagaaaTTAATTATTTCTTTTCCTAATTAATCCCTCAGAAAGCCGCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGA‑CA‑AAAAACTCATCTCTCCGCTGATTGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACATTATAAGCTGATTTTAACGATGATTTGGGCGGTGTAAAATAGTAAAAACGATCTAGTCGCCTGAAAGAGAAAGAAAAAGTGa                                                                                                         <  2:564695/248‑1 (MQ=255)                                                                                                                                    gaaaTTAATTATTACTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATTTGTGCGGGGTAAAATAGTAAAAACGATCTATTCACCTGAAAGAGAAATAAAAAGTGaa                                                                                                        >  1:408485/2‑250 (MQ=255)                                                                                                                                          aattaTTACTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATTTGTGCGGGGTAAAATAGTAAAAACGATCTATTCACCTGAAAGAGAAATAAAAAGTGAAACATCt                                                                                                  <  1:624850/250‑1 (MQ=255)                                                                                                                                                taCTTTTCCTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATTTGTGCGGGGTAAAATAGTAAAAACGATCTATTCACCTGAAAGAGAAATAAAAAGTGAAACATCTGCATCg                                                                                            >  1:386136/1‑250 (MQ=255)                                                                                                                                                       ccTAATGAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCATAGTGTCAATCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATTTGGGCGGGGTAAAATAGTAAAAACGATCGATTCACCTGAAAGAGAAATAAAAAGTGAAACATCTGCATCGTTTCTTTa                                                                                    <  2:51532/251‑1 (MQ=255)                                                                                                                                                        cTAATTAATCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATTTGTGCGGGGTAAAATAGTAAAAACGATCTATTCACCTGAAAGAGAAATAAAAAGTGAAACATCTGCATCGATTCttt                                                                                     >  2:160993/1‑249 (MQ=255)                                                                                                                                                             taatCCCTCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATTTGTGCGGGGTAAAATAGTAAAAACGATCTATTCACCTGAAAGAGAAATAAAAAGTGAAACATCTGCATCGATTCTTTAGCAGTg                                                                              >  2:6187/1‑251 (MQ=255)                                                                                                                                                                    tCAGAAATCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATTTGTGCGGGGTAAAATAGTAAAAACGATCTATTCACCTGAAAGAGAAATAAAAAGTGAAACATCTGCATCGATTCTTTAGCAGTGATGCCTc                                                                       >  2:374203/1‑251 (MQ=255)                                                                                                                                                                     cagaaaTCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGTCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACTCTATAATCTGATTTTAACGATGATTTGTGCGGGGTAAAATATTAAAAACGATCTATTCCCCTGAAAGAGAAATAAAAAGTGAAACATCTGCATCGATTCTTTAGCAGTGATGCCTc                                                                       <  2:554746/246‑1 (MQ=255)                                                                                                                                                                     cagaaaTCCTCACCTTAAGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATTTGTGCGGGGTAAAATAGTAAAAACGATCTATTCACCTGAAAGAGAAATAAAAAGTGAAACATCTGCATCGATTCTTTAGCAGTGATGCCTCg                                                                      >  1:141432/5‑251 (MQ=255)                                                                                                                                                                                    gaaGCTATGATTATCTGGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATTTGTGCTGGGTAAAATAGTAAAAACGATCTATTCACCTGAAAGAGAAATAAAAAGTGAAACATCTGCATCGATTCTTTAGCAGTGATGCCTCGGGAGGCATTATTCtt                                                       <  1:595755/250‑1 (MQ=255)                                                                                                                                                                                                      gCTTAGGGTCACTCGTGAGCGCTTACAGCCGTTAA‑AAAA‑CTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATTTGTGCGGGGTAAAATAGTAAAAACGATCTATTCACCTGAAAGAGAAATAAAAAGTGAAACATCTGCATCGATTCTTTAGCAGTGATGCCTCGGGAGGCATTATTCTTATCATTGCCGCTATCCTg                                     <  1:41290/251‑1 (MQ=255)                                                                                                                                                                                                                aCTCGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATTTGTGCGGGGTAAAATAGTAAAAACGATCTATTCACCTGAAAGAGAAATAAAAAGTGAAACATCTGCATCGATTCTTTAGCAGTGATACCTCGGGAGGCATTATTCTTATCATTGCCGCTATCCTGGCGATGAtt                            >  1:443913/1‑250 (MQ=255)                                                                                                                                                                                                                   cGTGAGCGCTTACAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATTTGTGCGGGGTAAAATAGTAAAAACGATCTATTCACCTGAAAGAGAAATAAAAAGTGAAACATCTGCATCGATTCTTTAGCAGTGATGCCTCGGGAGGCATTATTCTTATCATTGCCGCTATCCTGGCGATGATTAt                          <  1:428952/249‑1 (MQ=255)                                                                                                                                                                                                                              aCAGCCGT‑CA‑AAAAACTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGAGTTATTCCTACACTATAATCTGATTTTAACGATGATGTGTGCGGGGTAAAATAGTAAAAACGATCTATTCACCTGAAAGAGAAATAAAAAGTGAAACATCTGCATCGATTCTTTAGCAGTGATGCCTCGTGAGGCATTATTCTTATCATTGCCGCTATCCTGGCGATGATTATGGCCAATAgcggc             <  2:291636/251‑1 (MQ=255)                                                                                                                                                                                                                                          aaaa‑CTCATCTCACCGCTGATGGCGCAAATTCTTCAATGGATCGTAAAAAACGCGTTATTCCTACACTATAATCTGATTTTAACGATGCTTTGTGCGGGGTAAAATAGTAAAAACGATCTATTCACCTGAAAGAGACATAAAAAGTGAAACATCTGCATCGATTCTTTAGCAGTGATGCCTCGGGAGGCATTATTCTTATCATTGCCGCTATCCTGGCGATGATTATGGCCAATAGCGGCGCAACCAGTgg  >  2:612077/1‑251 (MQ=255)                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                      CCTCGCATTTTTGTGGCGTAATTTTTTAATGATTTAATTATTTAACTTTAATTTATCTCTTCATCGCAATTATTGACGACAAGCTGGATTATTTTTGAAATATTGGCCTAACAAGCATCGCCGACTGACAACAAATTAATTATTACTTTTCCTAATTAATCCCTCAGGAATCCTCACCTTAAGCTATGATTATCTAGGCTTAGGGTCACTCGTGAGCGCTTACAGCCGT‑CA‑AAAA‑CGCATCTCACCGCTGATGGCGCAAATTCTTCAATAGCTCGTAAAAAACGAATTATTCCTACACTATAATCTGATTTTAACGATGATTCGTGCGGGGTAAAATAGTAAAAACGATCTATTCACCTGAAAGAGAAATAAAAAGTGAAACATCTGCATCGATTCTTTAGCAGTGATGCCTCGGGAGGCATTATTCTTATCATTGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGG  >  NC_000913/17114‑17595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑