| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 7,711 | A→T | A83A (GCT→GCA) | yaaJ ← | putative transporter YaaJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 7,711 | 0 | A | T | 96.3% | 153.9 / NA | 54 | A83A (GCT→GCA) | yaaJ | putative transporter YaaJ |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (30/22); minor base G (0/2); total (30/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCTTGAACTCCGCTGAAAATTATGCCATAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGACGTCACGTTCTTTATAAAGTTGTGCCAGAGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAAAAGACGGCTCCAGGTCCACCGGCGGTAATAGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAA‑CTGCACAAATCCGGTGCG‑AAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGACGCTGTTAATGAAGGAGAAAAAAT > NC_000913/7471‑7952 | cgcctGAATTCCGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAAATGCCAGCGCac > 2:279800/5‑250 (MQ=255) cGCTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGGCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGAAATTGACAGCGCAACGCCGGCCAgg > 1:463767/1‑251 (MQ=255) cTGAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACACCGGCCAGGtt > 1:87187/1‑251 (MQ=255) gAAAATTATGCCGTAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGtt < 1:531352/249‑1 (MQ=255) ccgtAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCCGGTTCCCGcgccccac > 2:350145/4‑244 (MQ=255) ggCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCACGCGCGCCATATACCATGCCGGTCCGCCGCGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGCGGGAACATTCGGCAAACGAGGTCGCCATGCCGCTAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGGAATTGCCAGCGGAACGCCGGCCCGGTTGACGGTACCCAcgcgac > 1:362641/1‑249 (MQ=255) gCGATGAGCAAAACGACGGCGAACAGAACGCCAATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCCGGGTGCCGCCACCCACccgcgc > 1:499886/1‑251 (MQ=255) tGAGCAAAACGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGACGGCCAGGGTTCCGCCACCCACGGGcgacgc > 1:418753/1‑250 (MQ=255) gACGGCGAACATACCGCCCATCCAGCGCATCCCCAGCCCGCGCGCAATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTac < 1:249570/251‑1 (MQ=255) aCGGCGAACAGCACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACACCGGCCAGGGTGCCGCTACCCCCGCGcgccgccacacagggacc > 2:450849/1‑239 (MQ=255) cGGCGAACAGACCGCCCACCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTaca‑c < 1:440603/251‑1 (MQ=255) gCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑Caa < 1:607514/251‑1 (MQ=255) ccAGCGCATCCCCAGCCCGCGCGCCATATCCCTGGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTa < 2:159119/251‑1 (MQ=255) cAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGGTGCCGCTACCCCCGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGACATGAgggta > 1:79965/1‑247 (MQ=255) cgcATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAAcc < 1:623283/251‑1 (MQ=255) gcATCCCCAGCCCGCGCGCCATATCCCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCg < 1:383276/251‑1 (MQ=255) gcATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCCGGTTGCCGCTACCCCCGCGCGCCTCA‑AGACTGGGACA‑CACAGACTGAAATGAGGTTAAAccc > 1:114212/1‑250 (MQ=255) ccccAGCCCCCGCGCCATAGCCCATGCCGGTCCGCCACGAAACTGCCCATTTGCACCCCTTTCTTTATAAAGCTGGGCGAGGGAACATTCGGCAAACGAGGTCGCCAGGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTg < 2:463767/251‑1 (MQ=255) cccccaaaacccATGCCGGCCCGCCCCGAAACGGCCCATTGGCATCACTTTCTTGATAAAGCTGTGCGAGGGAACATTCGGAAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGa < 2:548305/241‑1 (MQ=255) tataCCATGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGGAATTGCCCGCGCCACGACGGCCCGGTTGCCGCTCCCCACGCCCGCCCCC‑CGCGTGGGACA‑CAATGACTTGAATGAGGGTAAAcccgccgggtgggggggcatgatt > 2:288852/1‑229 (MQ=255) aaCCAGGCCGGTCCGCCACGAAACTGCCCATTGGCATCCCGTTCTTTATAAAGCTGTGCGAGGGAACATCCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACGGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCGGTG‑GAGGAATGCTAtt < 2:116635/250‑1 (MQ=255) ccctggCCGGTCCGCCACGAAACGGCCCATTGGCATCACGTTCTTTATAAAGCTTTGCGAGGGAACATGCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGAATGCTAttt < 1:538903/246‑1 (MQ=255) ccATGGCGGTCCGACACGAAAATGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCACACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCCGCGCAAAGCCGGCCAGGTTGCCCCCACCCACGCGCGCCGCA‑AGACTGGGACA‑CAAAGACTGAAATGTGGGTTAACCGCCCGGATGTG‑GGTGAATGCTAtttt > 2:619826/1‑251 (MQ=255) aTGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GGTGAATGCTAttttt > 1:43479/1‑250 (MQ=255) aTGCCGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGAATTATAtttttt > 1:94733/1‑250 (MQ=255) ccGGTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCCACGCAACGCCGGCCAGGGTGCCGCCACCCACGCGCGCCGCA‑AGACTGGTACA‑CAACGAATGAACTGAGGGTAAACCGCCTGGCT‑TGTGATGAATGCTATTTTTAAgc > 2:520448/1‑250 (MQ=255) gTCCGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTGATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACAACAA‑GAATTAAATGACGGTAAACCGCCTGGCTGGG‑GATGGATGCTATTTTTAAGACtt > 1:125506/1‑251 (MQ=255) acGCCACGAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAAAATTCGGCAAACGAGGACGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAAATGCCCGCGCCACGGCGGCAAGGATGCCCCTACCCACCCGCGCCGCACGGCCTGG‑ACA‑CCATGAATGCAATGAGGTTAAACCGCCTGTCTGTG‑GGTGAATACTATTTTTAAGACtttt > 2:390620/2‑251 (MQ=255) gAAACTGCCCATTGGCATCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCCCGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGGTAAACCGCCTGGCTGTG‑GATGAATTCTATTTTTAAGACTTTTGCCAAAc > 1:191775/1‑251 (MQ=255) ggcatCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCCGCGCAACGCCGGCCAGGGTGCCGCTAACCCCGCGCCCCGCA‑AGACTGGTACA‑CAAAGACTGAAATGAGGGTAAACCGCCTGGCGGTG‑GGTGAAAGCTATTTTTAAGAATTTTGACAAACTGGCggggtgt > 2:331492/5‑244 (MQ=255) catCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGGACA‑CAATGACTGAAATGAGGGTAAACCGCCTGGCTGTG‑GATGAATGCTATTTTTAAGAATTTTGCCAAACTGGCGGATGTAGCg > 1:217588/3‑250 (MQ=255) atCACGTTCTTTATAAAGCTGTGCGAGGGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCC‑AGCCTGGGACA‑CCAAGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGAAGGCTATTTTTATGACTTTTTCCAAACAGGCGGGTGTAgagg > 2:445052/2‑247 (MQ=255) aaaagctttgctagggaACATTCGGCAAGCGAGGTCTCCATGCCGATAAACGCGGCAACCCACATCCAGAAGCCGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAAGGAGGTTAAACCGCCTGGCTGTG‑GATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAA‑CTGCACAAATcc < 1:68935/236‑1 (MQ=255) gagggaACATCCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCTACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAA‑CTGCACAAATCCGGTGCG‑AAAAg < 2:173366/247‑1 (MQ=255) aaCATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCCGCCCCACGCCGGCCCGGTTGCCGCTACCCACGCGCGCCGCA‑CGACTGGTACA‑CCATGCCTGAAATGAGGTTAAACCGCCTGGCTGTG‑GGTGAATGCTATTTTTTAGACTTTTGCCCAACTGGCGGGTGGAGCGAAA‑ACGCACAAATTCGGTGCG‑AAAAGTGAAc > 2:110028/1‑251 (MQ=255) ttCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCCCGCGCGCCGCC‑AGACTGGGACA‑CAATGGCCGAAATGAGGTTAAACCGCCCGGCTGTG‑GGTGAATGCTATTTTTTAGACTTTTGCCAAACCTGCGGATGGAGCGAAAACT‑CACAAATCCGGGGCG‑GAAAGTGGACcaa > 2:484345/1‑250 (MQ=255) ttCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGACAGCCCAACGCCGGCCAGGGAGCCGCTACCCCAGCGCGCCGCC‑AGGATGGGACA‑CAATGAATGAAATGAGGATAACCCGCCCGGCTGTG‑GGTGAATGCTCTTTTTTAGACTTTTGCCAAACTGGCGGAAGTAACGAAA‑CTGCCCAAATCCGGTGCG‑AAAAGAGAACcaac > 1:365742/1‑251 (MQ=255) tCGGAAAACGAGGCCGCCAGGCCGATAAACGCGGCAACCCACACCCAGAAGACGGCTCCAGGTCCACCGGCGGTAAGTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTT‑GATGAATGCTATTTGTAAGACTTGTGCCAAACTGGCGGATGTAGCGAAA‑CTGCACAAATCCGGTGCG‑AAAAGTGAACcaac < 2:592607/250‑1 (MQ=255) aCGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCCCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAA‑CTGCACAAATCCGGTGCG‑AAAAGTGAACCAACAACCTgcg < 2:483979/251‑1 (MQ=255) cGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAA‑CTGCACAAATCCGGTGCG‑AAAAGTGAACCAACAACCTgcgc < 1:182650/251‑1 (MQ=255) gCCATGCCGATAAACGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCCGGGTGCCGCTACCCACGCGCGCCCCC‑AGACTGGTACA‑CAAAGACTGAAATGAGGGTAAACCGCCTGGCTGTG‑GGTGAATGCTATTTTTAAGACTTTTTCCCAACTTGCGGGTGTAACGGAA‑CTTCCCAAAACCGGTGCG‑aaaaagtaacccacaacccggcccgcaca > 2:341578/1‑225 (MQ=255) aaaCGCGGCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAA‑CTGCACAAATCCGGTGCG‑AAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATc < 1:68324/250‑1 (MQ=255) ggCAACCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGGTGGCGCTACCCCCGCGCGCCGCA‑AGAACGGCACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGGTGTGGCGAAA‑ATGCAAAAATTCGGGGCG‑GAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATTATTACCg > 1:552189/1‑251 (MQ=255) aaCCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCCGCGCAACGCCCGCCCGGGTGCCGCTACCCACGCGCGCCGCA‑AGACTGGGACA‑CAATGACTGAAATGAGGTTAAACCGCCCGGCTGTG‑GGTGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAA‑ATGCACAAATCCGGTGCG‑AAAAGTGAACCCACAAACTGCGCCGCAGAGCAGGGAAATTATTAACGATc > 2:346000/1‑251 (MQ=255) aaCCCACATCCAGAAGACGGCTCCAGGTCCACCGGCGGTAAATGCCAGCCCAACGCCGGCCCGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GGTGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGGTGTAGCGAAA‑CTGCACAAATCCGGTGCGCAAAAG‑GAACCAAACACCTGCGCCGGAAAGCAGGGAAATCATTACCGATc > 2:35645/1‑251 (MQ=255) cacaTCCAGAAGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAA‑CTGCACAAATCCGGTGCG‑AAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCa < 1:86900/251‑1 (MQ=255) aTCCAGAAGACGGCTCCAGGTCCACCGGCGGTAAATGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGAATGCTATTTTTAAGGCTTTTGCCAAACTGGCGGATGTAGCGAAA‑ATGCACAAATCCGGGGCG‑AAAAGGGAACCAACAACCTGCGCCGAAGAGCAGGGAAAACATTAACGATCCCCaa > 1:177502/1‑249 (MQ=255) cccagaaGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAA‑CTGCACAAATCCGGTGCG‑AAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAgg < 1:548345/246‑1 (MQ=255) ccagaaGACGGCCCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAA‑CTGCACAAATCCGGTGCG‑AAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGa < 2:273379/247‑1 (MQ=255) aGACGGCTCCAGGTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTGGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAGCCGCCTGGCTGTG‑GATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAA‑CTGCACAAATCCGGTGCG‑AAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGACGCTg < 1:288852/251‑1 (MQ=255) cGGCTCCAGGGCCACCGGCGGTAATGGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAA‑CTGCACAAATCCGGTGCG‑AAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGACGCTGTTa < 2:114212/251‑1 (MQ=255) cccAGGTCCACCGGCGGTAATGGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAA‑CTGCACAAATCCGGTGCG‑AAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGACGCTGTTAAtaa < 2:499886/250‑3 (MQ=255) gTCCACCGGCGGTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAA‑CTGCACAAATCCGGTGCG‑AAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGACGCTGTTAATAAAGgag < 1:450849/251‑1 (MQ=255) ggcggTAATTGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGCAATGAGGTTAAACCGCCTGGCTGTG‑GATGCATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGCAA‑CTGCACAAATCCGGTGCG‑AAAAGTGAACCAACAACCTGCGCCGACGAGCAGGTAAATCATTACCGCTCCCCAAAGGACGCTGTTAATAAAGGAGACAAAAt > 1:564457/1‑251 (MQ=255) | CGCTTGAACTCCGCTGAAAATTATGCCATAGGCGATGAGCAAAAAGACGGCGAACAGAACGCCCATCCAGCGCATCCCCAGCCCGCGCGCCATATACCATGCCGGTCCGCCACGAAACTGCCCATTGACGTCACGTTCTTTATAAAGTTGTGCCAGAGAACATTCGGCAAACGAGGTCGCCATGCCGATAAACGCGGCAACCCACATCCAAAAGACGGCTCCAGGTCCACCGGCGGTAATAGCCAGCGCAACGCCGGCCAGGTTGCCGCTACCCACGCGCGCCGCA‑AGACTGGTACA‑CAATGACTGAAATGAGGTTAAACCGCCTGGCTGTG‑GATGAATGCTATTTTTAAGACTTTTGCCAAACTGGCGGATGTAGCGAAA‑CTGCACAAATCCGGTGCG‑AAAAGTGAACCAACAACCTGCGCCGAAGAGCAGGTAAATCATTACCGATCCCCAAAGGACGCTGTTAATGAAGGAGAAAAAAT > NC_000913/7471‑7952 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |