| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,605,391 | 0 | C | T | 69.0% | 56.6 / 35.0 | 60 | A194V (GCG→GTG) | hyfD | hydrogenase 4 component D |
| Reads supporting (aligned to +/- strand): ref base C (6/12); new base T (24/16); total (32/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.88e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.56e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TTTTTACTGGTGTTTATCGGCGCGATGGCGGGACTGGTACTCTCCTCGACGCTGCTCGGTCAGTTGTTGTTTTTTGAAATTACAGGCGGCTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGTGGGCGTTTACATTTTTGCCCGCGCTATTATCGACGGCGGCAATATCCCGCATGTGATTGGCGGCGTTGGC > NC_000913/2605162‑2605635 | tttttACGGGTGTTTATCGGCGTGATGGCGGGACTGGTACTCTCCGCGACGCTGCTCGGTCAGTTGTTGTTTTTTGAAATTACAGGCGGCTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑t < 2:17655/250‑1 (MQ=255) ggTGTTTATCGGCGCGATGGCGGGACTGGTACTCTCCTCGACGCTGCTCGGTCAGTTGTTGTTTTTTGAAATTACAGGCGGCTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATG‑AGCGAG‑TTACACGGCg < 2:198993/251‑1 (MQ=255) gtgtTTATCGGCGCGATGGCGGGACTGGTACTCTCCTCGACGCTGCTCGGTCAGTTGTTGTTTTTTGACATTACAGGCGGCTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGATACTTATCACTCATATCGGCTCGCTGGGGTTGTATTTTTCCGCCGCCACGCTGTTTTTGCAGACCGGGACGGTTTTGGTTAGAGCGATT‑AGCGAG‑GTACCCGGCgg > 1:612771/1‑250 (MQ=255) ggttATCGGCGCGATGGCGGGACTGGTACTCTCCTCGACGCTGCTCGGTCAGTTGTTGTTTTTTGAAATTACAGGCGGCTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGAc < 2:141881/248‑1 (MQ=255) aCTGGTACTCTCCTCGACGCTGCTCGGTCAGTTGTTGTTTTTTGAAATTACAGGCGGCTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTTGCGCGATG‑AGCGGG‑TTAAACGGCGACGCCCGTTATCTGGTTTTTggcg > 1:450915/1‑251 (MQ=255) aCTCTCCTCGACGCTGCTCGGTCCGTTGTTGTTTTTTGAAATTACAGGCGGCTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCTCTAAAAGCGTTACTTATCACTCATATCGGCTCGGTGCGGTTGTATTTTTGCGCCGCCACGCTGGTTTTGACGACCGGGACGTTTGAGCTTTGCGCGGTGGAG‑GAGGTTA‑ACGGCGGCGCACGTTATCTGGTTTTTTGCGGTATcc > 2:220325/1‑251 (MQ=255) aCTCGCCTCGACGCTGCTCGGTCAGTTGTTGTTTTTTGAAATTACAGGCGGCTGCTCCTGGGCGTTGAGCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTGATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAACGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATcc < 1:91645/251‑1 (MQ=255) ctctCCTCGACGCTGCTCGGTCAGTTGTTGTTTTTTGAAATTACAGGCGGCTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCCCCCCGCTCTTTTTGCAGACCGGGACGTTTGTGCTTTGCGCGATG‑TGCGTG‑TTTCCCGGCGACGCCCGTTATCTgggtttttgggggcttcc > 2:8959/1‑235 (MQ=255) cGACGCTGCTCGGTCAGTTGTTGTTTGTTGAAATTACAGGCGGCTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGcc < 2:230115/251‑1 (MQ=255) gACGCTGCTCGGTCAGTTGTTGTTTTTTGAAATTACAGGCGGCTGCTCCTGGGCGTTGTTCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTTCCGCCCCCACGCTGTTTTTTCCGGCCGGGACGTTTTTTCTTTACCCGCTG‑AGCGGG‑TTACACGGCGACGCACGGTATCTTGTTTTTggcgggctcctttttttcc > 2:179034/1‑237 (MQ=255) gACGCTGCTCGGTCAGTTGTTGTTTTTTGAAATTACAGGCGGCTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCcg > 1:451826/1‑251 (MQ=255) cAGTTGTTGTTTTTTGAAATTACAGGCGGCTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGGACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAAt < 1:231975/250‑1 (MQ=255) gttTTTTGAAATTACAGGCGGCTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGc < 1:15120/251‑1 (MQ=255) aaaTTACAGGCGGCTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATg < 1:26162/251‑1 (MQ=255) aCAGGCGGCTGCTCCTGGGCGTTGAACAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCAGCCTGTTTGCCGCGTGGGGGAAATCTGCCCATCTACCG‑ATGCAAg < 1:487969/250‑1 (MQ=255) ggcggcTGCTCCTGGGCGGTGATCAGTTATTACCAGAGCGATAAAGCGGAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCGCGTTGGGGTTGTATCTTGCCGCCGCCGCGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCGGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTg < 2:303859/251‑1 (MQ=255) ggcTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCt < 1:33766/251‑1 (MQ=255) ggcTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCAGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGAGATG‑AGCGAG‑TTACACGGCTAAGCACGTTATCTGGGTTATGGCGGCATCCTGTTTGGCGCGGGGGGGAAATCGGCCCAGCTAACC‑ATGCAAGCGTGGcc > 1:617893/1‑250 (MQ=255) gctgctCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTa < 1:8959/251‑1 (MQ=255) ctCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCCCGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCAAGGTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGGAATCGGCCCCGCTACCG‑ATGCACACGTGGCTACCgg > 1:223457/1‑251 (MQ=255) tCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCCGCTACCG‑GTGCAAGCGTGGCTACCggg > 1:2227/1‑250 (MQ=255) gggCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACg < 2:216374/249‑1 (MQ=255) ttGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATG‑AGCGGG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGGAATCGGCCCCGCTTACG‑GTGCCAGCGTGGCTAACGGGCGCAATggg > 2:270449/1‑250 (MQ=255) cAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAGCATTTGTGCTTAGAGCGATG‑AGCGAG‑TTAAACGGCGACGCACGTTATATGGATTTTGGCGGCCTCCTGTTTGCCGCGTGGGGGAAATCGGGCCAGATTCCG‑ATGCACGCGCGGCTTACGGGCGCAATGGGAgcgc > 1:567329/1‑251 (MQ=255) aGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACCCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCCCGTTTTCTGGTTTATGGCGGCAACCTTTTTGCCGCGTGGGGGAAATCTGCCCCGCTAACG‑TTGCAAACGGGGCGACCGGGGGCAATGGGAGCGcc > 2:217471/1‑251 (MQ=255) ttattaCCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCCAGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGGTG‑AGCGGG‑TTACACGGCGACGCACGTTATCTGGGTTATGGCGGCATCCCGTTTGCCGGGAGGGGGGAAACTGCCCCGCTACCG‑GAGCAAGCGGGGCTACCCGACGCCATGGGAGCGccc > 1:439013/1‑249 (MQ=255) ttattaCCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGGGGGGGAAATCGGCCCAGCTCCCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCa > 1:396612/1‑250 (MQ=255) gCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGG‑AAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAgcg < 1:398887/251‑1 (MQ=255) gCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGGTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTTGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAgc < 1:220325/251‑1 (MQ=255) gATAAAGCGCAGCGTTCAGCTCTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTTTTTTTGCAGAACGGGACGTTTTTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATATGGTTTATGGCGGAATCCTGTTTGCCGCGTGGGGGGAATCGGCCCAGCTACCG‑ATGCCAGCGTGGCCACCGGGCGCCATGGGAGCGCCAACACCCATCAgcgc > 2:182430/1‑251 (MQ=255) aTAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTAAACGGCGACGCACGTTATCTGGGTTATGGCGGCATCCTGTTTGCCGCGTGGGGGGAATCGGCCCAGATACCGCAT‑CAAAGGTGGCCAACGGACGCAATGGAGGCGcccaccccccacaccgcc > 2:537600/1‑235 (MQ=255) aaaGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTCCCGGACGCAATGGAAGCGCCAAAACCGATCAGCGCCtc > 1:224337/1‑250 (MQ=255) cgcAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTTCCCCCGCCAAGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGGGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGGGGGGGAAATCGGCCCAGCTTACG‑ATGCAAGCGCGGCCACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTAtctc > 1:45273/1‑251 (MQ=255) tCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGATGTATCTTGCCGCCGCCACGCTGTTTTTGCCGACCGGAAAGTTTGCGCTTAGCGCGCTG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGGAATCGGCCAAGCTACCG‑ATGCAAGCGGGGCTACCGGACGCAATGGAAGAGCCAACACCGATCAGCGCCTATCTCCAagccgc > 1:601829/1‑251 (MQ=255) cAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGATGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑TGGGAG‑TTACACGGCGACGCACGTTTTCTGGGTTTTGGCGGCCTCCTGTTTGCCGCGTGGGGGGAATCGGCCCCGCTAACG‑ATGCAAGCGGGGCTACCGGGCGCAATGGAAGCGCCCACAACCATCAACCCCTCTCTCCAccccgcc > 1:546069/1‑250 (MQ=255) gCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATc < 2:8025/251‑1 (MQ=255) gCACTAAAAGCGTTACTTATCACTCATATCGGCGCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAAGCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCATCACCGATCAGCGCCTATCTCCACGCCGCATc < 2:546320/251‑1 (MQ=255) aCTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATc < 1:96058/168‑1 (MQ=255) cTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCg < 1:499119/115‑1 (MQ=255) cTAAAAGCGTTACTTATCACTCATATCGGCTCGGTGGGGTTGTATCTTGCCGCCGCCCAGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCg > 2:499119/1‑115 (MQ=255) tgacttagctcTCATATCGGCTCGTTGGTGTTGTATCTTGCCGCCGCCTCGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCTAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCAGCCTGTTTGCCGCGTGGGGGAAAGCGGCCCAGCTTCCG‑ATGCAAGCGTGGCTGCCGGACGCAATTGAAGCGTCAACACCGATCAGCGCCTACCTCCACGCCGCTTCGAGGGTGaaa < 2:328970/239‑1 (MQ=255) tCACTCATATCGGCTCGTTGGGGTTGTATCTTTCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTTGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGGAGCGCCCACACCGATCAGCGCCTATCTCCCCCCCCCCTCGGTGGTGGAAGTGGGCggt > 2:140275/1‑249 (MQ=255) gcACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGTGGGCGtt < 2:334140/250‑1 (MQ=255) tCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCCCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGGTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGGCCAGCTACCG‑ATGCCAGCGTGGCTACCGGACGCAAAGGAAACGCCAACACCGATCAGCGCCTATCTCCATGCCGCAGCGATGGGGAAAGTGGGGGTTTAc > 1:13084/1‑250 (MQ=255) tatCGGCTCGTTGGGGTTGTATATTGCCGCCGCCACGCTGTTTTTGCCGACCGGAACGTTTGTGCTTCGCGCGATG‑AGCGAG‑TTACACGGCGCCGCACGTTCTCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGGGAACGGGCCAGCTAACG‑ATGCAAAGGTGGGCACCAGGCCCCATGGAAGCGCCAACACCGAACAGCGCCCTTCTCCACGCCGCAACGAGGGTGAAAGTGGGGGTTTACCttt > 2:225881/1‑251 (MQ=255) cGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGTGGGCGTTTACAttttt < 1:439913/250‑1 (MQ=255) gCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGTGGGCGTTTACATTTTTGcc > 2:215767/1‑251 (MQ=255) tGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGGGGGCGTTTACATTTTTGCCCGCGCt > 2:431870/1‑251 (MQ=255) ggTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGTGGGCGTTTACATTTTTGCCCGCGCtatt < 1:270449/251‑1 (MQ=255) tCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGTGGGCGTTTACATTTTTGCCCGCGCTATTATCAAcg > 1:227177/1‑251 (MQ=255) cTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGTGGGCGTTTACATTTTTGCCCGCGCTATTATCGAcgg > 1:285809/1‑251 (MQ=255) cgccgccACGCTGTTTTTGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGTGGGCGTTTACATTTTTGCCCGCGCTATTATCGACggcggc > 2:24003/1‑250 (MQ=255) cACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGTGGGCGTTTACATTTTTGCCCGCGCTATTATCGACGGCGGCAATATcc < 2:396612/251‑1 (MQ=255) gggttttGCAGACCGGAACGGTTGTGCTTAGGGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAAGCGGCCCAGCTACCG‑AGGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGTGGGCGTTTACAGTTTTGCCCGCGCTATTAGCGACGGCGGCAATATCCCGCAt < 2:55314/248‑1 (MQ=255) tttGCAGGCCGGTACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCCGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCGCCACGCCGCATCGATGGTGAAAGTGGGCGTTTACATTTTTGCCCGCGCTATTATCGACGGCGGCAATATCCCGCAtgtg < 2:467122/250‑1 (MQ=255) ttGCAGACCGGAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGTGGGCGTTTACATTTTTGCCCGCGCTATTATCGACGGCGGCAATATCCCGCATGTGAt > 1:259504/1‑251 (MQ=255) gCAGACCGGAACGTTTGCGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGTGGGCGTTTACATTTTTGCCCGCGCTATTATCGACGGCGGCAATATCCCGCATGTGATTg < 1:140275/251‑1 (MQ=255) ggAACGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGTGGGCGTTTACATTTTTGCCCGCGCTATTATCGACGGCGGAAATATCCCGCATGTGATTGGCGGCGt > 2:512978/1‑251 (MQ=255) gAACGTTTGAGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGACGCGTGGGGGAAATCGGCCAAGCTACCG‑ATGCAAGCGGGGATACCGGGCGACATGGAAACGCCAACACCGATAAGCGCCTATCTCAACGCCCCCTCGTAGGAGCAAGTGGGCGTTTAAATTTTTTCCAGCGTTATTCACGACAGCGGTAACATCCCGCATGTGATTgactgatgt > 2:354979/1‑243 (MQ=255) cGTTTGTGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGTGGGCGTTTACATTTTTGCCCGCGCTATTATCGACGGCGGCAATATCCCGCATGTGATTGGCGGCGTTGGc < 1:189982/251‑1 (MQ=255) | TTTTTACTGGTGTTTATCGGCGCGATGGCGGGACTGGTACTCTCCTCGACGCTGCTCGGTCAGTTGTTGTTTTTTGAAATTACAGGCGGCTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATG‑AGCGAG‑TTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCG‑ATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGTGGGCGTTTACATTTTTGCCCGCGCTATTATCGACGGCGGCAATATCCCGCATGTGATTGGCGGCGTTGGC > NC_000913/2605162‑2605635 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |