Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
JC | NC_000913 | 20,703 | +GCAAGAACCTGCAA | intergenic (‑195/+112) | insA1 ← / ← rpsT | IS1 family protein InsA/30S ribosomal subunit protein S20 |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 20703 | 0 (0.000) | 26 (0.440) +GCAAGAACCTGCAA |
22/462 | 1.1 | 100% | intergenic (‑195/+112) | insA1/rpsT | IS1 family protein InsA/30S ribosomal subunit protein S20 |
? | NC_000913 | 20704 = | 0 (0.000) | intergenic (‑196/+111) | insA1/rpsT | IS1 family protein InsA/30S ribosomal subunit protein S20 |
CATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATGCTTTCTGTGCAGCAGCT > NC_000913/20531‑20947 | tagagtggtcttaagtttaatacctcaatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTgcgc > 1:505400‑M2/174‑251 (MQ=255) cttaagtttaatacctcaatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCttttt > 2:1153‑M2/165‑251 (MQ=255) aagtttaatacctcaatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCGCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTca < 2:602418‑M2/89‑1 (MQ=255) taatacctcaatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAg < 2:23199‑M2/94‑1 (MQ=255) acctcaatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCa < 2:40453‑M2/99‑1 (MQ=255) cctcaatgtgtatcacaatatccacattctttgtagggggtctgtagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGGGTTCTCTCACGCATCACAAAAGCAGCAGGCAGAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAg < 2:395091‑M2/100‑1 (MQ=255) caatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgtgcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTGCACAAAGCTTCAGCaa < 1:536548‑M2/103‑1 (MQ=255) atgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAAt > 1:125340‑M2/147‑251 (MQ=255) tgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAAtt > 1:67‑M2/146‑251 (MQ=255) acattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGttt > 2:486786‑M2/129‑251 (MQ=255) attctttgtagggggtctggagattgagtcgatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTttgt > 1:191769‑M2/127‑251 (MQ=255) attctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTttgt < 1:464459‑M2/125‑1 (MQ=255) gggagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAATCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCt < 2:572054‑M2/131‑1 (MQ=255) agggggtatggagattgagtagatattcttgttcagcatgtatcagccgctggttctacgattcttaagacacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCCAATTGGCGATTAAGCCAGTTTGTTGATCtgtg > 2:379828‑M2/118‑251 (MQ=255) agatattcttgttcatattgtatcagcctatggttttacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGa < 1:173949‑M2/154‑1 (MQ=255) aatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGtttt > 2:298067‑M2/82‑251 (MQ=255) atgtatcagacgatggttctacgattcttaagccacgacgagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCCGTGTGTTCTCTCACGCATCACAAACGAAGCAGGCATAAAAAAAACCGCTTGCGCGGGCTTTTTCACAAAGATTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGGTAGCCTTATGACGTGCAGCTTTGttttt > 2:337244‑M2/81‑251 (MQ=255) gtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTtgt > 1:79437‑M2/79‑251 (MQ=255) agccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATc < 2:505400‑M2/178‑1 (MQ=255) tcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTg > 1:214221‑M2/56‑250 (MQ=255) cacgaagagttcagatagtacaacggcatgtctgcaagcacctgcaaCTTTTGACTATCTGGCCACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTgcg > 2:65049‑M2/48‑124 (MQ=255) cacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTgcg < 1:65049‑M2/77‑1 (MQ=255) gttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCGTACGGTCCACGATCGGtt < 1:501633‑M2/212‑1 (MQ=255) caacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGAAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCCCGATCGGTTGCATTTCGTTa > 2:503928‑M2/28‑250 (MQ=255) atgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGCGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATGCttt > 1:366458‑M2/21‑251 (MQ=255) gtcctcaagaacctgcaaCAGTTGACTATCTTGCAACCGGCAGTGTGGTCCCTCACGCATCACAAAAGCAGCAGTCATAAAAAAACCCTCTGGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTTATCTGTGCAGTCAGATTAGGCTTAGGACGTGCAGCTTTGGTTTTGTGGATCAGAGCTTTAGCAGCCTGACGGTCCACGTTCGGTTGCATTTCGTTAAATGCTTTc < 2:91081‑M2/232‑1 (MQ=255) tgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATAACAAAAGCAGCAGGCATAAAAAACACCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGATAGACTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATGCTTTCtgtg > 2:102395‑M2/16‑251 (MQ=255) cctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATGCTTTCTGTGCAGCAGCt < 1:298067‑M2/244‑1 (MQ=255) cctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATGCTTTCTGTGCAGCAGCt > 1:119644‑M2/8‑251 (MQ=255) | CATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATGCTTTCTGTGCAGCAGCT > NC_000913/20531‑20947 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |