Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 20,703 +GCAAGAACCTGCAA intergenic (‑195/+112) insA1 ← / ← rpsT IS1 family protein InsA/30S ribosomal subunit protein S20

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 207030 (0.000)26 (0.440)
+GCAAGAACCTGCAA
22/462 1.1 100% intergenic (‑195/+112) insA1/rpsT IS1 family protein InsA/30S ribosomal subunit protein S20
?NC_000913 20704 = 0 (0.000)intergenic (‑196/+111) insA1/rpsT IS1 family protein InsA/30S ribosomal subunit protein S20

CATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATGCTTTCTGTGCAGCAGCT  >  NC_000913/20531‑20947
                                                                                                                                                                             |                                                                                                                                                                                                                                                   
tagagtggtcttaagtttaatacctcaatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTgcgc                                                                                                                                                                        >  1:505400‑M2/174‑251 (MQ=255)
         cttaagtttaatacctcaatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCttttt                                                                                                                                                               >  2:1153‑M2/165‑251 (MQ=255)
            aagtttaatacctcaatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCGCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTca                                                                                                                                                             <  2:602418‑M2/89‑1 (MQ=255)
                 taatacctcaatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAg                                                                                                                                                        <  2:23199‑M2/94‑1 (MQ=255)
                     acctcaatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCa                                                                                                                                                   <  2:40453‑M2/99‑1 (MQ=255)
                      cctcaatgtgtatcacaatatccacattctttgtagggggtctgtagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGGGTTCTCTCACGCATCACAAAAGCAGCAGGCAGAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAg                                                                                                                                                  <  2:395091‑M2/100‑1 (MQ=255)
                         caatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgtgcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTGCACAAAGCTTCAGCaa                                                                                                                                               <  1:536548‑M2/103‑1 (MQ=255)
                           atgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAAt                                                                                                                                             >  1:125340‑M2/147‑251 (MQ=255)
                            tgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAAtt                                                                                                                                            >  1:67‑M2/146‑251 (MQ=255)
                                             acattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGttt                                                                                                                           >  2:486786‑M2/129‑251 (MQ=255)
                                               attctttgtagggggtctggagattgagtcgatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTttgt                                                                                                                         >  1:191769‑M2/127‑251 (MQ=255)
                                               attctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTttgt                                                                                                                         <  1:464459‑M2/125‑1 (MQ=255)
                                                     gggagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAATCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCt                                                                                                                   <  2:572054‑M2/131‑1 (MQ=255)
                                                        agggggtatggagattgagtagatattcttgttcagcatgtatcagccgctggttctacgattcttaagacacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCCAATTGGCGATTAAGCCAGTTTGTTGATCtgtg                                                                                                                >  2:379828‑M2/118‑251 (MQ=255)
                                                                            agatattcttgttcatattgtatcagcctatggttttacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGa                                                                                            <  1:173949‑M2/154‑1 (MQ=255)
                                                                                            aatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGtttt                                                                            >  2:298067‑M2/82‑251 (MQ=255)
                                                                                             atgtatcagacgatggttctacgattcttaagccacgacgagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCCGTGTGTTCTCTCACGCATCACAAACGAAGCAGGCATAAAAAAAACCGCTTGCGCGGGCTTTTTCACAAAGATTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGGTAGCCTTATGACGTGCAGCTTTGttttt                                                                           >  2:337244‑M2/81‑251 (MQ=255)
                                                                                               gtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTtgt                                                                         >  1:79437‑M2/79‑251 (MQ=255)
                                                                                                    agccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATc                                                                    <  2:505400‑M2/178‑1 (MQ=255)
                                                                                                                      tcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTg                                                   >  1:214221‑M2/56‑250 (MQ=255)
                                                                                                                              cacgaagagttcagatagtacaacggcatgtctgcaagcacctgcaaCTTTTGACTATCTGGCCACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTgcg                                                                                                                                                                         >  2:65049‑M2/48‑124 (MQ=255)
                                                                                                                              cacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTgcg                                                                                                                                                                         <  1:65049‑M2/77‑1 (MQ=255)
                                                                                                                                      gttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCGTACGGTCCACGATCGGtt                                  <  1:501633‑M2/212‑1 (MQ=255)
                                                                                                                                                  caacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGAAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCCCGATCGGTTGCATTTCGTTa                       >  2:503928‑M2/28‑250 (MQ=255)
                                                                                                                                                         atgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGCGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATGCttt               >  1:366458‑M2/21‑251 (MQ=255)
                                                                                                                                                           gtcctcaagaacctgcaaCAGTTGACTATCTTGCAACCGGCAGTGTGGTCCCTCACGCATCACAAAAGCAGCAGTCATAAAAAAACCCTCTGGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTTATCTGTGCAGTCAGATTAGGCTTAGGACGTGCAGCTTTGGTTTTGTGGATCAGAGCTTTAGCAGCCTGACGGTCCACGTTCGGTTGCATTTCGTTAAATGCTTTc              <  2:91081‑M2/232‑1 (MQ=255)
                                                                                                                                                              tgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATAACAAAAGCAGCAGGCATAAAAAACACCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGATAGACTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATGCTTTCtgtg          >  2:102395‑M2/16‑251 (MQ=255)
                                                                                                                                                                      cctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATGCTTTCTGTGCAGCAGCt  <  1:298067‑M2/244‑1 (MQ=255)
                                                                                                                                                                      cctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATGCTTTCTGTGCAGCAGCt  >  1:119644‑M2/8‑251 (MQ=255)
                                                                                                                                                                             |                                                                                                                                                                                                                                                   
CATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATGCTTTCTGTGCAGCAGCT  >  NC_000913/20531‑20947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.