Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,223,638 T→C intergenic (‑10/‑190) iclR ← / → metH DNA‑binding transcriptional repressor IclR/cobalamin‑dependent methionine synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,223,6380TC100.0% 134.4 / NA 45intergenic (‑10/‑190)iclR/metHDNA‑binding transcriptional repressor IclR/cobalamin‑dependent methionine synthase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (17/28);  total (17/28)

AGTTCGCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCAGCAAAGTGGAACAACTGCGTGCGCAGTTAAATGAACGTAT  >  NC_000913/4223393‑4223874
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                               
aGTTCGCCAACCTGACGCACGAAACCCGGCTGTTGCATCGTGGTTAGCAGGCGGTGGGGCGTGGAATTGGGTATCCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAAGCCACTCCAGTAATTTCAGGCCACGCGGTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCcttttt                                                                                                                                                                                                                                            <  1:568905/251‑1 (MQ=255)
     gCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTa                                                                                                                                                                                                                                       <  1:120414/251‑1 (MQ=255)
     gCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑GTTTCTGCCGCGTTTTGCGGGGATGGGGGGGACCATGTCAGTATCCTTTTTCTGtt                                                                                                                                                                                                                                       >  2:332567/1‑250 (MQ=255)
                 cACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCGCCTTTTTCTGTATCTTGGAAAt‑ca                                                                                                                                                                                                                          <  2:566500/251‑1 (MQ=255)
                   cGAATCCCGGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCTGCTTTTTGCGCCCGTTCCGTGCGTTCCACACTGCCATTGGATTCGGCAATCCACGCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCTACCATGACAGTCTCCTTTTTCTTTAGCGTGGAAAt‑catt                                                                                                                                                                                                                        <  2:318731/251‑1 (MQ=255)
                     aaaCCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCCGTCGCTGGTGCGGTGGCAACGGCGGG‑GTTTCTGTTGCGGTTTGCGGGGATGGGGGCGAACCTGACAGTCTCCTTTTTTTTTATCTGGGGAAt‑catttt                                                                                                                                                                                                                      >  1:195689/1‑251 (MQ=255)
                                 tGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTTGCGGGGATGGGGGCGGCCCTGACAGGCTCCTTTTTCTTTATCGTGGGAAT‑CATTTTCAtttttttttt                                                                                                                                                                                                          >  1:482575/1‑246 (MQ=255)
                                   cATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑a                                                                                                                                                                                                       <  1:254447/251‑1 (MQ=255)
                                       gTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACGCCAGTAATGTCAGGCCACGCGTTAAAGACTGACCCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGTCAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTGCATTTTTATTGTT‑AGCTa                                                                                                                                                                                                   <  1:109747/251‑1 (MQ=255)
                                        gggTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCGGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTCTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTaa                                                                                                                                                                                                  <  1:341246/250‑1 (MQ=255)
                                            tAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGGTTTTTTACC‑CGGTTCGCGGGGGAGGGGGGGAACAAGACAGTCTCCTTTTTTTGTATTGGGGGAAT‑CCTTTTCACTTTTTTTGtttggttaagcc                                                                                                                                                                                               >  1:19744/1‑241 (MQ=255)
                                                 ggCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGt                                                                                                                                                                                         <  2:482575/251‑1 (MQ=255)
                                                 ggCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGGGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGGCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTGCATTTTTATTGTT‑AGCTAATGCAATAGt                                                                                                                                                                                         <  2:298314/251‑1 (MQ=255)
                                                                   tGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGAt                                                                                                                                                                       <  2:461684/250‑1 (MQ=255)
                                                                   tGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTGTTCTGTATCGTGGAAAG‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGAt                                                                                                                                                                       <  1:43524/250‑1 (MQ=255)
                                                                    gggTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACATTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTGTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGa                                                                                                                                                                     <  2:465468/251‑1 (MQ=255)
                                                                          cccGGCTTGTTGCGCCCGTTCCGTGAGTGCCACACTGCCATTGGAGTCGGCAATCCACTCAAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAAt                                                                                                                                                               <  1:343253/251‑1 (MQ=255)
                                                                             ggCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGTTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGtt                                                                                                                                                            <  1:414599/251‑1 (MQ=255)
                                                                                       gcCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGTTGAACAAAtct                                                                                                                                                  <  1:163898/251‑1 (MQ=255)
                                                                                         cAGTTCCGTGAGTGCCCCACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGACACGCGTTAAAGACTGAACCTGGTCAGTCGCTGGTGCGGTGGCCACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGGTCATGACAGTCTCCTGTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCTCa                                                                                                                                                <  1:261920/251‑1 (MQ=255)
                                                                                           gTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCTCATg                                                                                                                                              <  2:267469/251‑1 (MQ=255)
                                                                                                      gCCACACTGCCATTGGATTCGGCAATCCTCTCCAGTAATTTCAGGCCACGCGGTAAAGACTGAACCTGTCCAGGCGCTGGTGCGGTGGCAACGGCGGG‑GTTTCTGGCGCGTTTCGCGTGAATGGGTGCGATCAGGACAGGCTGCTTTTTCTGGTTCGTTGAAAT‑CATTTTCATTTTTAGTGGT‑AGTTAATGCAATAGTTACGGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCTCATGTTGCGtggtgg                                                                                                                                   <  1:537990/251‑1 (MQ=255)
                                                                                                       ccACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑GTTTCTGCCCCGGTTCCCGGGGATGGGGGGGACCCAGGCAGTCTCCTTTTTTTGTATAGGGGAAATTCTTTTTC‑TTTTTTTTTTT‑AACTAATTGAAAAGGTTCTTAAATGCT‑CCGCTGAGTTATAGTTGTACAAATTTCATATTGCgtgggtgg                                                                                                                                  >  1:208163/1‑247 (MQ=255)
                                                                                                              gCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCtttt                                                                                                                           <  1:141499/251‑1 (MQ=255)
                                                                                                                   tGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACca                                                                                                                       <  1:205778/250‑1 (MQ=255)
                                                                                                                         cGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑GTTTCTGCCGCGGTTCGCGGGGATGGGGGCGACCATGACAGTCTCCTTTTTCTTTATCGGGGGAAA‑CATTTTCATTTTTTTTTTT‑TGGTAATGCAATAGTTTATGAACTGAT‑CCGATGGGTTAATGTTTAACAAATCTCCTTTTTCGTGGGGGTCGCTTTTTCCACCGATGc                                                                                                                >  1:212092/1‑251 (MQ=255)
                                                                                                                             aaTCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTTTGCCGCGGTTCGCGGGGATAGGTGCGACCCTGACAGTCTCCTTTTTTTTTATCGTGGGAAT‑AATTTTCCTTTTTTTTGTT‑AGCTAATGAAAAAGATACTTAACTGAT‑CCGCTGAGTTAATGTTGTACAAATCTCATGTTGCGTGGTGGGCGCTTTTTCCACAGATGCggtt                                                                                                            >  1:58059/1‑248 (MQ=255)
                                                                                                                               tccgccctagtcaTTTCAGGCCACGCGTTTAAGACTGACCCTGATCAGTCGCTGGTGCGGTGCCAACGGCGGG‑TTTTCTGCCGCGTGTCGCGTGAATGGGTTCGACCCTGACAGTCTACTTTTTCTGTATCGTTGAAAT‑CATTTTCATTTTTATTGTT‑AGTAAATGCAATAGTTATTGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGTTGGTCGCTTTTACCACAGATGCGTTTa                                                                                                           <  2:422864/238‑1 (MQ=255)
                                                                                                                                     ccAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCGCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGt                                                                                                    <  2:314066/251‑1 (MQ=255)
                                                                                                                                           aTTTAAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑GTTTCTGGCGCGTTTAGCGGGGATGGGGGGGAACATGACAGTCTCCTTTTTCTGTGTCCTGGGAAT‑TATTTTCATTTTTTTTGTT‑TACTAATTCAATAGTTACTGAACTGAT‑CCGACGAGTTAATGTTTAACAAATCTCTTTTTTCTGGGTGGGCGCTTTTTCCACCGATGCGGTTATGCCCGAATGGtt                                                                                              >  1:18833/1‑251 (MQ=255)
                                                                                                                                                  gCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCCTTTTGCGGGGAAGGGGGCGACCATGAAAGTTTCCTTTTTTTTTTTCGTGGGAAT‑CATTTTTATTTTTATTTTTTGGTTAAT‑AAATTGTTACTGAACTGATTCCG‑TTAGTTAATGTTTAAAAAAACTCATGTTTGGTGGTGGGCGCTTTTACCAAAGATGCGGTTATGGCAGTATTGTTTGTTGa                                                                                        >  1:91793/1‑250 (MQ=255)
                                                                                                                                                              aGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCACCGGCGGG‑TTTTCTGCCGCCTTTTGCGGGGATGGGTGGGAACATGACAGGCTCCTTTTTCTGTATCGTGGGAAT‑TCTTTTCATTTTTATTGTT‑AGCTAATGCAATAATTACTGAACTGAT‑CCGCTGAGTTTATGTTGAACAAATATCATTTTGCGTGGGGGTCGCTTTTACCCCAGATGCGTTTATGCCAGTATGGTTTTTTGAATTTTTTTTAAAt                                                                           >  2:52777/1‑251 (MQ=255)
                                                                                                                                                                                 gCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGGATGGGGGCGACCATGACAATCTCCTTTTTCTTTATCGTGGAAAT‑CATTTTCATTTTTTTTGTT‑TGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTTATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCggg                                                        >  1:287105/1‑251 (MQ=255)
                                                                                                                                                                                            ggCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCGAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGTTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGtgtg                                              <  1:541963/250‑1 (MQ=255)
                                                                                                                                                                                             gCAACGGCGGG‑TTTGCTGCCGCGTTTCGCGTGAATGGGTGCTACCATGACAGTCTCCTTTTTCTGGATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTGTTACCACAGATGCGTGTATGCCAGTATGGTTTGTTGAAGTGTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGAGTGag                                            <  2:556112/251‑1 (MQ=255)
                                                                                                                                                                                                    cggG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCAGCaa                                      >  2:484578/1‑250 (MQ=255)
                                                                                                                                                                                                           ttCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGt                                                                                                                                                             <  1:486075/125‑1 (MQ=255)
                                                                                                                                                                                                           ttCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGt                                                                                                                                                             >  2:486075/1‑125 (MQ=255)
                                                                                                                                                                                                               gCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCAGCAAAGTGGaaca                             <  1:413978/249‑1 (MQ=255)
                                                                                                                                                                                                                  gcgTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCAGCAAAGTGGAACAACtgc                        <  1:303901/251‑1 (MQ=255)
                                                                                                                                                                                                                           gggAATGGGTGCGACCATGACAGTCTACTTTTTCTGTATCGTGGCAAT‑CATTTTCATTTTTATTGTT‑AGCTATTGCAATAGTTAATGAACTGAT‑ACGATGCGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTTTTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCAGCACAGTGGAACAACtgcgtgagccgt               >  2:206798/1‑245 (MQ=255)
                                                                                                                                                                                                                              aaTGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGTACTGAT‑CCGATGAGTTAATGTTGAACAAATATCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCAGCAAAGTGGAACAACTGCGAGCGCAGTTa             >  1:415578/1‑250 (MQ=255)
                                                                                                                                                                                                                              aaTGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCAGCACAGTGGAACAACTGCGTGCGCAGTTa             >  2:13309/1‑250 (MQ=255)
                                                                                                                                                                                                                               aTGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCAGCAAAGTGGAACAACTGCGTGCGCAGTTaa            >  1:142594/1‑250 (MQ=255)
                                                                                                                                                                                                                                      cGACCATGACATGCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGAAAGTGTGAGCAGCAAAGTGGAACAACTGCGTGCGCAGTGAAATGAACGt    <  2:465847/251‑1 (MQ=255)
                                                                                                                                                                                                                                        aCCATGACAGTCTCCTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCAGCAAAGTGGAACAACTGCGTGCGCAGTTAAATGAACGTAt  <  2:554286/251‑1 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                               
AGTTCGCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAAT‑CATTTTCATTTTTATTGTT‑AGCTAATGCAATAGTTACTGAACTGAT‑CCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCAGCAAAGTGGAACAACTGCGTGCGCAGTTAAATGAACGTAT  >  NC_000913/4223393‑4223874

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑