Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,558,699 Δ6,790 bp intZ[eutA] intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2558699 2565488 6790 52 [0] [2] 54 intZ–[eutA] intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 25586980 (0.000)52 (0.960) 48/476 0.2 100% intergenic (‑19/‑160) eutB/intZ ethanolamine ammonia‑lyase subunit alpha/putative phage integrase IntZ
?NC_000913 2565489 = 0 (0.000)coding (1396/1404 nt) eutA ethanolamine ammonia‑lyase reactivase EutA

CATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCTAAACACGCCCGTTATTCATCACGCCGAACGCGCCGGATACATGATCGGGGTTATCCAGTCGTTAAATCAAGGTATCCGGTTTTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGACAAGCCCTATAAACTCACCGATTCACT  >  NC_000913/2558472‑2558937
                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                               
cATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtc                                                                                                                                                                                                                          >  1:404515‑M1/1‑227 (MQ=255)
cATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtc                                                                                                                                                                                                                          >  1:285837‑M1/1‑227 (MQ=255)
  tCTTTATAGGCAATCCCCGGATTATTGCTGATGTCCGCTCCGGCCAATTCCCCCAACACCTGCTTTCCCCCCCCGCGCTCCTGTGAGCTTGCCGCTGCGCCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcac                                                                                                                                                                                                                        <  1:311652‑M1/250‑26 (MQ=255)
       aTAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGCCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagagatttcaacgtcaccggcac                                                                                                                                                                                                                  >  1:343576‑M1/1‑220 (MQ=255)
       aTAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAAATGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcac                                                                                                                                                                                                                  >  2:491598‑M1/1‑220 (MQ=255)
            cAATCCCCGGATTATTGCGGTTGCCCGTGACGGTCATTCCCCACCACCCCTGCTTTGCCGCCCCGCGCCCCTGTGAGCTGGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccg                                                                                                                                                                                                             <  2:328276‑M1/251‑37 (MQ=255)
             aaccaccGGATTATTGCGGATGTCCGTTACGGCCATTTCCGACACCACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGCCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTGTAGCCAGCACCTCGTTTGCATCCTTAAACTGATATACATTGCCGAGCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccga                                                                                                                                                                                                            <  1:333188‑M1/248‑38 (MQ=255)
                cACCGTATTATTGCGGTTGTCCGCTCCGGTCATTTCCGCCACCCCCGGTTGTGCCCCCCCGCGCTCCTGTGATCTGGCCGCTGCGCCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatc                                                                                                                                                                                                          <  2:371462‑M1/250‑40 (MQ=255)
                             cGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcccaaccgatccgccaaaaagaggc                                                                                                                                                                                            >  1:382924‑M1/1‑198 (MQ=255)
                                 tggccggtacgggcaTTCCCGACAACCCCTGCTTTCCCCCCCCGCGCCACTGTGGCCTTGCCGCTGGGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTACACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgta                                                                                                                                                                                         <  1:25084‑M1/243‑57 (MQ=255)
                                  gTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgt                                                                                                                                                                                                                           >  1:19691‑M1/1‑193 (MQ=255)
                                     cGCTACGGTCATTTCCGACAACCCCTGCTTGCCCGCCACGCCCTCCTGTGAGCTTGCCGCGGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaat                                                                                                                                                                                    <  1:288803‑M1/251‑62 (MQ=255)
                                                        aacaCCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACACTGTGGTCTTTAGTTTCATAAGCCGTTCCCTCAGGCAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcc                                                                                                                                                                 >  2:127018‑M1/1‑171 (MQ=255)
                                                                    gccgccACGCGCTCCTGTGAGCCTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCCGTTCGTTGGCTTTAGCCCGCCCCTCTTTTACATCCTTAAACTGATATACATTGCCGCACAATGTGGTCTTTAGTTTCATAAGTCGTTCACTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcccaaccgatccgccaaaaagaggcgtcccaatgtcgatatagtcccccgcgcggccactcccc                                                                                                                                                     >  2:503298‑M1/1‑159 (MQ=255)
                                                                     ccgccCCGCGCCCTTGTGAGCTGGCGGCTGCGCCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCGTAAACTGATATACATGGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcactt                                                                                                                                                    <  2:317923‑M1/251‑94 (MQ=255)
                                                                       gccACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacagccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcg                                                                                                                                                  >  1:58956‑M1/1‑156 (MQ=255)
                                                                         cACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaactgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtc                                                                                                                                                >  1:290909‑M1/1‑154 (MQ=255)
                                                                         cACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtc                                                                                                                                                <  1:115675‑M1/251‑98 (MQ=255)
                                                                              gcTCCTGTGAGCTTGCCGCGGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCATCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatga                                                                                                                                           <  1:290192‑M1/251‑103 (MQ=255)
                                                                                    gtgaccgtgccgctgCCACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTCTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgcca                                                                                                                                     <  1:8105‑M1/244‑109 (MQ=255)
                                                                                    gtgAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgcc                                                                                                                                      >  2:215706‑M1/1‑143 (MQ=255)
                                                                                    gggagCGTGCCGCGGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGTAAGgaaatgcgagtgatttcaccgttgccggcacaaccgatccgccaaaaagaggcgtaccaatggcgatatagtcccccgcgcggacaatcacttcgtcaatgactgcc                                                                                                                                      <  1:345302‑M1/248‑108 (MQ=255)
                                                                                      ggtcgtgctgctgcgccgcCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccacc                                                                                                                                   <  2:102512‑M1/242‑111 (MQ=255)
                                                                                      gAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGCACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaac                                                                                                                                   >  1:321175‑M1/1‑141 (MQ=255)
                                                                                                 cgccacgccCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacagccgatccgccaaaaagaggcgtaccaatgtcgatataggcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgtt                                                                                                                         <  2:58956‑M1/246‑121 (MQ=255)
                                                                                                                      ccccGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacat                                                                                                   <  2:285837‑M1/251‑143 (MQ=255)
                                                                                                                           aaCGCAGTTAGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgccc                                                                                               >  1:124519‑M1/1‑104 (MQ=255)
                                                                                                                            aCGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccag                                                                                             <  1:566984‑M1/251‑149 (MQ=255)
                                                                                                                                aGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaaaaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacggtagttgttgtagctgtgggcgcaacaacatgcccagagct                                                                                         <  1:528062‑M1/251‑153 (MQ=255)
                                                                                                                                     gTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttacc                                                                                    >  1:344870‑M1/1‑94 (MQ=255)
                                                                                                                                      ttGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCGGAACAATGTGGTCTTTAGTTTCATAAGACGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatacgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagatttacc                                                                                    >  1:322239‑M1/1‑93 (MQ=255)
                                                                                                                                       tGGCTTTAGCCAGCCCCTCTTTTACATCCTGAAACTGATATACATGGCCGAACAATGTTGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttggtgtagctgttggcgcaacaacatgcccagagctttacca                                                                                   <  2:322239‑M1/250‑159 (MQ=255)
                                                                                                                                          cTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagt                                                                               >  1:310363‑M1/1‑89 (MQ=255)
                                                                                                                                          cTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagt                                                                               >  1:26096‑M1/1‑89 (MQ=255)
                                                                                                                                                    cACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaccaacatgcccagagctttaccaaagtcctgcccggc                                                                     >  2:179227‑M1/1‑79 (MQ=255)
                                                                                                                                                           tttACATCCTTATACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgttggcgcaccaacatgcccagagctttaccaaagtcctgcccggcccccacc                                                              >  2:71421‑M1/1‑72 (MQ=255)
                                                                                                                                                               cATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagc                                                           >  1:155547‑M1/1‑68 (MQ=255)
                                                                                                                                                                   cTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccccccgcagggg                                                       >  1:221400‑M1/1‑64 (MQ=255)
                                                                                                                                                                      aaaCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatg                                                   <  1:260726‑M1/251‑191 (MQ=255)
                                                                                                                                                                       aaCTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgc                                                  >  1:151647‑M1/1‑60 (MQ=255)
                                                                                                                                                                        aCTGATATACCTTGCAGACCAATGTGGTCTTTAGCTTCATCAGTCGTTCCCTAAGGAAGgaaatgagagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccacccgcaggggatgcg                                                 >  2:106266‑M1/1‑59 (MQ=255)
                                                                                                                                                                           gATATACATAGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggat                                              >  2:397891‑M1/1‑56 (MQ=255)
                                                                                                                                                                              ataCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttccccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcg                                           <  2:124519‑M1/251‑199 (MQ=255)
                                                                                                                                                                                 cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcgga                                         >  1:438758‑M1/1‑50 (MQ=255)
                                                                                                                                                                                           cAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgac                              <  1:215706‑M1/251‑212 (MQ=255)
                                                                                                                                                                                               gtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaa                           <  2:155547‑M1/250‑215 (MQ=255)
                                                                                                                                                                                                           ttCATAAGTAGTTCCCTCAGAAAGgaactgcgagtgatttcaccgtcaccggcacaaccgctccgccaacaagaggcgtaccaatgtcgatatagtcccccgcgcggacaataacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaacgcg              >  2:291545‑M1/1‑24 (MQ=255)
                                                                                                                                                                                                            tCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaacgcgt             >  1:45196‑M1/1‑23 (MQ=255)
                                                                                                                                                                                                             cATAAGTCGTTCCCCCAGGAAGgaaatgcgtgtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcgggcagtcacttctgcaatgactgctaacggtagttgttgtagctgggggcgcaacaacatgcccagtgctttaccaaagtcctgcccggccaccaccagcaggggaggctgattcggaaaacgcgagagtaaatcgtccaacgcgtt            <  2:540830‑M1/251‑230 (MQ=255)
                                                                                                                                                                                                              aTAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaacgcgttg           >  1:450685‑M1/1‑21 (MQ=255)
                                                                                                                                                                                                                    cGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaacgcgttgatgacc     <  1:71421‑M1/251‑237 (MQ=255)
                                                                                                                                                                                                                       tCCCTCAGGAAGgacatgcgagtgctttcaccgtcaccggcacaaccgatccgccaaacagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccacagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgcccaacgcgttgctgaccgtc  >  2:273063‑M1/1‑12 (MQ=255)
                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                               
CATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCTAAACACGCCCGTTATTCATCACGCCGAACGCGCCGGATACATGATCGGGGTTATCCAGTCGTTAAATCAAGGTATCCGGTTTTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGACAAGCCCTATAAACTCACCGATTCACT  >  NC_000913/2558472‑2558937

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: