New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 566774	47 (0.840)	20 (0.360)	13/488	1.9	29.9%	pseudogene (91/93 nt)	renD	protein RenD
	?	NC_000913	568036 =	47 (0.840)					pseudogene (2/213 nt)	renD	protein RenD

ATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTAC  >  NC_000913/567789‑568280                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                     aTGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAAGAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGCCCATATTACGTGGGTAGGATCAACCAg                                                                                                                                                                                                                                                   <  2:183339/251‑1 (MQ=14)     gtccatatgactgcgagaattaaccgtggtgaggcgatccctgaaccagtaaaacaacttcctgtcatgggcggtagacctctaaatcgtgcacaggctctggcgaagatcgcagaaatcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATa                                                                                                                                                                                                                                               <  2:22148‑M2/8‑1 (MQ=255)        catatgactgcgagaattaaccgtggtgaggcgatccctgaaccagtaaaacaacttcctgtcatgggcggtagacctctaaatcgtgcacaggctctggcgaagatcgcagaaatcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATAAAt                                                                                                                                                                                                                                            <  1:354916‑M2/11‑1 (MQ=255)         aaaaGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCCGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGAAGGGTCAACCAGCATAAATc                                                                                                                                                                                                                                           >  2:193516/1‑251 (MQ=21)             gactgcgagaattaaccgtggtgaggcgatccctgaaccagtaaaacaacttcctgtcatgggcggtagacctctaaatcgtgcacaggctctggcgaagatcgcagaaatcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATAAATCAgg                                                                                                                                                                                                                                        <  2:173131‑M2/15‑1 (MQ=255)             gactgcgagaattaaccgtggtgaggcgatccctgaaccagtaaaacaacttcctgtcatgggcggtagacctctaaatcgtgcacaggctctggcgaagatcgcagaaatcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATAAATCAGGc                                                                                                                                                                                                                                       <  1:132126‑M2/16‑1 (MQ=255)                tgcgagaattaaccgtggtgaggcgatccctgaaccagtaaaacaacttcctgtcatgggcggtagacctctaaatcgtgcacaggctctggcgaagatcgcagaaatcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATAAATCaggccgc                                                                                                                                                                                                                                    >  1:97104‑M2/233‑248 (MQ=255)                 gcgagaattaaccgtggtgaggcgatccctgaaccagtaaaacaacttcctgtcatgggcggtagacctctaaatcgtgcacaggctctggcgaagatcgcagaaatcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgcggcgctaacaggcgcaacagtaaCCAGCATAAATCAGGCcgcg                                                                                                                                                                                                                                   <  1:494201‑M2/20‑1 (MQ=255)                     gaattaaccgtggtgaggcgatccctgaaccagtaaaacaacttcctgtcatgggcggtagacctctaaatcgtgcacaggctctggcgaagatcgcagaaatcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATAAATCAGGCCGCGGCTa                                                                                                                                                                                                                               <  1:440545‑M2/24‑1 (MQ=255)                      aattaacagtggtgaggcgatccctgaacccgtaaaccaacttcctgtcatgggcggtagacttctaactcgtgcacaggctctggcgaagatcgcagaactcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggccattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATACATCAGGCCGCGGCTa                                                                                                                                                                                                                               >  2:213552‑M2/227‑250 (MQ=255)                       aCGATAATGCCTGCGTGGAAAGCTTCTTTCATGCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTGAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTaaa                                                                                                                                                                                                                             <  1:164104/251‑1 (MQ=255)                          aTAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATg                                                                                                                                                                                                                          >  1:138104/1‑251 (MQ=255)                          aTAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATg                                                                                                                                                                                                                          >  2:170395/1‑251 (MQ=255)                             cgtggtgaggcgatccctgaaccagtaaaacaacttcctgtcatgggcggtagacctctaaatcgtgcacaggctctggcgaagatcgcagaaatcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATAAATCAGGCCGCGGCTAAAATggca                                                                                                                                                                                                                       <  1:214886‑M2/32‑2 (MQ=255)                               gCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGcgcg                                                                                                                                                                                                                     <  1:139643/251‑1 (MQ=255)                               gCCTGCGTGGAAAGCTTCTTTCAGTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGcgcg                                                                                                                                                                                                                     <  2:334513/251‑1 (MQ=255)                                 cTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGCGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGGACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGGAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCggg                                                                                                                                                                                                                   >  1:364113/1‑251 (MQ=255)                                  tGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAAAGCGGGAAACGGTGTTTAATTATATCGAATGAGATTACAATCGGTGGCGGAGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGCAAACAAGAACCTCGCTTAGGCCTTAGTCCATATTAAGTGGGGAGGCTCAACCAACATAACTCAAGCTGCGGCGAAAATGgcgctggg                                                                                                                                                                                                                  >  1:556171/1‑247 (MQ=11)                                   gCGTGGAAAGCTTCTTTCATGCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTGTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAAGGGCGCGGGCa                                                                                                                                                                                                                 <  2:69153/251‑1 (MQ=255)                                        gatccctgaaccagtaaaacaacttcctgtcatgggcggtagacctctaaatcgtgcacaggctctggcgaagatcgcagaaatcaaagctaagttcggactgaaaggagcaagtgtaggacgggcaaagaggcaattattcattccctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATAAATCAGGCCGCGGCTAAAATGGCACGGgcaggtct                                                                                                                                                                                                            <  2:22369‑M2/43‑4 (MQ=255)                                        gAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTCAAATGGCGCGGGCAGGAAt                                                                                                                                                                                                            >  1:154580/1‑251 (MQ=255)                                         aaaGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGGACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCACGGGCAGGAATc                                                                                                                                                                                                           >  1:448818/1‑251 (MQ=255)                                         aaaGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATc                                                                                                                                                                                                           >  1:112405/1‑251 (MQ=255)                                           aGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTCTCCGCCGGGAAATAATGCGGGAACCGGTGTTTAATTATATCGACTGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAAAAAGAACCTCGCCTAGGCCTGTGTCCATATTACGTGGGCAGGATCCACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGACAGGAATCCt                                                                                                                                                                                                         >  1:212554/1‑251 (MQ=17)                                               tcttTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGt                                                                                                                                                                                                      <  1:170395/250‑1 (MQ=255)                                               gaaccagtaaaacaacttcctgtcatgggcggtagacctctaaatcgtgcacaggctctggcgaagatcgcagaaatcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATAAATCAGGCCGCGGCTAAAATGgcacgggcaggtcttctggt                                                                                                                                                                                                      <  1:173544‑M2/49‑10 (MQ=255)                                                aaccagtaaaacaacttcctgtcatgggcggtagacctctaaatcgtgcacaggctctggcgaagatcgcagaaatcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATAAATCAGGCCGCGGCTAAAAtggcacgggcaggtcttctggtta                                                                                                                                                                                                    <  1:466205‑M2/51‑12 (MQ=255)                                                   cagtaaaacaacgtcctgtcatgggcggtagacctctaaatcgtgcacaggctctggcgaagatcgcagaaatcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATAAATCAGGCCGCGGCTAaaatggcacgggcaggtcttctggttatcg                                                                                                                                                                                                 <  1:203870‑M2/54‑15 (MQ=255)                                                            gAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGGGGCGTCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGGTCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTaa                                                                                                                                                                                          <  1:193516/249‑1 (MQ=255)                                                                  ggAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGTGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCGTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGTTCTgg                                                                                                                                                                                   <  1:457977/250‑1 (MQ=255)                                                                      catgggcggtagacctctcaatcgtgcacaggctctggcgaagatcgcagaaatcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATAAATCAGGCCGCGGCTAAAATGGCACGGGCAGGTCTTCTGGTTATCGAAGGTAAGGTCTGGCGAAc                                                                                                                                                                              >  2:352058‑M2/179‑251 (MQ=255)                                                                       atgggcggtagacctctaaatcgtgcacaggctctggcgaagatcgcagaaatcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATAAATCAGGCCGCGGCTAAAATGGCACGGGCAGGTCTTCTGGTTATCGAAGGTAAGGTCTGGCGAACg                                                                                                                                                                             <  1:304736‑M2/74‑1 (MQ=255)                                                                            cggtagacctctaaatcgtgcacaggctctggcgaagatcgcagaaatcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATCAATCAGGCCGCGGCTAAAATGGCACGGGCAGGTCTTCTGGTTATCGAAGGTAAGGTCTGGCGAACGgtgt                                                                                                                                                                         >  1:366100‑M2/173‑250 (MQ=255)                                                                                           aTCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTa                                                                                                                                                          <  1:109901/250‑1 (MQ=255)                                                                                               gcacaggctctggcgaagatcgcagaaatcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATAAATCAGGCCGCGGCTAAAATGGCACGGGCAGGTCTTCTGGTTATCGAAGGTAAGGACTGGCGAACGGTGTATTACCGGTTTGCTACcagg                                                                                                                                                     >  2:363576‑M2/154‑250 (MQ=255)                                                                                                cacaggctctggcgaagatcgcagaaatcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATAAATCAGGCCGCGGCTAAAATGGCACGGGCAGGTCTTCTGGTTATCGAAGGTAAGGTCTGGCGAACGGTGTATTACCGGTTTGCTAccaggg                                                                                                                                                    >  2:442339‑M2/153‑249 (MQ=255)                                                                                                       ataatacgtacAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCAGCGACACAGTTGGTGTGGCGGCCTCAGTTCCGCACAATTGGAAAACAAGACCCTAGCTTAGGCCTGTGTCCATATTAAGTGGGGAAGATCAACCCGCATAACTCAGGCTGCGGCTAAATTGGCGGTGGGAGGAATCCTGGACGTTGATGGTAAGGTCAGTCGGACGGTGGCTTTCCAGTTCGCTCCCCAAGAAGAATg                                                                                                                                             >  2:115956/11‑251 (MQ=9)                                                                                                       ataatGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCCCGCTTAGGCCTGTGTCCATATTACGTGGGCAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGACGTTGATGGTAAGGACTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGGATg                                                                                                                                             >  1:527315/1‑251 (MQ=255)                                                                                                            gCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGggaa                                                                                                                                         <  1:95441/250‑1 (MQ=255)                                                                                                                   aCGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGGGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCGGGCGAACGGTGTATTAACGGTTCGCTACCCGGGAAGAATGGGAAGGAAAggg                                                                                                                                 >  1:219155/1‑250 (MQ=255)                                                                                                                    gcagaaatcaaagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATAAATCAGGCCGCGGCTAAAATGGCACGGGCAGGTCTTCTGGTTATCGAAGGTAAGGTCTGGCGAACGGTGTATTACCGGTTTGCTACCAGGGAAGAACGGGAAGGaaagatg                                                                                                                                >  1:403154‑M2/133‑248 (MQ=255)                                                                                                                        gtTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGc                                                                                                                             <  2:448818/250‑1 (MQ=255)                                                                                                                              aagctaagttcggactgaaaggagcaagtgtatgacgggcaaagaggcaattattcattacctggggacgcataatagcttctgtgcgccggacgttgccgcgctaacaggcgcaacagtaaCCAGCATAAATCAGGCCGCGGCTAAAATGGCACGGGCAGGTCTTCTGGTTATCGAAGGTAAGGTCTGGCGAACGGTGTATTACCGGTTTGCTACCAGGGAAGAACGGGAAGGAAAGATGAGCAcgaacc                                                                                                                      >  1:124847‑M2/123‑249 (MQ=255)                                                                                                                                    cGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGAtt                                                                                                                 <  2:58095/250‑1 (MQ=255)                                                                                                                                             ttACAATCGCTGGCGGCGGCACAGTTGGCGTGGCGGCCTCAGTCCGGCACAATTTGCCAACAAGCACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAAAGGGGCATTCCCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGGGAGCACGAATCTGATTTTTAAGGAgt                                                                                                       >  2:334418/1‑251 (MQ=37)                                                                                                                                                    cGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCTGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGcc                                                                                                 <  1:203238/250‑1 (MQ=255)                                                                                                                                                         gcggcggcACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGGGGGTAGGAACAACCAGCATAAATCCGGCTGAGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGGTGTTGGTAAGGTTTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAGTGGGGAGGAAAGGGGAGCACGAATCTGGTTTTTAAGGAGTGTCGCCAGAGTg                                                                                           >  1:297766/1‑251 (MQ=37)                                                                                                                                                          cggcgacACAGTTGGTGTGCCGGCCTCAGGCCGGAACAATTTGGAAACAAGCACCTAGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCCGCCTAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGAAAGGGTTGGGGAACGGGGTATTACCGGTTCGCTAGCCGAGAAGAATGGGAAGGGAAGGGGAGCACGAATCTGGTTTTTCAGGGGTGGCGCCCGAGTGc                                                                                          >  2:43692/1‑251 (MQ=21)                                                                                                                                                              ggcACAGTTGGTGTGGCGGCCTCATTCCGTAAAAATTTGAAAAACAGAACCTCGCTTAGGACTGTGTCCATATTACGCGGGTAGGATCAACCAGCATAAATCAGGCTGAGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGACTGGCGGACGGTGTATTACCGGTTCGCTTCAAGAGAAGAATGGGAAGGAAAGGAGAGCACGAATCTTGTTTTTAAGGAGTGTCGGCAGAGTGCcgcg                                                                                      >  2:49978/1‑251 (MQ=255)                                                                                                                                                                                     aGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGtat                                                                >  1:87673/1‑250 (MQ=255)                                                                                                                                                                                       tCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGtatat                                                              >  1:144081/1‑250 (MQ=255)                                                                                                                                                                                       tCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATAAACAAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGGAAGGTAGGGCGAACGGGGTATTACCGGTTCGATAACAGAGAAGAATGGGAAGGAAAGGGGAGCAAGGATGTGATTTTTAAGGAGTGTGGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGtatat                                                              >  2:450359/1‑250 (MQ=38)                                                                                                                                                                                       tCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTAAATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGAGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTAATTTTTACGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGAATTGAGGGtatat                                                              >  1:499064/1‑250 (MQ=255)                                                                                                                                                                                                aTTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGATTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGAGTATATAAAAAAACAt                                                    <  2:41373/251‑1 (MQ=255)                                                                                                                                                                                                      aaaCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGAACAACCAGCATAAATCAGGCGGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAAGGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGGCGCCAGAGGGCCGCGATGAAACGGGTATTGa                                                                      <  1:483155/227‑1 (MQ=255)                                                                                                                                                                                                      aaaCAAGAACATCGCTTAGGCCTGTGTCCATATTCGGTGGGTAGGATCAACCAGCATACATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGCTGGTAAGGTCTGGCGAACGGTGTATTACCGGCTCGCTACCAGAGAAGAATGGGCAGGCAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGa                                                                      >  2:483155/1‑227 (MQ=255)                                                                                                                                                                                                               ccTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAat                                     <  1:239525/251‑1 (MQ=255)                                                                                                                                                                                                                cTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAatg                                    >  2:55434/1‑251 (MQ=255)                                                                                                                                                                                                                  cGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAatgat                                  <  1:247647/251‑1 (MQ=255)                                                                                                                                                                                                                       aGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAAc                             <  1:55434/251‑1 (MQ=255)                                                                                                                                                                                                                          ccTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAgg                          >  2:374472/1‑251 (MQ=255)                                                                                                                                                                                                                             gtgtCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTGTGGCGAACGGTGTATTACCGGTTCGCTACCAGATAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGGATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGtga                       <  1:43692/251‑1 (MQ=255)                                                                                                                                                                                                                                    tatTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGCGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGtgagttgagt                >  1:505432/1‑251 (MQ=255)                                                                                                                                                                                                                                    tatTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGtgagttgagt                >  1:83998/1‑251 (MQ=255)                                                                                                                                                                                                                                    tatTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGtgagttgagt                >  1:253304/1‑251 (MQ=255)                                                                                                                                                                                                                                             ggTAGGATCAACCAGCATACATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTgt       >  1:152410/1‑251 (MQ=255)                                                                                                                                                                                                                                                  gATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAGCACAATGATGAAACAGGTGAGTTGAGCTCAAACTGTAGTAc  <  1:175078/251‑1 (MQ=255)                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                     ATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTAC  >  NC_000913/567789‑568280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.