| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 676,814 | Δ11,037 bp | IS5‑mediated | [ybeR]–gltI | [ybeR], djlB, ybeT, ybeU, djlC, hscC, rihA, gltL, gltK, gltJ, sroC, gltI |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 676814 | 688823–687848 | 11035–12010 | 38 [0] | [4] 5 | [ybeR]–[insH3] | [ybeR],djlB,ybeT,ybeU,djlC,hscC,rihA,gltL,gltK,gltJ,sroC,gltI,[insH3] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 273955 = | NA (NA) | 38 (0.680) | 36/490 | 0.5 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 676813 | 0 (0.000) | coding (103/708 nt) | ybeR | DUF1266 domain‑containing protein YbeR | |||||
TTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGGTACATGCTTTTTTGACCTTTCTTCCTCATGGGGAATTGATGACCGTGATGACCTGCTGCGCACAATTCACCGAATGATCGATAACGGTCATGCCGCTCGGTTGGCAGGGTTTTATCACCGCTGGTTTCGTTATTCGCCATGTGAATGGCGTGACTATCTTGCTGAACTAAATGAGCAAGGTCAGGCTTATGCGCAATTTGTCGCCAGCACCGCCGAATGCTGTGGCGAAGGGGGAA > NC_000913/676585‑677050 | tttttATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcgggg < 1:54546‑M2/250‑22 (MQ=255) ttATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGCAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaat < 2:95786‑M2/251‑26 (MQ=255) ttCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctc < 2:126024‑M2/251‑33 (MQ=255) ttCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctc < 1:405914‑M2/251‑33 (MQ=255) ccATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcg > 2:142127‑M2/1‑217 (MQ=255) ttttGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATCAACGAGCCTCGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgactaagcggggaaattcttctcggctg < 2:391883‑M2/250‑38 (MQ=255) gCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactc > 1:126024‑M2/1‑209 (MQ=255) cGTAAGAATTATTTTATGCGTATTATGTCGAGACAGAAACGTATAAATCAACGAGCCTAGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGCTAACTTATATGGACATGAAGTCCCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTAATCACCCAAAATGTATTTAGggaaggtgcgcataagcggggaaattcttctcggcggactc < 2:356251‑M2/249‑42 (MQ=255) agtatggCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt > 1:296676‑M2/3‑187 (MQ=255) atGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttg < 2:288548‑M2/249‑66 (MQ=255) taaataaaCGAGCCTCGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccggttttttctcccgta < 2:306267‑M2/250‑86 (MQ=255) ataaaCGAGCCTCGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg > 2:422941‑M2/1‑162 (MQ=255) cGCAAGGCGGCGAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagtctattttttctcccgtaaatgccttgaatca > 1:463731‑M2/1‑150 (MQ=255) aTGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATAGTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAAGGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctat > 1:86073‑M2/1‑146 (MQ=255) tCATTTAATGAATATTTAAGGACAAATTATATGGACATGGAGTCTCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgcctcagtcatttcatttcttcatggttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttct < 2:102003‑M2/251‑119 (MQ=255) aTGAATATTTATGGATAACATATATGGACCGGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGCTGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaatgtgcgaataagcggggaacttcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccat < 2:387250‑M2/251‑126 (MQ=255) tGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggcaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcggcctatttagaccgtttcttcgccatt < 1:299907‑M2/251‑127 (MQ=255) gATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattccatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccctttaaggcgttatc < 2:170536‑M2/251‑139 (MQ=255) aTAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcc > 1:548367‑M2/1‑112 (MQ=255) aTTATATGGCCATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccctttaaggcgttatcccc < 1:115745‑M2/249‑142 (MQ=255) atatGGACATGGAGTCGCAATAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt < 1:221464‑M2/251‑147 (MQ=255) ggACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATTGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagctgggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttcg > 2:22023‑M2/1‑101 (MQ=255) tGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAGATAGGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgcataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtg < 2:247590‑M2/248‑153 (MQ=255) cGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCAAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgacttgcatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctc < 1:279207‑M2/251‑162 (MQ=255) cAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctccc > 2:245094‑M2/1‑88 (MQ=255) cACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttg < 1:88171‑M2/251‑180 (MQ=255) tCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgac > 1:100184‑M2/1‑67 (MQ=255) tCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgac < 2:100184‑M2/106‑40 (MQ=255) cACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcc > 1:111209‑M2/1‑65 (MQ=255) tgctgcTCACCTTCGCATTCATCACCCACCCTGTATTTAGggacggtgcgaataagcggggacattcttctcggccgcctcagtcctttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaatgcgttatccccagtttttagtgagatctctcccactgacgtatcctttggtccgcccgaaacaggttggccagcgtgaat < 2:81235‑M2/250‑211 (MQ=255) gCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatgttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataa > 1:42912‑M2/1‑39 (MQ=255) ttACCTTCGCATTCATCCCACAACATGTATTTAGggaaggtgcgaataagcggggcaattcttctcggctgactaagtcatttcatttcttcatgtttgagccgattttttctcccgtcaatgccttgaatctgcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtctcatttggtccgcccgaaaaaggttggcccgcgtgaataacatac < 2:247629‑M2/251‑218 (MQ=255) tACCTTCGCCTTCATCACCCAAAATGTATTTAGggaaggcgcgaataagcggggacattcttctcggctgactcaggcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaataagactatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgccgtatcatttggtccgcccgaaacaggttggccagcgtgattaacatcgc < 2:377762‑M2/251‑219 (MQ=255) aCCTTCGCATTCATCACCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgcc > 1:162312‑M2/1‑32 (MQ=255) atcaCCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatctccagttggttatcg > 2:349110‑M2/1‑20 (MQ=255) caCCCAAAATGTATTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgtt < 2:428568‑M2/251‑234 (MQ=255) cAAAATGTATTTAGggaaggtgcgaataatcggtgaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctccgccatttaaggctttatccccagtttttagttagatctctcccactgacgtatcatttggtccgctcgaaacaggttggccagcgtgaataacagcgccaggtggttatcgtttttc > 1:381816‑M2/1‑14 (MQ=255) aaaTGTATTTAGggaaggtgcgaataagcggtgaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccctttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcttttggtccgcccgaaacagtttggccagcgtgaataacatcgccagttggttatcgtttttc < 2:31045‑M2/249‑238 (MQ=255) | TTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGGTACATGCTTTTTTGACCTTTCTTCCTCATGGGGAATTGATGACCGTGATGACCTGCTGCGCACAATTCACCGAATGATCGATAACGGTCATGCCGCTCGGTTGGCAGGGTTTTATCACCGCTGGTTTCGTTATTCGCCATGTGAATGGCGTGACTATCTTGCTGAACTAAATGAGCAAGGTCAGGCTTATGCGCAATTTGTCGCCAGCACCGCCGAATGCTGTGGCGAAGGGGGAA > NC_000913/676585‑677050 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |