Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 3,572,319 | T→G | E395A (GAA→GCA) | glgB ← | 1,4‑alpha‑glucan branching enzyme |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,572,319 | 0 | T | G | 97.5% | 239.1 / ‑4.2 | 80 | E395A (GAA→GCA) | glgB | 1,4‑alpha‑glucan branching enzyme |
Reads supporting (aligned to +/- strand): ref base T (1/1); new base G (47/30); total (49/31) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
AGACCGCCCATATCCTGCGGACGAGAAACGCCAGGGAAATCGGTAGACTCCTCAGCCATTGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCGGCATCAATGAAATAACGGAAGTCGTCGCG > NC_000913/3572079‑3572560 | aGACCGCCCATATCCTGCGGACGAGAAACGCCAGGGAAATCGGTAGACTCCTCAGCCATTGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGt > 1:286920/1‑250 (MQ=255) cccGCCCATATCCTGCGGACGAGAAACGCCGGGGAAATCGGTAGACTCCTCAGCCATTGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCGCTCTTTACGGCTGTGGGCGCGATAAATTAGTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTaaa < 1:37612/250‑1 (MQ=255) ccATATCCTGCGGACGAGAAACGCCAGGGAAATCGGTAGCCTCCTCAGCCATTGTCACCGCACCGGAAACATGCTCACCAAGCATACGGTTGGTATTACGCCAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAACCGTGCAATACAGTAAAGagcg > 2:56061/1‑251 (MQ=255) ccTGCGGACGAGAAACGCCAGGGAAATCGGTAGACTCCTCAGCCATTGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTAcc < 2:209138/250‑1 (MQ=255) cTGCGGACGAGAAACGCCAGGGAAATCGGTAGACTCCTCAGCCATTGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGGAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACcgc > 1:194410/1‑250 (MQ=255) tGCGGGCGAGAAACGCCAGAGAAATCGGTAGACTACTCAGCAATTGTCACCGCACCGGAAACATGATCACAAAGAATACGGTTGGTATTACGCAAGAATTCAATCGATTCAAGCTTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCACCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGAATCGACG‑GCAAGCGCATCAATACCAAAACATGGCATCCAGTAAAGcgcgataacga > 2:66071/1‑243 (MQ=255) gCGGACGAGAAACGCCAGGGAAATCGGTAGACTCCTCAGCCATTGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACcga < 1:331165/249‑1 (MQ=255) gaAACGCCAGGGAAATCGGTAGACTCCTCAGCCATTGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGAGCGTTACCGACGAGGAGGtt > 1:351234/1‑251 (MQ=255) gaAACGCCAGGGAAATCGGTAGACTCATCAGCAATTGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAgct > 2:302641/1‑249 (MQ=255) aCGCCAGGGAAATCGGTAGACTCCTCAGCCATTGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGTGCGTTACCGACGAGGAAGTTACt < 1:350086/251‑1 (MQ=255) gCCAGGGAAATCGGTAGACTCCTCAGCCATTGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCC‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGGTACCGACGCGGAAGATACTg > 2:38370/1‑250 (MQ=255) ccAGGGAAATCGGTAGACTCCTCAGCCATTGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCC‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGCCGAGGAAGTTAATGAc > 2:148648/1‑251 (MQ=255) aaTCGGTAGACTCCTCAGCCATTGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACgg > 1:444150/1‑251 (MQ=255) aTCGGTAGACTCCTCAGCCATTGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAACTTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGAGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGAGAAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGc > 1:389042/1‑251 (MQ=255) aTCGGTAGACTCCTCAGCCATTGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGc > 1:320848/1‑251 (MQ=255) gacacctcattcATTGTCACCGCACCGTAAACCGGCTCACCAAGAATACTGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGGTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCAGCGCATCGACGCGCA‑GCGCATCAATTCCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATa < 2:355721/240‑1 (MQ=255) gCCATTGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGAt < 1:388334/251‑1 (MQ=255) ccATTGTCACCTCACCGGAACCCTGCTCCCCAAGAATCCGTTTGGTATTCCGCAAGAATGCAATCTCTTCAAGATTTCCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATc < 2:378275/251‑1 (MQ=255) aTTGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAACACGAGCAATCCAGTAAAGCGCGTAACCGACGAGGAAGTTACTGACTTCACGGCGCCCATAGTTGTAGATc > 2:391078/1‑249 (MQ=255) tGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCTCGTTACCGTCGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGc < 1:23244/250‑1 (MQ=255) caccgcaccgGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCgtgt < 2:444150/251‑1 (MQ=255) gcaccgGCAACCTGCACACAAAGAAAAAGGTTGGTATTACGCAAGAACTCAATCGCTTCAAGATCCTCGAGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTAAGGCTGTAGTCGCGATAAATCATTGACGCCCCCGCATAGACGCCCG‑GCGCATCAATAACAAAACGCTCAATCCAGTAAAACGCGTTACCGAAGAGGACGTTACTGACTTCACGGCCACCATAGTCTTAGATCAGCGTGttacc > 2:449183/1‑248 (MQ=255) cgGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGCCGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTcc > 2:297292/1‑251 (MQ=255) ggAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTAAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATACACTCCCCCTCTTTACGGCTGTAGTCGCGATACATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCAAGTAAAGCGCGATACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCt > 1:226016/1‑251 (MQ=255) gAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCtg < 1:89631/251‑1 (MQ=255) gAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGAGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGCCGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCtg > 1:308076/1‑251 (MQ=255) aaaCCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCtg > 1:72680/1‑250 (MQ=255) cTCACCCAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGc > 1:368212/1‑251 (MQ=255) cACCAAGAATACGGTTGTTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTGACTGACTGCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGcc < 1:428019/250‑1 (MQ=255) aaGAATACGGTTGGTATTACTCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCAc < 1:438956/251‑1 (MQ=255) aTACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAg < 2:273490/179‑1 (MQ=255) aTACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAg > 1:273490/1‑179 (MQ=255) aTTACGCAAGAATTCAATCGCGTCAATATGCTCGCACCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCAACGACGCGCA‑GCGCATAAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCTGATCGCTGTGtt < 2:75056/251‑1 (MQ=255) cGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTAGGGATCCACTCCCCCTCTTTACGACTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGAAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCAt > 1:417490/1‑250 (MQ=255) cGCAAGAATACAATCGCTTCAAGATTCTCGAGCCCGCCAAACTCGTTAGGGATCCACTACCCCTCTTTAAGGCTGTAGTCGAGATAAATCATTGACGCCCCCGAATCGACGCGCA‑GCGCATCCATACCAACACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATCGTTGTAGATCTGCGTGTTCAAGTCCTGATGATAGCCTTCACGCGGATCACTGTGTTCAt > 2:405511/1‑250 (MQ=255) cAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACa < 1:275061/251‑1 (MQ=255) aagaatcaaaTCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACa > 1:126614/9‑250 (MQ=255) ttCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTCCTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCg > 1:297456/1‑251 (MQ=255) aaTCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGCCGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCAAGCGGATCGCTGTGGTCATACAAGATCGTGc > 2:273609/1‑251 (MQ=255) cAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATCGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAAt > 1:267959/1‑251 (MQ=255) ttCTCGCGCCCGCCAAATTCGATCGGGATCCATTCCACCCCTTTCCGGCAGTAGTCGAGATAAATCATTAACGCCACCGCATCGACGCGCA‑GCGCAACAATACCAAAACGTGAAACCCAGTAACGCGCGTTACCGACGAGGAAGTTACTGAATTCACGGCGACAATAGATGTAGATCAGCGTGTTCCAGTCCAGATGATAGCCTTCACGCGGATCGCTGTGTTCATACACGTTCGTGCCATCAAATTCgg > 1:446503/1‑250 (MQ=255) ctcGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCa > 1:112131/1‑250 (MQ=255) cgcgCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCGGTGTTCATACAGGTTCGTGCCATCAAATTCGGCAAgc < 2:286920/251‑1 (MQ=255) gcgcCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAgcg > 1:43987/1‑251 (MQ=255) cgcccgccAAATTCGTTCGGGATCCACTCCCCATCTTTACGGCTCTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACAAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATCCGGCAAgcgc > 1:429883/1‑251 (MQ=255) cgccAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCaa > 1:414840/1‑249 (MQ=255) caacttcgttcgGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCGAAGtca < 1:119021/247‑1 (MQ=255) cgttcgGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACACGAA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTc > 1:271841/1‑251 (MQ=255) ttcgGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCCTAGACGCGCA‑GCGCATCACTACCAAACCGTGCAATCCAGTAACGCGCGTTACCGACGAGGAAGTTACTGAATTCACGGCGAACATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCgg > 2:59313/1‑251 (MQ=255) cgGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCggg > 1:317384/1‑250 (MQ=255) aCTCCCCTTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGAAGCGAA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGCTAGCCTTCACGCGGGTCGCTGCGTTCATACAAGTTCGTGCCATCAAATTCGGCCAGCGCAACGTAATCAGGCGGGACGTGGCCt > 2:129296/1‑251 (MQ=255) aCTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCACTACCAAAACGTGAAATCCAGTAAAGCTCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCt > 1:231424/1‑251 (MQ=255) cccccTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTg < 1:57119/249‑1 (MQ=255) ccTCTTTACGGCTGTAGTCTCGATAAATCATTGTCGCCTCCGCATCGACTCGCA‑GCTCATCAATACCAAAACGGGCAATCCAGTAAAGCGCTTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCATCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCAGCATATGCTGCAAGGGCAAAGTCATCAGTCGGGAAGTGGCCTGGCAcc < 1:374501/251‑1 (MQ=255) tctTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCAccc > 1:18482/1‑250 (MQ=255) ttACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAATGCGCGTTACCGACGAGGAAGTTACTGACTTCTCGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAAGTCGGCAAGCGCAAAGTCAGCAGTCGGGAAGTGGCCTGGCACCCAg < 1:453640/249‑1 (MQ=255) gCTGTAGTCGCGATAAATCATTGACGCCACCGCATAGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCATGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACACAGTCgaga > 1:153184/1‑250 (MQ=255) ttGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAAt > 2:237371/2‑251 (MQ=255) gTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGGGGCCTGGCACCCAGTCGAGAATc < 2:414840/250‑1 (MQ=255) gcgATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTc > 1:299186/1‑250 (MQ=255) actGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGACATCAGTCGGGAAGTGGCCTGGCACCACGTCGAGAATCACGTTCAGACCAGCTGc > 2:329617/3‑251 (MQ=255) aTTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGc > 1:69401/1‑251 (MQ=255) tGACGCCACCTCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTGACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCTAGAATCACGTTCAGACCAGCTGCg < 2:165013/250‑1 (MQ=255) gACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCgt < 2:448137/250‑1 (MQ=255) gCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCCATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGACGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGc > 1:342244/1‑251 (MQ=255) cccACCTCATCGACGCGCA‑GCGCATCAAGTCCAAAACGTGCAATCCATTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTTTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGTAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGTTGCTTGTGc < 2:439376/250‑1 (MQ=255) ccACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCg < 1:66071/251‑1 (MQ=255) cACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCgg > 1:397451/1‑251 (MQ=255) gCATCGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCGGCATc > 1:172983/1‑251 (MQ=255) acGACGCGCA‑GCGCATCAATACCAAAACGTTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCTCGTTCAGACCAGCTGCGTGTGCGGCATCAAt < 1:412418/250‑1 (MQ=255) cGACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACTCGGATCGCTTTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCGGCATCAAt < 1:243530/250‑1 (MQ=255) gACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTCAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCGGCATCAATg > 1:263080/1‑250 (MQ=255) gACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCGGCATCAATg > 1:354365/1‑250 (MQ=255) gACGCGCA‑GCGCATCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGGCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTTTGCGGCATCAATGa < 1:348062/251‑1 (MQ=255) cgca‑gcgcaTCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCGGCATCAATGAAATa < 1:131032/251‑1 (MQ=255) aTCAATACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCAGAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCGGCATCAATGAAATAACGGAAgt < 2:84123/251‑1 (MQ=255) aaaTACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACGGACTTCACGGCGACCATAGTTGTAGATCATCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGGTCATACAAGTGCGTGCCATCAAAGTCGGCAAGCGCAAAGTCAGCAGTCGGGAAGTGGCCTGGCACCGAGTCGAGAATCACGTTCAGACCAGCTGCGTGGGCGGCATCAATTAAATATCTGAAgtc < 2:132854/249‑1 (MQ=255) aaaaCCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACAGACTTCACGGCGACCATAGTTGTAGATCGGCGAGTTCCAGTCCTGACGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGACGTGGCCTGGCACCAAGTCGAGAATAACGTTCAGACCAGCTGCGGGTGCGGCATCAATGAAATAACGGAAgacgt > 2:354695/4‑251 (MQ=255) aaTACCAAAACGTGCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCGGCATCAATGAAATAACGGAAgtcgt > 1:306983/1‑251 (MQ=255) aaaaCGTACAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGTCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCGGCATCAATGAAATAACGGAAGTCGTcgcg > 1:162822/1‑249 (MQ=255) | AGACCGCCCATATCCTGCGGACGAGAAACGCCAGGGAAATCGGTAGACTCCTCAGCCATTGTCACCGCACCGGAAACCTGCTCACCAAGAATACGGTTGGTATTACGCAAGAATTCAATCGCTTCAAGATTCTCGCGCCCGCCAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCA‑GCGCATCAATACCAAAACGTTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTCACGCGGATCGCTGTGTTCATACAAGTTCGTGCCATCAAATTCGGCAAGCGCAAAGTCATCAGTCGGGAAGTGGCCTGGCACCCAGTCGAGAATCACGTTCAGACCAGCTGCGTGTGCGGCATCAATGAAATAACGGAAGTCGTCGCG > NC_000913/3572079‑3572560 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |