| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,555,759 | A→T | Q892L (CAA→CTA) | malT → | DNA‑binding transcriptional activator MalT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,555,759 | 0 | A | T | 98.0% | 150.5 / NA | 49 | Q892L (CAA→CTA) | malT | DNA‑binding transcriptional activator MalT |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (24/24); minor base G (0/1); total (24/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTCGCCCATTTCGATGAGAATTTCGTTGAACGTCTGCTAAATCATCCTGAAGTACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCTTACATCTCTGCATCA‑TTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCAAGAA‑A‑CGCTCCACCACCGCGATATTGGTCAGCAGATGGCATGAGGGATGGGCGACCGTAAATTCCCCCGCGCCCGCCAGCGCCATCGGTAGCACCAGTTGGTCAGCAA > NC_000913/3555512‑3555999 | ttCGCCCATTTCGATGAGAATTTCGTTGAACGTCTGCTAAATCATCCTGAAGTACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTAtt > 2:22845/1‑251 (MQ=255) cccATGTCGATGAGAATTTCGTTGAACGTCTGCGAAATCATCCTGAAGTACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAAGGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATAGCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACCCGCCCAGCTATTGCTg < 1:421076/251‑1 (MQ=255) tGAGAATTTCACTGAACGTCTGCTACATCATCCTGAAGTACCTGAACTGATCCGCACCCGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATgg > 2:280933/1‑251 (MQ=255) gagaATTTCGTTGAACGTCTGCTAAATCATCCTGAAGTACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATggg < 1:433986/251‑1 (MQ=255) cGTTGAACGTCTGCTAAATCATCCTGAAGTACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCg < 2:6261/251‑1 (MQ=255) tGAACGTCTGCTAAATCATCCTGAAGTACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCgtgg > 1:438769/1‑250 (MQ=255) gAACGTCTGCTAAATCATCCTGAAGTACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCgtgt < 1:233349/250‑1 (MQ=255) cGTCTGCTAAATCATCCTGAAGTACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCAGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGGGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTAGTGCTGAAGATGATGGGGTACGGCGGGTAAGt < 2:408214/251‑1 (MQ=255) cTGCTCAATCATCCTGAAGTACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGCACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTCCAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTCAGtttt > 2:385355/1‑250 (MQ=255) cTAAATCATCCTGAAGTACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAAGTTAGcc > 1:71839/1‑251 (MQ=255) tAAATCATCCTGAAGTCCCTGAACTGATCCGCACCAGCCCGCTGACGCAACGAGAATGGCCGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGACATGGAAGTCGCGGCAACCACCATCAAAACGCAAATCCGCAATCTGAATCAAAAACCCGGCGTGGCCCATCGCCAGGATGCTGTACAACACGCACAGCTCTTGCTGAATAGGAGAGGGTACGGCggataaagttacccg > 2:16842/1‑237 (MQ=255) ccggAAGTACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGAATAAcg < 1:116150/247‑1 (MQ=255) ccTGAAGTACCTTAACTGAGCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCGGCTATTGCTGAAGATTATGGGGTACGGCGTGTAAGTTTAGCCGGATAAcgc < 2:285996/251‑1 (MQ=255) ccTGAAGTACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAAcgc < 1:393248/251‑1 (MQ=255) tACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCAACATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTAAAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGAAAGGTTAACCGGCTAAccccccagg > 2:161975/1‑242 (MQ=255) aaCTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGTAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGGAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCt < 1:395010/251‑1 (MQ=255) actgagccggcccAGCCCGCTGACGCAACGTGAATGGCATGTACTGGGGCGGATCGACTCTGGTTACAGCAATGAGCAAATTGCCGGAGATTTGGAAGTCGGGGCAACCACCATCAAAACGCATATTCGCAATCTGTTTCAGAAACTCGGCGTGGCCCATCTCCAGGATGCGGTACAACGCGTTCTTCTATTGCTGAAGATGATGTGGTGCGGCTTGTAAGTGTATCCGGATAACGCGC‑CAGATCCGGCtt < 2:23732/240‑1 (MQ=255) gATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAACAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCTTa < 2:24774/249‑1 (MQ=255) aCCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACAATCAAAACGCATATCCGCAATCTTTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACAGCGTGAAAATTTATCCAGATCAAGCGC‑CAGATCCCGCttcactctctgg > 2:378377/1‑241 (MQ=255) gCTGACGCAACGTGAATGTCAGGTACGGGGGCTTATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGTATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACTCGC‑CAGATCCGGCTTACATCTCTGCATCA‑TTCa < 2:422303/251‑1 (MQ=255) aCGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGTGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGGAAACGCCC‑CCGATTCGGCTTAAATTCCTGCATCA‑TTCCATGc > 1:236164/1‑251 (MQ=255) aCGCAACGGGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAGCTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACGCGGCGTGGCCCAGCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGAGGGTGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCTGACATCTCTGCATTG‑TTCAATGc < 2:428549/251‑1 (MQ=255) gTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGGTAACGCGC‑CAGATCCGGCTTACATCTCTGCATCA‑TTCAATGCTCAcccc > 1:78791/1‑250 (MQ=255) ggTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCTTACATCTCTGCATCA‑TTCAATGCTCACCCGCGTTACGCCa < 2:324979/251‑1 (MQ=255) tGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTCCAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGGTAAAGCGC‑CCGATCCGGCTTACATCTCTGCATCA‑TTCAATACTCACCCGCGATACGGCATATGTTTCTAt > 2:81856/1‑251 (MQ=255) tACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGGTAGGTTAAACGGATAACGCTC‑CAGGACCGGCTTACCTCTCTGCATCA‑TTCCAAGCTCAACCGCGTTACGACAACCGTTTCTAACaacataaaacacc > 1:174420/1‑240 (MQ=255) aTGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCACATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAAAGCGC‑CAGATCCCGCTTACATCTCTGCATCA‑TTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCa > 1:415276/1‑250 (MQ=255) gAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCTTACATCTCTGCATCA‑TTCAATGCTAACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCAAg < 1:240439/250‑1 (MQ=255) cGGAGAACTGGAAGTCGCGGCAACCACCATCAAAAAGCATATCCGAAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGGTTAGCCGGATAACGCGC‑CAGATCCGGATTACATCTCTGCATCAATCCAAT‑CTCACCCCCGATACGCCATACGTTATTATCACACTAAACCGCACCGGCAAGAA‑A‑AGCTccacc > 1:65597/1‑251 (MQ=255) agaACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCTTACATCTCTGCATCA‑TTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCAAGAA‑A‑CGCTCCtccacc < 2:307453/251‑1 (MQ=255) cTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTTGCCGGGTAACGCGC‑CAGATCCGGCTTACATCTCTGCATCA‑TTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCCAAATAAACCGCCCCGGCAAGAA‑A‑AGCTCCCCCACcgcg > 1:26626/1‑250 (MQ=255) aaGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAATCTCGGCGTGGCCCAGCGCCAGGAGGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCTTACATCTCTGCATCA‑TTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTATACCGCTCCGGCAAGAA‑A‑CGCTCCACCACCGCGATAtt < 2:374038/251‑1 (MQ=255) aaGTCGCGGCAACCAACATCAAAACGCATATCCGCAATCTGTATCAGAGACTCGGCGTGGCCCAACGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCTTTCATCTCTGCCTCC‑TTCCATGCTCACCCGCGCTCCGACATCTGTTTCTTTCAAACTATACCGACCCGGCAAAAA‑A‑CACTCcaccacagccagatt > 1:417228/1‑242 (MQ=255) cgcgGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAACCTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCTTACATTTCTGCATCA‑GTCAATGCTCGCCCGCTTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCAAGAA‑A‑CGCTCGACCTCCGCGATTTTGGt < 2:29939/250‑1 (MQ=255) gcgGCAACCACCATCAAAACGCATATCCGCAATCGTTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCTTACATCTCTGCATCA‑TTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCAAGAA‑A‑CGCTCCACCACCGCGATATTGGTca < 2:58904/251‑1 (MQ=255) caccaTCAAAACGCATATCCGCAGTCTGTATAAGAAACTCGGCGAGGCCCATCGCAAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAACCGGGTAACGCGC‑CAGATCCGGCTTACATATATCCACCA‑TTCAATGCTAACCCGCGTTACGCCATCTGTTTATATCAAACCAAACCGCACCGGCCAGAACA‑C‑CACCACCACCGCGATATTGGTCAGCAGATgg > 1:419876/1‑251 (MQ=255) aaCGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCCTCGCCAGGCTGCGGTAAAACCCGCCAAGATCTTGCTGAAGCTGATGGGGTACGGCGTGTAAGTTTAACCGGATAACGCGC‑AAGATCCGGCTTACATCTCTGCGTAA‑TTCAACGCTCACCCACGTTACGCCATCAGTTTATATCACACCAAACCGCACCACAAAGAA‑A‑CCCCCCCACACCACGACATTCGTCAGCAAATGGCactggggg > 2:421166/1‑244 (MQ=255) aCGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCTTACATCTCTGCATCA‑TTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCAAGAA‑A‑CGCTCCACCGCCGCGATATTGGTCATCAGATGGCATGAGGGAt < 2:53100/251‑1 (MQ=255) tCCGCAATCGGTATCAGAAACGCGGCTTGGCCCATCGCCAGGAGGCGGTACAACTCGCCCGGCGATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGTATAACGCGC‑CAGATCCGGCTTACATCTCTGCATCA‑TTCAATGCTCACCCGCGTTACGCCATCGGTTTCTATCAAACTAAACCGCGCCGGCAAGAA‑A‑CGCTCCACCACCGCGATATGGGTCAGCGGATGGCATGAGGGATGGGCGa < 2:369750/250‑1 (MQ=255) ccGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCTTACATCTCTGCATCA‑TTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCAAGAA‑A‑CGCTCCACCACCGCGATATTGGTCAGCAGATGGCATGAGGGATGGGCGAcc < 1:80250/251‑1 (MQ=255) aaTCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCTTACATCTCTGCATCA‑TTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCAAGAA‑A‑CGCTCCACCACCGCGATATTGGTCAGCAGATGGCATGAGGGATGGGCGACCGTa > 1:453884/1‑250 (MQ=255) tGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGG‑CAGATACGGCTTACATCTCTGGATCA‑TTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCCAGAA‑A‑CGCCCCACCACCCCCATATTTGTCAGCAGATGGCATGAAGGCTGGGGGACCGGAAAttt > 2:10338/1‑250 (MQ=255) tATCAGAAACTCGGCGTGGCCCATCGCCGGGATGCGGTTCAACACGCCCAGCTATTGCGGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCTTACATCTCTGCATCA‑TTCAATGCTCACCcg < 1:444562/144‑1 (MQ=255) gTGGCCCATCGCCAGGATGCGGTACAACACGACCAGCTATTGCTGAAGATGATGGTGTACGGCGTGTAAGTTTAGCCGGATAACGCGCGCA‑ATACGGCTTACCTCTCGGGAACA‑TTCAACGCTCACCCGCGGTACGCCATCTGGTTCTATCAAACTAAACCGCACCGGCAAGAA‑AACG‑TCCACCACCGCGCTATTGGTAAGCAGAAGATAGGGGGGAAGGGCGACCGAAAATTccccccggcccaccaggg > 1:145798/1‑238 (MQ=255) ccATCGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCTTACATCTCTGCATCA‑TTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCAAGAA‑A‑CGCTCCACCACCGCGATATTGGTCAGCAGATGGCATGAGGTATGGGCGACCGTAAATTCCCCCGCGCCCGCCAGCGCCATc < 1:252637/251‑1 (MQ=255) cGCCAGGATGCGGTACAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAAAGCGC‑CAGATCCGGCTTAAATCTCTGCATCA‑TTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCAAGAA‑A‑CGCTCCACCACCGCGATATTGGTCAGCAGATGGCATGAGGGATGGGCGACCGTAAATTCCCCCGCGCCCGCCAGCGCCATCggg > 1:14718/1‑249 (MQ=255) aGGATGCGGTACAACACGCCCAGATATTGCTGAAGATGATGGGGGACGGCGTGTCAGATTAGCCGGAAAACGCGC‑CGGATCCGGCTTACAGCTAGGCATCA‑TTCAAAACTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCAAGCA‑A‑CGCTCCACCACCGCGATATTTGTCAGCAGGTGGCATGAGGGATGGGCGACCGTAAATTTCCCCGCCCCCGCCAGCGCCATCCATAGCAc > 2:122618/1‑251 (MQ=255) tGCGGTTCAACACGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGGATACATATATGCATCA‑TTCAATGCTCACCCGCGGTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCAAGAA‑A‑CGCTCCACCACCGCGATATTGGTCAGCAGATGGAATGAGGGATGGGCGACCGTAAATTCACCCGCGCCCGCCAGCGCCATCGGAAGCACCAGt > 1:117440/1‑251 (MQ=255) cacGCCCAGCTATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCTTACATCTCTGCATCA‑TTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCAAGAA‑A‑CGCTCCACCACCGCGATATTGGTCAGCAGATGGCATGAGGGATGGGCGACCGTAAATGCCCCCGCGCCCGCCAGCGCCATCGGTAGCACCAGTTGGTCAGCaa < 1:447870/251‑1 (MQ=255) | TTCGCCCATTTCGATGAGAATTTCGTTGAACGTCTGCTAAATCATCCTGAAGTACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGC‑CAGATCCGGCTTACATCTCTGCATCA‑TTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCAAGAA‑A‑CGCTCCACCACCGCGATATTGGTCAGCAGATGGCATGAGGGATGGGCGACCGTAAATTCCCCCGCGCCCGCCAGCGCCATCGGTAGCACCAGTTGGTCAGCAA > NC_000913/3555512‑3555999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |