| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,681,500 | G→A | P416S (CCT→TCT) | yphG ← | DUF5107 domain‑containing protein YphG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,681,500 | 0 | G | A | 98.2% | 180.6 / NA | 56 | P416S (CCT→TCT) | yphG | DUF5107 domain‑containing protein YphG |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (23/32); minor base C (1/0); total (24/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
TACAGCGATAATCCAGCGGGTCCAGCGCCACGCCGCGCAGGTAGTAATCGAACGGTGAACGGCTGGCGTGATGATATTGCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGGATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGTTTTATCACCGCATCGCGGGAGGCATTTTGCACCATGCCCAAAGAATGATAAGGCAGGAAATACTGCTCAAAACGCTT > NC_000913/2681254‑2681743 | tACAGCGATAATCCAGCGGGTCCAGCGCCACGCCGCGCAGGTAGTAATCGAACGGTGAACGGCTGGCGTGATGATATTGCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGCCGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTg > 1:169787/1‑251 (MQ=255) gCGATAATCCAGCGGGTCCAGCGCCACGCCGCGCAGGTAGTAATCGAACGGTGAACGGCTGGCGTGATGATATTGCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGCGAGCTCAATGGTCAGCCTTTCAGAATTGATAc > 2:317766/1‑251 (MQ=255) aTCCAGCGGGTCCAGCGCCACGCCGCGCAGGTAGTAATCGAACGGTGAACGGCTGGCGTGATGATATTGCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGCTGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCCATGGTCAGCCTTTCAGAATTGATACCGTGc > 2:398715/1‑250 (MQ=255) ggTCCAGCGCCACGCCGCGCAGGTAGTAATCGAACGGTGAACGGCTGGCGTGATGATATTGCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGccc > 1:409584/1‑251 (MQ=255) cAGCGCCACGCCGCGCAGGTAGTAATCGAACGGTGAACGGCTGGCGAGATGATATTGCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTgg > 1:183340/1‑250 (MQ=255) gcgcCACGCCGCGCAGGTAGTAATCGAACGGTGAACGGCTGGCGTGATGATATTGCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATg < 1:42224/251‑1 (MQ=255) gccgcGCAGGTAGTAATCGAACGGTGAACGGCTGGCGTGATGATATTGCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCg < 1:214021/251‑1 (MQ=255) gagcAGGGAGGAATCGAACGGTGAACGGCTGGCGTGATGATATTGCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGTCGTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAAAGCTTGCGGCTGATGTGCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTAAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAg < 2:126809/249‑1 (MQ=255) agtaATCGAACGGTGAACGGCTGGCGTGATGATATTGCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCTGCCTGTCAGAATTGATTCCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGt < 1:221004/251‑1 (MQ=255) gAACGGTGAACGGCTGGCGTGATGATATTGCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATCCCGTGCACCACACCCTGGATGGCGGTCGCAGGCATCCGTGCCACgg > 1:232115/1‑251 (MQ=255) taaCGGCTGGCGTGATGATATTGCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGcatcat < 2:345451/249‑1 (MQ=255) aCGGCTGGCGTGATGAGATTGCGCCAGATGCTGACCGATAAACCAGGCTTCAGCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGGTTGCGGCTGATGTTCCTTATAACTCAGTACAATATTGCCGGCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGAGGGCGGTCGCAGGCATCAGTGCCACGGCATCATCaa < 2:161729/251‑1 (MQ=255) tGGCGTGATGATATTGCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGACCTGGAAATGTCTTGTGCTGCCAGTGGCGCCTTGGCGACGTCCGGAAACGGCAAAGCTTGCGGCTGATGATCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACCCGCCCTGGATGGCGGTCGCCGGCCTCAGTGCCACGACATCATCACGTAAc > 1:310194/1‑251 (MQ=255) gatATTGCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGCCGCAGGCATCAGAGCCACGGCATCATCCAGTAACGCG‑TGGCAt > 2:191632/1‑251 (MQ=255) gatATTGCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGACTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCA‑TTGCAt > 1:209185/1‑251 (MQ=255) atatGGCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCAGCAGTGCCACGGCATCATCAAGTAGCGCG‑TTGCAtt < 2:290432/251‑1 (MQ=255) gCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCg < 1:85717/251‑1 (MQ=255) tcaaggtGCTGACCGATAAACCCGGCCTCATCTGAGCTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACATCCGATAACGCCAACGCTTGCGGCTGGTGTTCCTGATACCTCCGTACAAAATTGCCGTCGGCATCGGAGAGCGCAATGGTCCGCCTTTTAGCAATGATCACGATCACCACGCCCAGGATGCCGGTCGCAGTCATCCTTCCCACGCCATCATCGAGTCACGCG‑CTGCATTTACCGAt > 2:288802/7‑251 (MQ=255) aGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTc < 1:382793/251‑1 (MQ=255) aGATGCTGACCGAGAACCCAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTTGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTc < 2:158335/251‑1 (MQ=255) ccAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCAGCAAGTAACGCT‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGt < 1:199018/251‑1 (MQ=255) ggCTTCTTCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATc > 1:118839/1‑251 (MQ=255) ccacttGTACTGGATATGTCTTGGGCTGCTAGTGTCGCGTTGGCGACGTCCGGTAACTGCAACGCTTGCGGCTGATTTTCCTGATAACTCATTACAATATTGCCGCCTGCATCGGTGAGCTCAATTGTCAGCCTATCAGACTTGATACCGTGCAACCCGCCGTGGATGGCGGTCGCAGGCATCAGTGCCACGGCAGCATCAAGTAACGCG‑TTGCATGGACCGATTTCGCGGAACGCCAGGCGGAATCCga < 2:71369/245‑2 (MQ=255) gTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGTATCGCCAGGCGGTATCCGTTCaa < 1:330903/248‑1 (MQ=255) cTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACgg > 1:2698/1‑248 (MQ=255) tAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGCTAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCCGGCGGTATCCGTTCAACGGAGAGATg > 2:196970/1‑251 (MQ=255) gTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCAt > 1:256044/1‑251 (MQ=255) ggCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCAGCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAAt < 1:345193/251‑1 (MQ=255) cGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTta < 1:28883/251‑1 (MQ=255) gACGTCTGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTtac > 1:127478/1‑251 (MQ=255) aCGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATACGTTCAACGGAGAGCTGGCATACAGCCCCCACTCAATCCCCCGCTtact > 2:375967/1‑251 (MQ=255) ggTAACGGAAACGCTTGCGGCGGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTACAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTATCGCG‑TTGCATTTACCGATTGCGCGGCTCGCCAGGCGGTATCCGTTCAACGTAGGGATGGCATACAGCCCCCACACAAGCCCCCGCTTACTACGCTg < 2:101882/251‑1 (MQ=255) aaCGGCATCGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATGCCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAg < 1:284143/251‑1 (MQ=255) ggCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGttt < 1:449877/251‑1 (MQ=255) tGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGGTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGTTTTATCAcc < 1:453735/249‑1 (MQ=255) gCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGTTCAATGGGCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCTGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTGCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCTCTCAAGCCCGCGCTTACTACGCTGGAGTTTTATCACCGCATcg < 2:183340/251‑1 (MQ=255) gATGTTCCTGATAACTCAGGACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCTATTTCGCGGATCGCCAGGAGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGTTTTATCACCGCATCGCgg < 2:132993/251‑1 (MQ=255) aTGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGTTTTATCACCGCATCGCggg > 1:242118/1‑251 (MQ=255) gTTCCTGATAACTCAGTACAATAGTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATTGCATACAGCCCCCACTCAATCCCCCGCTTTCTACGCTGGAGTTTTATCACCGCATCGCGGGAg < 2:285462/251‑1 (MQ=255) ttCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGTTTTATCACCGCATCGCGGGAgg > 1:263010/1‑251 (MQ=255) gATATCTCAGGAAAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCTTTTCAGAATTGATACCGTGCATCACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCGAGGCTGTATTCGTTCAAGGGGGAGATGGCATACAGCTCCCACTCAATCCCCCGCTTACTGCGCTGGAGGTTTATCACCGCATCGTGGGAGGCAt < 2:438272/249‑1 (MQ=255) aTAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGTCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAAGCCCGCGCTTACGACGCTGGAGTTTTATCACCGCATCGCGGGAGGCAtttt < 1:362958/251‑1 (MQ=255) aGTACAATATTGCCGTCGGCATCGGAGAGCTCACTGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGTTTTATCACCGCATCGCGGGAGGCATTTTGCACCAt > 2:215357/1‑251 (MQ=255) aGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCT‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTAGCCGGTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCTCTTACTACGCTGGAGTTTTATCACCGCATCGCGGGAGGCATTTTGCACCAt < 1:278012/251‑1 (MQ=255) ggaCAATATTGCCGGCGGCATCGGAGAGCTCAACGGTCAGCCGTTCAGAATTGATTCCGTGCAACACGCCCTGGATGGTGGTCGCAGGCTTCAGTGCCACGGCATCATCAAGTAACGCGGTTG‑AGTTACTGATTTCGCGGATCGTCAGCCGGTATCCGTTCAACGGTGAGAGGGCATACAGCCCCCTCTCAATCCTCCGCTTACTCCGCTGTAGTTTGATCACCGCATCGCGGGACGCATTTGGCTCCATg < 2:116696/249‑1 (MQ=255) gTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGTTTTATCACCGCATCGCGGGAGGCATTTTGCACCATg > 2:60161/1‑251 (MQ=255) tACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGTTTTATCACCGCATCGCGGGAGGCATTTTGCACCATGc > 1:178731/1‑251 (MQ=255) atattaacgacgggaTCGGCGAGCTCAATGGTCAGCCTTTCAAAATTGATACCGCGCAAACCGCCCTGGGTGGCGGTCGCAGGAAGCAGTGCCACGGCATCATCCAGTAACGCG‑TTGCATTTACCGATTTCGCGGAGCGCCAGGCGGTATCCGTTCAACGGAGCGATGGCATACAGCCCCCACTCAATCCCCCGCATACTACGCCGGAGTTTTATCACCGCATCGCGGGCGCCATTTTCCACCATGCCCa > 2:292894/15‑250 (MQ=255) gCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGTTTTATCACCGCATCGCGGGAGGCATTTTGCACCATGCCCAAAGAAt < 1:417461/251‑1 (MQ=255) cGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGTTTTATCACCGCATCGCGGGAGGCATTTTGCACCATGCCCAAAGAATGa < 1:398715/251‑1 (MQ=255) cGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGTTTTATCACCGCATCGCGGGAGGCATTTTGCACCATGCCCAAAGAATGa < 1:196970/251‑1 (MQ=255) cGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGTTTTATCACCGCATCGCGGGAGGCATTTTGCACCATGCCCAAAGAATGATa < 1:406259/250‑1 (MQ=255) agCTCAATGGTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGTTTTATCACCGCATCGCGGGAGGCATTTTGCACCATGCCCAAAGAATGATAAGGCAGGAAAt > 2:56175/1‑250 (MQ=255) gTCAGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGTTTTATCACCGCATCGCGGGAGGCATTTTGCACCATGCCCAAAGAATGATAAGGCAGGAAATACTGCTCaaa < 1:188736/251‑1 (MQ=255) aGCCTTTCAGAATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGTTTTATCACCGCATCGCGGGAGGCATTTTGCACCATGCCCAAAGAATGATAAGGCAGGAAATACTGCTCAAAACg < 1:4015/251‑1 (MQ=255) cTTTCAGAATAGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAGGTAACGCG‑TTGCATTTACCGATTTCGCGGAACGCCAGGCGGTATCCGTTCAACGGAAAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGATTTATCACCGCATCGCGGGAGGCATTTTGCACCATGCCCAAAGAATGGTAAGGCACGAAATACTGCTCAAAACGCtt > 2:142818/1‑251 (MQ=255) | TACAGCGATAATCCAGCGGGTCCAGCGCCACGCCGCGCAGGTAGTAATCGAACGGTGAACGGCTGGCGTGATGATATTGCTCCAGATGCTGACCGATAAACCAGGCTTCATCTGTACTGGTAATGTCTTGTGCTGCCAGTGGCGCTTTGGCGACGTCCGGTAACGGCAACGCTTGCGGCTGATGTTCCTGATAACTCAGTACAATATTGCCGTCGGCATCGGAGAGCTCAATGGTCAGCCTTTCAGGATTGATACCGTGCAACACGCCCTGGATGGCGGTCGCAGGCATCAGTGCCACGGCATCATCAAGTAACGCG‑TTGCATTTACCGATTTCGCGGATCGCCAGGCGGTATCCGTTCAACGGAGAGATGGCATACAGCCCCCACTCAATCCCCCGCTTACTACGCTGGAGTTTTATCACCGCATCGCGGGAGGCATTTTGCACCATGCCCAAAGAATGATAAGGCAGGAAATACTGCTCAAAACGCTT > NC_000913/2681254‑2681743 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |