Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 2,032,423 | G→A | V219V (GTC→GTT) | yedJ ← | putative HD superfamily phosphohydrolase YedJ |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,032,423 | 0 | G | A | 97.1% | 99.5 / NA | 35 | V219V (GTC→GTT) | yedJ | putative HD superfamily phosphohydrolase YedJ |
Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (17/17); minor base C (1/0); total (18/17) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 |
GCTCCAGTGATTCTCACCTACACCATTAAGCTGCGCCACCAACGTTTTAACATCATAAATTTGCAGCAGTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGACACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGTAGCTTCAGC‑AACTTAGTCTGGAAATGATCCAGCGCGTAGCGTTTATCATCAAGCGGGCGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGC > NC_000913/2032180‑2032656 | gcTCCAGTGATTCTCACCTACACCATTAAGCTGCGCCACCAACGTTTTAACATCATAAATTTGCAGCAGTTGCTCCAGCATTGCCTGTTCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATAGAGTTTCCTGCATAGATTTCACCGGCCATCGGAGATGGCCGACAGGTTAACATAATTACAGCCATTT‑AGGGCCACGCGCGCAGCCATTGGATTAAAACGCATCTATCACCTTGTGATCAACACCtt < 1:288620/251‑1 (MQ=255) cACCTACACCATTAAGCTGCGCCACCAACGTTTTAACATCATAAATTTGCAGCAGTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCCACACCTTCATTCTCCCCCGcc > 2:179973/1‑251 (MQ=255) aCCTACACCATTAAGCTGCGCCACCAACGTTTTAACATCATAAATTTGCAGCAGTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCAACACCTTCATTCTCCCCCGCCa < 1:76092/251‑1 (MQ=255) cacCATTCAGCTGCGCCACCAACGTTTTAACATCCTAAATTTGCAGCAGTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTT‑AGGGCCACGCGCTCCGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCAACACCTTCATTCTCCCCCGCCAGTTCg > 2:63846/1‑251 (MQ=255) tAACATCATAAATTTGCAGCAGTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCAACACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACt > 2:377983/1‑251 (MQ=255) tcatAAATTTGCAGCAGTTTCTCCAGCATCGCTTGTGCGGCATTCACGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTT‑AGGGCCACGAGCTCAGCCAGCGGCTGCAAAAGCATCTATCACCTTGTGATCAACACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTAGAATaaaa > 2:203018/1‑250 (MQ=255) aaaTTTGCAGCAGTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCAACACCTTCATCCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATg < 1:58022/250‑1 (MQ=255) aaaTTGGCAGCATTTGCTCCAGCATTGCCTGTGCGGCATTCCCGGTGATGTATGAATCGGTTACTGATAAATTTTCCTGCATAGATTCCACCGGCCATCTGAGATGGCCGCCAGGTTAACATAAGTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTAACTCCTGGTGATCAACACCTTCATTCCCCACCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATgc < 2:118117/251‑1 (MQ=255) gcagcaTTTTCCCCAGCTTGGCCTGTGGGGCATTCCCGGTGCTGTATGACTCGTTTACTGATATATTTTCCTTCATAGATTCCCCCGGCCATCTTAGATGGCCCACAGGTTAACATAATTCCAGCCATTT‑AGGGCCCCGCGCTCAGCCAGCGGATGAAAACGCATCTCTCACCTTGTGATCAACACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACGAAAAAATGCGCGtt < 2:402482/250‑1 (MQ=255) tctcCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCAACACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGcc > 1:23321/1‑251 (MQ=255) gtgcggtcttCCCGGTGTTGTATGAATCGGTTACTGATATATTTTCCGTCATAGATTTCACCGGCCAGCGGAGAGTGCCGAAAGGTTAACATAATTACAGCCATTT‑AGGGCCCCGCGCTCAGCCATCGGATGAAAACGCATCTATCACCTTGTGATAAACCCCTTCATTCTCCCCCGCCAGGTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCtt < 2:234474/243‑1 (MQ=255) ccGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCAACACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCAt > 1:195769/1‑251 (MQ=255) gAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCAACACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGt > 1:432196/1‑249 (MQ=255) ggTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCAACACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGTTAGCTTc > 2:382000/1‑250 (MQ=255) ggTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCAACACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGTAGCTTc > 1:335187/1‑250 (MQ=255) tttttCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCCCCTTGTGATCAACCCCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGTAGCTTCAGC‑AACTTAGTc < 1:99268/249‑1 (MQ=255) tCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCAACACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGAGGTATCTTCAGC‑AACTTAGTCTGGa > 2:244318/1‑250 (MQ=255) cTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCCTTT‑AGGGCCACGCGCTCAGCCAGCGGAAGAAACAGCATCTATCACCTTGTGATCAACACCTTCATTCTCACCAGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGTAGCTTCAGC‑AACTTAGTCTGGAAAt > 1:195520/1‑251 (MQ=255) gcaaaGATGTCACCGTCCACCTGAGAGGGCCGAAAGGGTAACATAATTACAGCCATTT‑AGGGCCACGCGCGCAGCCAGCGGATGAAAACGCATCTGTCACCTTGTTACCAACCCCGCAATTCTCCCCCGCCAGTGCGGCACTGAGCTTCGCCATAAACTCGAGTAAAAAATGCGCGTTGTGCTGCTCCAGCGGCGTGCCTTTGGCGGGTTGTATGGTTTGCGTTAGCGTCGGC‑AACTTAGACTCGAAATg < 2:180539/246‑1 (MQ=255) attgaattaaCCGGCCATCTGAGAGAGCCGACAGTATCACATAATTACAGCCATTT‑AGTGCCACACGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCAACACCTTCATTCTCCACAGCCAGTACGGCACTGAGCTTCGCCATCAACTCGCCTCACAAAAGCGCGTTGTGCTGCACATGCTGCTAGCCGCTTGCGATTTGCATGCTATGCCGTCGCTTCAGCGAACT‑AGTCTGGAAATGATc > 2:145419/10‑251 (MQ=255) attgcACCGGCCACTTGAGAGGGCCGACAGGTTAACATAATTCCAGCCATTA‑AGGGCCACCCGCCAAGCCAGCGGAGGAAAACGCATCTATCCCCTGGTGATCAACCCCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGTAGCTTCAGC‑AACTTAGTCTGGAAATGATCCAgc < 2:348521/247‑1 (MQ=255) ccGGCCATCGGAAATGCCCGACAGGTTAACAAAATTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACCCATCTATCACCTTGGGATCAACTCCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCAGGTTTTTCGGTAGCTGCAGC‑AACTTAGTCTGGAAATGATCCAGCGCGTAg < 1:286037/251‑1 (MQ=255) gagaGGGCCGAACGGTTAACATAATTCCAGCCATTT‑AGGGCCACGCGCTCCGCCAGCGGATAAAAACGCATCTCTCCCCTTGTGATCACCACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGTAGCTTCAGC‑AACTTAGTCTGGAAATGATCCAGCGCGTAGCGTTTa < 2:20856/247‑1 (MQ=255) agaTGGCCGACAGGTTAACATAATTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCAACACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGTAGCTTCAGC‑AACTTAGTCTGGAAATGATCCAGCGCGTAGCGTTTatcatc > 1:387858/1‑251 (MQ=255) gagggCCGACAGGTTAACAAAATTACA‑CCATTTTAGGGCCACGCGCTCAGCCCGCTGATGAAAACGCTTCTATCCCCTTGTGACCAACACCTTCATTCCCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGTAGCTTCAGC‑AACTTAGTCTGGAAATGATCCAGCGCGTAGCGTTTAtcatca < 2:90037/248‑1 (MQ=255) ccGACAGGTTAACATAATTACAGCAATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCAACACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGTAGCTTCAGC‑AACTTAGTCTGGAAATGATCCAGCGCGTAGCGTTTATCATCAAGCgg < 1:448378/251‑1 (MQ=255) aGGTTAACATAATTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCCCCTTGTGATCAACACCTTCATTCCCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGTAGCTTCAGC‑AACTTAGTCTGGAAATGATCCAGCGCGTAGCGTTTATCATCAAGCGGGCGAt < 1:377983/251‑1 (MQ=255) aaCATAATTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCAACACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGTAGCTTCAGC‑AACTTAGTCTGGAAATGATCCAGCGCGTAGCGTTTATCATCAAGCGGGCGATGCtgt > 2:74542/1‑251 (MQ=255) cccTCACCCAGCGGATAAACCCGCATCTATCCCCTGGTAACCAACACCTACATTCCCCCCCGCCAGTTCTGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGTAGCTTCAGC‑AACTTAGTCTGGAAATGATCCAGCGCGTAGCGTTTATCATCAAGCGGGCGAGGCTTTGCGAACGGATCTTCACCATCAAACAgcg < 2:180262/249‑1 (MQ=255) cagccagcGGATGAAAACGCATCTATCACCTTGTGATCAACACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGTAGCTTCAGC‑AACTTAGTCTGGAAATGATCCAGCGCGTAGCGTTTATCATCAAGCGGGCGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCAc > 1:12891/1‑251 (MQ=255) agccagcGGAAGAAAACGCATCTTTCCCCTGGTGTTCAACACCTTCATTCTCCCCCGCCAGGTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGTAGCGTCAGC‑AACTTAGTCTGGAAATGATCCAGCGCGTAGCGTTTATCATCAAGCGGGCGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACg < 1:453147/251‑1 (MQ=255) ccagcGGTTGAAAACGCATCTATCACCTTGTGATCAAAACCTTCCATCTACCCAGCAAGTTCGACACTGGGCTTCGCCATCAACTAGACTAACCACTGCGCGTTGTGCTGCGCAAGCTGCTTGCATCTTGCGTTTTGCATGGTTTGCGGTAGCTTCCGC‑AACTTAGTCTGGAAATGGTCCAGCGCGTAGCGTTTATCATCAAGCGGGCGATGCTGTGCGAACTGATCTTCACCATCACACAGCGCAACgac > 2:222547/1‑249 (MQ=255) ggATGAAAACGCATCTATCACCTTGTGATCAACACCTTCATTCTCCCCAGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGTAGCTTCAGC‑AACTTAGTCTGGAAATGATCCAGCGCGTAGCGTTTATCATCAAGCGGGCGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCactg > 2:448521/1‑248 (MQ=255) aaCGCATCTATCACCTGGTGATCAACACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGTAGCTTCAGC‑AGCTTAGTCTGGAAATGATCCAGCGCGTAGCGTTTATCATCAAGCGGGCGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGa < 1:78270/251‑1 (MQ=255) tCTATCACCTTGTGATCAACACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATCCACGTTGTGCTGCGCCAGCTGCTTGCCTCGTGCGGTTTGCATGGTTTGCGGTAGCTTCAGC‑AACTTAGTCTGGAACTGATCCAGCGCGTATCGTTTATCATCAAGCGGGCGATCCTGTGCGAACGGATCTTCACCATCAACCAGCGCCACGCCCAATGCCCCTGCAACGGc > 2:118158/1‑251 (MQ=255) | GCTCCAGTGATTCTCACCTACACCATTAAGCTGCGCCACCAACGTTTTAACATCATAAATTTGCAGCAGTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTT‑AGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGACACCTTCATTCTCCCCCGCCAGTTCGGCACTGAGCTTCGCCATAAACTCGACTAAAAAATGCGCGTTGTGCTGCGCCAGCTGCTTGCCTCTTGCGGTTTGCATGGTTTGCGGTAGCTTCAGC‑AACTTAGTCTGGAAATGATCCAGCGCGTAGCGTTTATCATCAAGCGGGCGATGCTGTGCGAACGGATCTTCACCATCAAACAGCGCCACGCCCAATGCCCCTGAAACGGC > NC_000913/2032180‑2032656 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |