Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,429,069	0	T	A	71.4%	68.7 / 30.9	52	G7G (GGT→GGA)	stfR	putative prophage side tail fiber protein StfR
Reads supporting (aligned to +/- strand):  ref base T (7/7);  new base A (19/16);  total (28/24)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.70e-01
Rejected as consensus: Frequency below/above cutoff threshold.

ACCGGAAGTGATGACGGTCGCCACAGCAACACGTCTCTGGCGTGGGGAGCTGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAACACGCTGGCCTCAGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGACGTTGAGTACGGTCAGTACAGCGTTATTCTGTTGGTGGAAGGATTCCCGCCGTCACATGCCGGGACCATTACCGTGTATGAAGATTCTCAACCCGGTACGCTGAATGATTT  >  NC_000913/1428820‑1429314                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                      aCCGGAAGTGATGACGGTCGCCACAGCAACACGTCTCTGGCGTGGGGAGCTGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGgtg                                                                                                                                                                                                                                                      <  1:451022/251‑1 (MQ=255)  ccGGAATTGATGACGGTCGCCACAGCAACACGTCTCTGGCGTGGGGAGCTGGCGTGCAGTTTAACCCGACCGAATCCGGGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCGGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGGGTGAATTTGGCAGTAAAGATTTCAGgtgt                                                                                                                                                                                                                                                     <  1:136118/251‑1 (MQ=255)                   cGCCACAGCAACACGTCTCTGGCGTGGGGAGCAGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGAGCACTGACGGTTTCATCGTGGGTATCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGACCGCCGGTTCAGGCGGGCTTTTTTGTGGGGTGAATATGGCCGTAAAGATTTCAGGTGTACTGAAAGACGGcac                                                                                                                                                                                                                                      >  1:446729/1‑249 (MQ=255)                                                            gTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCaaaa                                                                                                                                                                                           <  1:68746/251‑1 (MQ=255)                                                                aatccggcagcgtccgtcgttgttGATATTGCTTATGAAGGCTCCGGCAGTGGCTACTGGCGTACTGACGGATTCATCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTATAGAACTGCACAATTCAGCTGAAAGCCAGACGTa                                                                                                                                                                                       <  1:253312/229‑1 (MQ=255)                                                                     ggcagcgtccgtcgttgttGATATTGCTTATGAAGGCTCCGGCAGTGGCGACTGGCGTGCTGACGGATTCATCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGc                                                                                                                                                                                  <  1:232966/234‑1 (MQ=255)                                                                       cagcgtccgtcgttgtggATATTGCTTATGAAGGCTCCGGCAGTGGCTACTGGCGTACTGACGGATTCATCGTTGGGGTCGTTTATAAATTCTGATTAGCCAGGTAACACAGGGTTATGACAGCCCGCCGTAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCCCCATTCAGCTGAAAGCCAGACGTAACAGcac                                                                                                                                                                                <  1:133569/234‑1 (MQ=255)                                                                             ccGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACgg                                                                                                                                                                           <  1:96628/250‑1 (MQ=255)                                                                                      ttGATATTGCTTATGAAGGCTCCGGCAGTGGCGACTGGCGTACTGACGGATTCATCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGATGAAAGCCAGACATAACAGCACCACGGTGGGGGTGa                                                                                                                                                                  >  2:336023/1‑250 (MQ=255)                                                                                        gATATTGCTTATGAAGGCTCCGGCAGTGGCGACTGGCGTACTGACGGATTCATCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAaca                                                                                                                                                               <  1:448775/251‑1 (MQ=255)                                                                                               cTTATGAAGGCTCCGGCAGTGGCGACTGGCGTACTGACGGATTCATCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGGGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGAGGTGGTGAACACGGTggg                                                                                                                                                        >  1:51030/1‑250 (MQ=255)                                                                                                ttATGAGGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGCAATGCCCAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAACAAGCTGGcc                                                                                                                                                       >  2:167829/1‑251 (MQ=255)                                                                                                 tATGAAGGCTCCGGCAGTGGCTACTGGCGTACTGACGGATTCAGCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTggg                                                                                                                                                        <  2:369488/249‑2 (MQ=255)                                                                                                  agtatgtcccgggCAGTGGCGACTGGCGCATTGACGGTTTCTGCGTGGGTTTCGGTTATAAGTTCTGATTTGCCTGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAACACGCTGGCCt                                                                                                                                                      <  2:354781/239‑1 (MQ=255)                                                                                                     aaGGCTCCGGCAGTGGCGACTGGCGTACTGACGGATTCATCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTc                                                                                                                                                     >  2:124966/1‑248 (MQ=255)                                                                                                         ctccGGCAGTGGCGACTGGCGTACTGACGGATTCATCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGAACCACGGTGGTGGTGAACACGGTGGGCTCAGagact                                                                                                                                              >  2:126145/3‑247 (MQ=255)                                                                                                           ccGGCAGTGGCGACTGGCGGACTGACGGATTCATCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTTAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATcc                                                                                                                                            <  1:292426/251‑1 (MQ=255)                                                                                                               cAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGAGTAGCCAGGTAACACAGTTTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCGCCACGGTGGTGGTGAACACGCTGGCCTCAGAAAATCCGGAt                                                                                                                                        <  1:286365/251‑1 (MQ=255)                                                                                                                  tGGCGACTGGCGTACTGACGGATTCATCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGa                                                                                                                                      >  1:114762/1‑250 (MQ=255)                                                                                                                         tGGCGCACTGACGGTTTAATCGTGGGTGCCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGCCAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGGGTACTGAAAGACGGCCCAGGAAAACCGGTACCGAACTGCACAATCCAGCTGAAAGCAAAACGTAAAAACACCACGGTGGGGGTGAACACGCAGGCCTCAGAAAATCCGGATGAAGCAgggg                                                                                                                              >  2:366390/1‑250 (MQ=255)                                                                                                                             gtaCTGACGGCTTCATCGTTGGCGTCGGATATAACTTCTGATTAGCCAGGTAACACAGCGTTATGACAACACGCCGGAACCGGTAGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCATGAAAGACGGAACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACAAGGTGGGCTCAGAGCATCAGGATCAAGCCGGGCGtt                                                                                                                           >  2:48353/3‑250 (MQ=255)                                                                                                                                ttGACGGATTCATCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGGAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGACAGACGGCCCAGGAAAACCGGTACAGAACTGCCCCATTCAGCTGAAAGCAAGACGTAACAGCACCACGGTGGTGGTGAGCACCGGGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACa                                                                                                                        >  2:80997/2‑250 (MQ=255)                                                                                                                                 tGACGGATTCATCGTTGGGGTCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGCGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGc                                                                                                                      >  1:227407/1‑251 (MQ=255)                                                                                                                                              gttggggtCGGTTATAAATTATGATTCGCCAGGCAACACAGTGTTATGACAGCCCGCCGGACCCGGTGGGCTTTTTTGTGGGGTGCATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCACAGAGAATCCGGATGAAGCCGGGCGTTACAACATggctgtggagg                                                                                                         >  2:298073/7‑242 (MQ=255)                                                                                                                                                 ggggtCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTAc                                                                                                       <  1:426892/247‑1 (MQ=255)                                                                                                                                                  tggtctgTTATAAATTCTGATTAGCCAGGTACCATAGTGTTATGACAGCCCGTCGGACCCGGTGGGCTTTGTTGTGGGGTGAATATGGTAGTAAAGATTTCAGGCGTCCTGAAAGATGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACGCGGTGGGCTCAGAGAAGCCGGTTGAAGCTGGGCGTTACAGCATGGATGTGGAGTACg                                                                                                      <  2:223864/244‑1 (MQ=255)                                                                                                                                                   ggtCGGTTATAAGTTCTGAGTAGCCAGGTAATACAGGGTGATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTTAAAGCAAAACGTAACAGGACCACGGTGGTGGTGAGCACGCTGGCGTCAGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGACGTTGAGTACGGt                                                                                                    <  2:191792/250‑1 (MQ=255)                                                                                                                                                   ggtCGGTTATAAATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGt                                                                                                    >  1:72875/2‑251 (MQ=255)                                                                                                                                                             aaattCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAgtg                                                                                          <  1:350811/248‑3 (MQ=255)                                                                                                                                                               attCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGTTTTTTTGTGGGGTGAATATGGCAGTATAGATTTCAGGAGGCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGTATGTGGAGTACGGTCAGTACAgtgtc                                                                                        <  2:192808/250‑5 (MQ=255)                                                                                                                                                                    gATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAgtgtcatcc                                                                                    <  1:14988/250‑9 (MQ=255)                                                                                                                                                                    gATTAGCCAGGTAACACAGTGTTATGACAGCCCACCGGTTCAGGCGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAAAGTAACAGCACCACGGTGGTGGTGAACACGCTGGCCTCAGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGACGTTGAGTACGGTCAGTACAGCGTTATTCt                                                                                   >  1:344460/1‑251 (MQ=255)                                                                                                                                                                    gATTAGCAAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGAGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAgtgtcatcct                                                                                   >  1:324221/1‑242 (MQ=255)                                                                                                                                                                              gTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAgtgtcatcctgcaggttgac                                                                         <  2:9245/251‑20 (MQ=255)                                                                                                                                                                                 acacAGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCACGACGTAACGGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTCCGGTCCGTACAgtgtcatcctgcaggatgacggt                                                                      >  1:356569/1‑229 (MQ=255)                                                                                                                                                                                 acacAGTGTTATGACAGCCAGCCGGAACCGGTGGGCTTTTTTGCGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGCGAATCCGGATGCAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTAccgtgtcatcctgcaggttgacggt                                                                      >  2:54950/1‑227 (MQ=255)                                                                                                                                                                                  cacaGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAgtgtcatcctgcaggttgacggtt                                                                     >  1:391761/1‑228 (MQ=255)                                                                                                                                                                                    caGTGTTATGACAGCCCGCCGGAACCGGTGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAgtgtcatcctgcaggttgacggtttt                                                                   <  2:314857/251‑26 (MQ=255)                                                                                                                                                                                                                cggacTTTTTTGTGGGGTGAATATGGCAATAAAGATTTCAGATGTACTGAACGACGGGACAGGAAAACCGGTACAGAACTGCACAATACAGCTGAACGCAAAAAGTAACAGCACCACGGTGGGGGTGAACACGCTGGCCTCAGAAACTCCGGCTGAAGCAGGGCGTTACAGCATGGACGTTGAGTACGGACAGTACAGCGTTATTCGGTTGGTGTAAGGATTCCCGCCGTCACATGCCGGGACCATTCCCg                                       >  2:456643/5‑251 (MQ=255)                                                                                                                                                                                                                 gggtttttttGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGAGGGCATAGGAAAACCGTGACAGAACTGAACAACCCAGCTGAAAGCAAAACTTAGCAGCTCCGGGGTGGTGGTGAGCACGCTGGCCTCAGAAAATCCGGATGAAGCGGGGTGTTACATCTTGGACTTTGGGTACGGTAAGGGTAGGGTTATTCTGTTGTGGGAAGTGTTTCCGCCGTCACATGCCGGGAGCATTACCgt                                      <  2:251722/247‑1 (MQ=255)                                                                                                                                                                                                                     ttttttGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAGTGTCATCCTGCAGGTTGACGGTTTTCCACCATCGCACGCCGGGACCATCACCGTGTAt                                  >  1:12564/1‑251 (MQ=255)                                                                                                                                                                                                                      ttgtgggggggTGAATAGGGCAGTAAAAATTTCAGGTGTACTAAAAGACGGCCCAGGAAAACCGGTACAAAACTGCACAATCCAGCTAAAAGCAAAACGTAACGGCACCACGGGGGTGGTGAACACGCGGGCCTCAGAAAATCCGGAGGAAGCCGGGTGTTACAGCATGGACGTTGAGTCCGGTCAGTACAGCGTTATTCTTTTGGTGTAAGGATTCCCGCCGTCACATGCCGGGACCATTACCGTGTa                                   <  2:377348/242‑1 (MQ=255)                                                                                                                                                                                                                             ggggAGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGAAAAACCGGTACAGACCTGCACACTCCAACTGAAAGCAAAACGTAACAGCACCACGGTGGAGGTGAACACGCTGGCCTAAGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGCCGTTGCGTACGGTCAGTACAGCGTTATTCTGTTGGTGGAAGGATTCCCGCCGTCACATGCCGGGACCATTACCGTGTATGAAGATtc                          >  2:297954/1‑251 (MQ=255)                                                                                                                                                                                                                                    atatGGCAGTAATGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAGTGTCATCCTGCAGGTTGACGGTTTTCCACCATCGCACGCCGGGACCATCACCGAGTATGAAGATTCACAAccg                   >  1:228729/1‑250 (MQ=255)                                                                                                                                                                                                                                    atatGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAACACGCTGGCCTCAGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGACGTTGAGTACGGTCAGTACAGCGTTATTCTGTTGGTGGAAGGATTCCCGCCGTCACATGCCGGGACCATTACCGTGTATGAAGATTCTCAAccc                   >  1:200756/1‑251 (MQ=255)                                                                                                                                                                                                                                    atatGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAGTGTCATCCAGCAGGTTGACGGTTTTCCACCATCGCACGCCGGGACCATCACCGTGTATGAAGATTCACAAccg                   >  1:216607/1‑250 (MQ=255)                                                                                                                                                                                                                                      atGGCAGTAAAGATTTCAGGAGTTCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAGTGTCATCCTGCAGGTTGACGGTTTTCCACCATCGCACGCCGGGACCATCACCGTGTATGAAGATTCACAAccgg                  <  2:336621/250‑3 (MQ=255)                                                                                                                                                                                                                                        ggCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAGTGTCATCCTGCAGGTTGACGGTTTTCCACCATCGCACGCCGGGACCATCACCGTGTATGAAGATTCACAAccgggg                <  2:107834/250‑5 (MQ=255)                                                                                                                                                                                                                                         gCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAGTGTCATCCTGCAGGTTGACGGTTTTCCACCATCGCACGCCGGGACCATCACCGTGTATGAAGATTCACAAccggggac              <  2:271516/251‑7 (MQ=255)                                                                                                                                                                                                                                            gTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAGTGTCATCCTGCAGGTTGACGGTTTTCCACCATCGCACGCCGGGACCATCACCGTGTATGAAGATTCACAACCGGGGACGCt           >  1:50414/1‑251 (MQ=255)                                                                                                                                                                                                                                                aGATTTCAGGAGTTCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCTGGATTAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGGACAGTGTCATCCTGCAGGTTGACGGTTTTCCACCATCTCACGCCGGGACCATCACCGTGTATGAAGATTCACAACCGGGGACGCTGAAt       <  1:444898/251‑1 (MQ=255)                                                                                                                                                                                                                                                aGATTTCAGGAGTCCTGAAAGACGGCACAGTAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGGGGAGAACGGTCAGTACAGTGTCATCCTGCAGGTTGACGGTTTTCCACCATCGCACGCCGGGACCATCACCGTGTATGAAGATTCACAACCGGGGACGCTGAAt       >  2:107083/1‑251 (MQ=255)                                                                                                                                                                                                                                                   tttCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGACCTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGAGAACACGCTGGCCTCAGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGACGTTGAGTACGGTCAGTACAGCGTTATTCTGTTGGTGGAAGGATTCCCGCCGTCACATGCCGGGACCATTACCGTGTATGAAGATTCTCAACCCGGTACGCTGAATGAt    >  1:194147/1‑251 (MQ=255)                                                                                                                                                                                                                                                     tCAGGAGTCCTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGGTGAACACGGTGGGCTCAGAGAATCCGGATGAAGCCGGGCGTTACAGCATGGATGTGGAGTACGGTCAGTACAGTGTCATCCTGCAGGTTGACGGTTTTCCACCATCGCACGCCGGGACCATCACCGTGTATGAAGATTCACAACCGGGGACGCTGAATGAttt  >  1:204163/1‑251 (MQ=255)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                      ACCGGAAGTGATGACGGTCGCCACAGCAACACGTCTCTGGCGTGGGGAGCTGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCGGGCTTTTTTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAACACGCTGGCCTCAGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGACGTTGAGTACGGTCAGTACAGCGTTATTCTGTTGGTGGAAGGATTCCCGCCGTCACATGCCGGGACCATTACCGTGTATGAAGATTCTCAACCCGGTACGCTGAATGATTT  >  NC_000913/1428820‑1429314

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑