| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,475,493 | T→C | F19F (TTT→TTC) | yjgL → | protein YjgL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,475,493 | 0 | T | C | 100.0% | 71.8 / NA | 20 | F19F (TTT→TTC) | yjgL | protein YjgL |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (11/9); total (11/9) | |||||||||||
ACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGAT‑ATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAA‑GGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAA > NC_000913/4475248‑4475731 | aCCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTGTTTTGAT‑ATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTAGTCACTCAA‑GGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTCAAACa < 1:29410/251‑1 (MQ=255) gcCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGAT‑ATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAA‑GGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTCAAACAAAAAAGTGAAGTTTTAAATAc < 1:350560/251‑1 (MQ=255) cAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGAT‑ATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAA‑GGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTCAAACAAAAAAGTGAAGTTTTAAATACCt > 1:443186/1‑251 (MQ=255) ggTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGAT‑ATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAA‑GGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTCAAACAAAAAAGTGAAGTTTTAAATACCTGGCgtgt < 2:339124/251‑1 (MQ=255) gCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTTATTATTTTTTTGTGATTAAATTTTGTAATGTTTTGACGTTCTTATTCCCTCAT‑GGATTTGGTCAGGAGCAAAATATCTGTTTTAAATTATTCCCAACCCATTACATAACCCGACATTTTCAAACAAAAAGGTGATTTTTTAATTCCCTggattgttgacatga > 2:17051/1‑237 (MQ=255) gAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGAT‑AATTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAA‑GGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACAAATTACATTAGCCGACAATTTCAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGGATGAATGAATTTGc > 1:300481/1‑251 (MQ=255) aTGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGAT‑ATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAA‑GGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTCAAACAAAAA‑GTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTa < 2:102709/251‑1 (MQ=255) tGATGGCGTGATGACTTTTCGACGGAAATAACTCAAGGTTTACGGAGAGTTTGTGAAAAGAGCGTTTTTTGAT‑ATTTTTTTGTGAGTAAAATTTGAAATGCTTAGACGGTATTATTCA‑ACAACGAAGTTCGTCATGAGCAAAAAAACAGATTTAAATTATTATCAAAACATTAGCTTAGCCGACAGTTTCAAACAAAAAAGAGAAGTTTTAAATACCTGGCGTGTTGGAAGGAATGAGTTTGCCCATATTg > 2:214438/1‑251 (MQ=255) gCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGAT‑ATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAA‑GGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTCAAACaaaa > 1:349981/1‑193 (MQ=255) gCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGAT‑ATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAA‑GGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTCAAACaaaa < 2:349981/193‑1 (MQ=255) tgatgcCTTTTAGCCGTAAATAACTACAGGCTTACGGCGAGTTTGTGAAACGAGCGTTTTTTGAT‑ATTTTTTTTTGAGTAAAATTTGTAATGCTTAGAAGTTCTTATTCACTCAA‑GGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAAACGACAATTTCAAACAAAAAAGTGAAGATTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCgggggg > 2:285963/1‑251 (MQ=255) aCTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGAT‑ATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAA‑GGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTCAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCGGGGGGCAGGATAACAGAAGGAATAttc < 1:395422/251‑1 (MQ=255) cACTCAA‑GGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTCAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGt > 2:370755/1‑251 (MQ=255) aa‑GGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTCAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGaa > 1:299489/1‑250 (MQ=255) cAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTCAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCGGGGGGAAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTCATAtt > 2:386568/1‑250 (MQ=255) aaaTTATTCTCAACACATTACATTAGCCGACAATTTCAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTCATATTAAGTCCTCATCTTAt < 2:447615/250‑1 (MQ=255) aaTTATTCTCAACACATTACATTAGCCGACAATTTCAAACAAAAAAGTGAAGTTGTAAATACCTGGCGTGGTGGAATGAATGATTTTGCCCGTATTGCCGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTGGGCAAAGATATTGACCCTGGGTTATGTGGATTTTAGTAAACGCTCCAACGAAGCGGGTAGAAATATGATTGCTCATATTAAGTCCTCATCTTATTc < 2:404749/251‑1 (MQ=255) attattCTCAACACATTACATTAGCCGACAATTTCAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTCATATTAAGTCCTCATCTTATTCt > 1:348032/1‑251 (MQ=255) acattaGCCGACAATTTCAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCa > 2:107576/1‑250 (MQ=255) aGCCGACAATTTCAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCTCGTATTGCCGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTCCCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGaaa < 1:138025/251‑1 (MQ=255) | ACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGATGACTTTTCGCCGTAAATAACTCAAGGTTTACGGCGAGTTTGTGAAAAGAGCGTTTTTTGAT‑ATTTTTTTGTGAGTAAAATTTGTAATGCTTAGACGTTCTTATTCACTCAA‑GGAGTTCGTCATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAA > NC_000913/4475248‑4475731 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |