Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,542,042 IS1 (+) +8 bp coding (6‑13/597 nt) fimE → regulator for fimA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3583428 =NA (NA)35 (0.850) 35/482 0.3 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 4542049 0 (0.000)coding (13/597 nt) fimE regulator for fimA
* ? NC_000913 = 3584195NA (NA)47 (1.130) 46/484 0.1 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 4542042 = 0 (0.000)coding (6/597 nt) fimE regulator for fimA

TTTTAAGCAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCC  >  NC_000913/4541802‑4542298
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                         
gacgtggtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGtt                                                                                                                                                                                                                                                        >  1:7327‑M2/241‑251 (MQ=255)
    aaGCAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACTTCggtgat                                                                                                                                                                                                                                                     >  2:435562‑M2/1‑244 (MQ=255)
    aaGCAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatg                                                                                                                                                                                                                                                    <  2:89445‑M2/251‑8 (MQ=255)
       cAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTGTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATAGATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctg                                                                                                                                                                                                                                                 >  1:227558‑M2/1‑241 (MQ=255)
           atggatgacggatggctggccgctgtatgaatccctcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCgg                                                                                                                                                                                                                                              <  1:392252‑M2/21‑1 (MQ=255)
              gatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgtgctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTaaa                                                                                                                                                                                                                                          <  1:214566‑M2/25‑1 (MQ=255)
                  gcggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaaatcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAaagaag                                                                                                                                                                                                                                      <  2:388358‑M2/29‑1 (MQ=255)
                   aaTCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactg                                                                                                                                                                                                                                      <  1:157196‑M2/250‑22 (MQ=255)
                                  aTTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatgg                                                                                                                                                                                                                      >  1:30335‑M2/1‑214 (MQ=255)
                                      tgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCg                                                                                                                                                                                                                  >  1:357412‑M2/203‑251 (MQ=255)
                                                 tgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACgg                                                                                                                                                                                                       >  1:220016‑M2/192‑251 (MQ=255)
                                                  gaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTTAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACggg                                                                                                                                                                                                      <  1:190984‑M2/61‑1 (MQ=255)
                                                    agggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCTGTAAAGAAGGTCAGGCCATGATGCAGGCGGTTTGTTACGGGGc                                                                                                                                                                                                    <  1:60817‑M2/63‑1 (MQ=255)
                                                       gaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGAGGCAAc                                                                                                                                                                                                 <  1:118123‑M2/66‑1 (MQ=255)
                                                                aGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATGGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACAGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGAGAGTAAACGTAggtgatgctgcgaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt                                                                                                                                                                                        <  2:7413‑M2/251‑68 (MQ=255)
                                                                  gtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCag                                                                                                                                                                                        >  1:435833‑M2/175‑249 (MQ=255)
                                                                    ggtgtcaCATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTTACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct                                                                                                                                                                                     >  2:127675‑M2/3‑180 (MQ=255)
                                                                      tcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGccagagactt                                                                                                                                                                                  >  2:30808‑M2/171‑248 (MQ=255)
                                                                        tCACATTAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc                                                                                                                                                                                  <  1:120958‑M2/249‑74 (MQ=255)
                                                                           aagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAgagattattttc                                                                                                                                                                             >  1:208767‑M2/166‑248 (MQ=255)
                                                                             gcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCtt                                                                                                                                                                           <  1:203986‑M2/88‑1 (MQ=255)
                                                                                  atacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTc                                                                                                                                                                       <  2:208767‑M2/92‑1 (MQ=255)
                                                                                    acgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgtgctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTg                                                                                                                                                                     <  1:156091‑M2/94‑1 (MQ=255)
                                                                                       tttattttTGTATGATATTGACTGTAATTGACGGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTCACCGATTGAGGTTTCCTATAGGTATTCATTCAGACATATCTCAGTTGGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccagcttactgagttagtgtatgatggtggtttggaggtgcgccagtggcttctgcttccatcagctatgcctcctgtt                                                                                                                                                                  >  2:996‑M2/1‑161 (MQ=255)
                                                                                                       ataacctgaatctgaggcagcaccgggctcggctgggacggaagtcgctgtcggtctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactaacaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGGTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGAt                                                                                                                                                 <  2:333672‑M2/114‑1 (MQ=255)
                                                                                                         aacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGc                                                                                                                                               >  1:253510‑M2/136‑251 (MQ=255)
                                                                                                                atctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGtatttg                                                                                                                                        >  2:43568‑M2/129‑249 (MQ=255)
                                                                                                                aaTTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaac                                                                                                                                        <  1:419605‑M2/251‑116 (MQ=255)
                                                                                                                    gaggcagcacctggcactgctgggactgaagtcgctggcgttcgcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacacgatcaataagttggagtcattaccTAAACGACGTTATCTTTCCGGTAAAGAAGTTCAGGCCATGATTCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGATATTATTGTCTTATTCTGTTGGCATATCGGCATGGGAAGCGTATTAGt                                                                                                                                       <  2:245964‑M2/124‑1 (MQ=255)
                                                                                                                    gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGaa                                                                                                                                    <  1:215705‑M2/127‑1 (MQ=255)
                                                                                                                    gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGa                                                                                                                                     <  1:30808‑M2/126‑1 (MQ=255)
                                                                                                                        gATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaa                                                                                                                                  <  1:408386‑M2/249‑122 (MQ=255)
                                                                                                                               acaTCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctctcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgcc                                                                                                                         <  2:353715‑M2/251‑131 (MQ=255)
                                                                                                                                        cGTGTGTGGATATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGAACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgccggggtggtgcgtaacggcaaacgcaccgccggacatc                                                                                                                  <  2:29831‑M2/249‑138 (MQ=255)
                                                                                                                                         gtgtgtGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagc                                                                                                               <  1:294181‑M2/251‑141 (MQ=255)
                                                                                                                                            acggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTTATCTGCATTATCAGgac                                                                                                            <  2:53668‑M2/151‑1 (MQ=255)
                                                                                                                                             gtgGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtg                                                                                                                                                                                                                    <  1:38008‑M2/146‑40 (MQ=255)
                                                                                                                                             gtgGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtg                                                                                                                                                                                                                    >  2:38008‑M2/1‑107 (MQ=255)
                                                                                                                                              ggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGat                                                                                                                                                                                    <  1:348609‑M2/79‑1 (MQ=255)
                                                                                                                                                          tATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctacggacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctcggctctca                                                                                               >  2:65757‑M2/1‑94 (MQ=255)
                                                                                                                                                          cgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGa                                                                                              <  2:341741‑M2/165‑1 (MQ=255)
                                                                                                                                                           gttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaagaagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGt                                                                                                                                                                                                                                     <  1:420444‑M2/30‑1 (MQ=255)
                                                                                                                                                           gttctcaaaataggtggagctgcatgacaaagtcatcgggcattatatgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGt                                                                                                                                                                                                                                     >  2:420444‑M2/86‑115 (MQ=255)
                                                                                                                                                             tctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTGCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGTGATGCGTATTAGGGAACTTCTTGATCTGCATGATCTGGACCTTGACCGTAATGAAg                                                                                            <  2:456463‑M2/167‑1 (MQ=255)
                                                                                                                                                                      cggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGaataa                                                                                   <  1:78266‑M2/176‑1 (MQ=255)
                                                                                                                                                                       aaTTTTGACCGATTGATGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttacggatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtgttgcgtaacggcaaaagcaccgccggacatcagcgctagctctgctctcactgccgtaaaaca                                                                                  >  2:212631‑M2/1‑81 (MQ=255)
                                                                                                                                                                           gagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTc                                                                             <  1:340969‑M2/182‑1 (MQ=255)
                                                                                                                                                                            tGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgta                                                                                                                                          >  1:365391‑M2/1‑76 (MQ=255)
                                                                                                                                                                            tGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgta                                                                                                                                          <  2:365391‑M2/189‑114 (MQ=255)
                                                                                                                                                                             gACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaccggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaac                                                                           <  1:395597‑M2/251‑177 (MQ=255)
                                                                                                                                                                                cGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgc                                                                        <  1:388901‑M2/251‑180 (MQ=255)
                                                                                                                                                                                   tgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACg                                                                                                                                                                                                        >  1:414158‑M2/62‑120 (MQ=255)
                                                                                                                                                                                   tgacaaagtcatcgggcattatctgaacataaaacacgatcaataagttggagtcatgaccTAAACGTCGTTATCTTACCGGTAAAGAAGGTCAGGCCATGATGCAGGCGGTTTGTTACg                                                                                                                                                                                                        <  2:414158‑M2/59‑1 (MQ=255)
                                                                                                                                                                                      caaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTGACCGGTAAAGAAGTTCAGGCCATGATGCAGGCTGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGTCTgaag                                                                  <  1:130067‑M2/193‑1 (MQ=255)
                                                                                                                                                                                      aGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGGGAGTAAACGTCggtgatgctgccaacgtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttca                                                                  >  2:419605‑M2/1‑66 (MQ=255)
                                                                                                                                                                                         agtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTAGCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAAc                                                               <  2:220016‑M2/196‑1 (MQ=255)
                                                                                                                                                                                          ttCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcactt                                                               <  1:353176‑M2/250‑189 (MQ=255)
                                                                                                                                                                                          gtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCATAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACg                                                              <  1:58385‑M2/197‑1 (MQ=255)
                                                                                                                                                                                               ataGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacacc                                                          >  1:89445‑M2/1‑57 (MQ=255)
                                                                                                                                                                                                 ggcattatctgaacctaaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGattttt                                                       >  1:129655‑M2/48‑250 (MQ=255)
                                                                                                                                                                                                 aGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctgctgacggggtggtg                                                                                                                                              >  1:338070‑M2/1‑55 (MQ=255)
                                                                                                                                                                                                 aGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtg                                                                                                                                              <  2:338070‑M2/164‑110 (MQ=255)
                                                                                                                                                                                                  ggTATTCATTCAAATATATCTCAGTTAGTAGTACTTCTATTGTGAGTAAACGTCggtgatgcttccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctagcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctcttcgcgcacggccgtaaaacagggcaactgcagttcacttactccgctt                                                      >  2:190527‑M2/1‑54 (MQ=255)
                                                                                                                                                                                                  ggTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgctt                                                      <  2:371895‑M2/251‑198 (MQ=255)
                                                                                                                                                                                                     ttatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTg                                                                                                                             >  2:21685‑M2/44‑177 (MQ=255)
                                                                                                                                                                                                     ttatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTg                                                                                                                             <  1:21685‑M2/134‑1 (MQ=255)
                                                                                                                                                                                                        cattcaAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatgcaaccgcagttcacttaacccgcttctccacc                                                <  2:5386‑M2/251‑204 (MQ=255)
                                                                                                                                                                                                           tcaAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctggccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaaccc                                              >  1:45257‑M2/1‑45 (MQ=255)
                                                                                                                                                                                                           gaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGtt                                                <  2:53151‑M2/211‑1 (MQ=255)
                                                                                                                                                                                                              aaTATATCTCAGTTAGGAGTACTTCTATTGGGAGTAAACTTCggtgatgcggccaacttactgatttagtgttggatgttgtttttgaggtgctccagtggcttctgttgctatcagctgtccctccttttcagctactgacgggtgggggcgggacggcaaaagcaccgccggacatcagcgctatctctgcgctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggta                                          >  2:390052‑M2/1‑42 (MQ=255)
                                                                                                                                                                                                                     ctcAGTTACGAGCACTACTATTGTGAGTACACGTCggtgatgctgcccacttactgatttcgtgtctgatggtgtttttgaggtgctccagtggcttctgcttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatccgcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcacc                                    <  2:229859‑M2/250‑216 (MQ=255)
                                                                                                                                                                                                                             ggAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatc                            <  1:19626‑M2/250‑224 (MQ=255)
                                                                                                                                                                                                                              taagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGGATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGc                          >  1:385769‑M2/19‑251 (MQ=255)
                                                                                                                                                                                                                                agttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGCTGCAGGCGGTTTGTTACCGGGCAACGGGAGCCCAAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCCTTATCAGGACCTTGACCCTCATATAGGGAGAATAAATATTCGCCGAATGAAGAAAGGATTTTCTAACGTTCACCCGTTCCGTTTTGATGAGcgg                        >  2:38368‑M2/17‑250 (MQ=255)
                                                                                                                                                                                                                                   tggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAAAGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCCTATCGGCCTGGGATGCGTATTAGTGAACTGCTTGCTCTGCATTATCCGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGCTTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGa                      >  1:279513‑M2/14‑250 (MQ=255)
                                                                                                                                                                                                                                   tggaggcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGGTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGa                      <  2:63275‑M2/237‑1 (MQ=255)
                                                                                                                                                                                                                                         cattaccTAAACGTCGTTATCTTACCGTGAAAGAAGTTCAGGCCATGATGCCGGCGTGTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGGCGACTGAAGAACGGATTTTCGACCGTTCACCCGTTACGTTTTGATGAGCGTGAGGCCgtt               <  2:237768‑M2/244‑2 (MQ=255)
                                                                                                                                                                                                                                         cattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTTTTAAGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATggg                                                                                                                                                   >  2:230929‑M2/8‑119 (MQ=255)
                                                                                                                                                                                                                                         cattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATggg                                                                                                                                                   <  1:230929‑M2/112‑1 (MQ=255)
                                                                                                                                                                                                                                             accTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATAGCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAAc           <  2:385769‑M2/248‑1 (MQ=255)
                                                                                                                                                                                                                                               cTAAACGTCGTTATCTTACCGGTAACGAAGTTCAGGCCATGATGCAGGCGGTTTGTTTAAGGGCAACGGGAGGCAGAGGTTATTGTCTTATTATGTTGGCAAATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGAATTATCAGGACCTTGCCCTTAATGGAGGTAGAATAAATATTAGCCGACTGACGAACGGATTTTCTACCGGTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGc         >  2:360784‑M2/2‑251 (MQ=255)
                                                                                                                                                                                                                                                 aaaCGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTATGGGGCCAAGGGAGCCAGGGATTATTGTCTTATTCTGTTGGCATATCGGCCTGGGATGCGTCTTAGTGAAATGCTTGATCTGCATTCTCAGGCCCTTGACCTTAATGAAGGTAGAATAAATATTCCCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGGTTTGATGGGGGTGAAGCCGTGGGACGCTg       >  2:36219/1‑251 (MQ=255)
                                                                                                                                                                                                                                                       cggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaccggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggccatgaatggcgttgg  <  2:184060‑M2/250‑250 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                         
TTTTAAGCAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCC  >  NC_000913/4541802‑4542298

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.