Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,123,934 IS1 (+) +9 bp coding (515‑523/1026 nt) cytR ← DNA‑binding transcriptional repressor CytR

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3583428 =NA (NA)37 (0.890) 36/484 0.3 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 4123942 0 (0.000)coding (515/1026 nt) cytR DNA‑binding transcriptional repressor CytR
* ? NC_000913 = 3584195NA (NA)34 (0.820) 31/484 0.4 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 4123934 = 0 (0.000)coding (523/1026 nt) cytR DNA‑binding transcriptional repressor CytR

ATCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGATTTTGATGCGCACAGTCGCCAATCAGCACCAGATATCCGTGATTTGCCGCCG  >  NC_000913/4123695‑4124182
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                
acgtggtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATgcgg                                                                                                                                                                                                                                               <  2:2628‑M2/12‑1 (MQ=255)
    ggtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGcggcgg                                                                                                                                                                                                                                            <  1:79293‑M2/15‑1 (MQ=255)
      aTGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACCGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggggaagct                                                                                                                                                                                                                                         <  1:271991‑M2/251‑10 (MQ=255)
        ggCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgc                                                                                                                                                                                                                                       >  1:240865‑M2/1‑240 (MQ=255)
              atgacggatggctggacgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcactaagttggagtcattaccCATCAACTGCGGCGGTccgatttttg                                                                                                                                                                                                                                 >  2:92149‑M2/226‑247 (MQ=255)
              agaCAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaactt                                                                                                                                                                                                                                 >  1:399700‑M2/1‑234 (MQ=255)
                ccagcagtAGGCGTTTGTGGAAGATCAAGCAGCTGCTGCCTCGCTGTGCTTCCGTCTTCGAAGGTGAAGTCGCCACGGGCGAGGTATTGCGGAGCAACCATAATGCCGCAGCGACGCAGCGCTTGAACATAGCCTTCCAGGCGGTCTTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATTCCCTTGCTTATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttac                                                                                                                                                                                                                               >  1:23383‑M2/2‑232 (MQ=255)
                     agTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatt                                                                                                                                                                                                                          <  1:224025‑M2/251‑25 (MQ=255)
                       tAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGGCACAGCGGCATTTCTTCGGGGCCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATAAAAATAATTTACTGCCTCAAATGgggggtgctgcccacttacttgtttt                                                                                                                                                                                                                        <  2:373651‑M2/251‑27 (MQ=255)
                          tggccgctgtatgaatcccgcctgaaggggaagctgcacgtaatcagcacgcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggcagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaaccatcaaatgcggcggctagatttttggtaatgactga                                                                                                                                                                                                                      >  2:216023‑M2/214‑228 (MQ=255)
                            gccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGCCAGATTTTCGATATGAACTGTAgg                                                                                                                                                                                                                   >  2:8222‑M2/212‑251 (MQ=255)
                                 gggaAGATCAAGCAGCTGCTGCATCGCTTTGCCTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatg                                                                                                                                                                                                              >  2:45717‑M2/2‑215 (MQ=255)
                                    atgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGcagctcca                                                                                                                                                                                                           <  1:156990‑M2/48‑1 (MQ=255)
                                         cAAGCAGCTGCTGCATCGCTTTGCTTCCGGCCTCGAAGCTGCGGTAGACACCGCCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGCCCGGCTATACAGGCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggcgatgctgccaacttactgatttagtgtatgatggtgttttt                                                                                                                                                                                                      <  1:64612‑M2/251‑45 (MQ=255)
                                          cccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCg                                                                                                                                                                                                     <  1:374057‑M2/54‑1 (MQ=255)
                                          aaGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGCGACGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCCATACAGCCAATCCGTTTATGCCCTTGCCCATATAAATAATTTACTGCATCAAATGggtgatgctgccaccttactgatttattgtctgatggtgtttttt                                                                                                                                                                                                     <  2:72405‑M2/251‑46 (MQ=255)
                                              agcTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt                                                                                                                                                                                                 <  1:293857‑M2/251‑50 (MQ=255)
                                                   agggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAAAGTTTCGGTGTGAACTGAAGGCAGCTCCCGCTCCCGGGCAAAtt                                                                                                                                                                                            >  2:168892‑M2/189‑251 (MQ=255)
                                                    gggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcccctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTTCAAAttc                                                                                                                                                                                           <  2:262752‑M2/64‑1 (MQ=255)
                                                    gggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAAATGTAGGCAGCTCCAGCTCCGGTGCAAAttc                                                                                                                                                                                           >  1:216504‑M2/188‑251 (MQ=255)
                                                      cATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt                                                                                                                                                                                         <  1:55004‑M2/251‑58 (MQ=255)
                                                              tGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatga                                                                                                                                                                                                                >  1:327318‑M2/1‑186 (MQ=255)
                                                              tGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatga                                                                                                                                                                                                                <  2:327318‑M2/220‑35 (MQ=255)
                                                                  tCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt                                                                                                                                                                               >  1:94467‑M2/1‑182 (MQ=255)
                                                                   aatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGGCAGATTGTCGATATGAACTGTAGGCATCTCCAGCTCCGGGGCAAATTCGTTCGCCATCACCAt                                                                                                                                                                            >  1:246448‑M2/173‑251 (MQ=255)
                                                                      gCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggggtttttgaggtgctccagtggcttctgtttctatc                                                                                                                                                                         <  1:420141‑M2/251‑74 (MQ=255)
                                                                                      cagcgaattgagcggcataacctgaatctgaggcagcaactggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCCGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGt                                                                                                                                                         >  1:38653‑M2/154‑251 (MQ=255)
                                                                                           aattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAAATCGTTCGCCATCCCCATCGGCGGCAGAATACGCTGTTCCTc                                                                                                                                                    >  2:286056‑M2/149‑251 (MQ=255)
                                                                                             ggCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctac                                                                                                                                                  >  1:425321‑M2/1‑155 (MQ=255)
                                                                                                    gcataatctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGc                                                                                                                                           >  1:127127‑M2/140‑251 (MQ=255)
                                                                                                                 ccATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacg                                                                                                                              >  1:406734‑M2/1‑135 (MQ=255)
                                                                                                                        gCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaa                                                                                                                        >  1:206200‑M2/1‑128 (MQ=255)
                                                                                                                         ccGCAGCGAAGCAGCGCCTGAACATCGCCTTGCAGGCGGTAGTTACACAGCGGCATCTCTTCGGGACCGGCTATCCAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagc                                                                                                                      >  2:340773‑M2/1‑127 (MQ=255)
                                                                                                                              tggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCCTCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCCAACGGCAGCCCTTAACCCAGc                                                                                                                  >  2:107976‑M2/114‑250 (MQ=255)
                                                                                                                                gcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAAc                                                                                                                                    <  1:332237‑M2/119‑1 (MQ=255)
                                                                                                                                gcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGACAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGGGCAAATTCGTTCGCCATCACCATCGGCGGCAGGTTACGCTGTtcctcaatgctggcatcaaacataacgggaaagcgacgtgt                                                                                                                >  2:332237‑M2/112‑230 (MQ=255)
                                                                                                                                   gCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGAAACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgggggggtgcgtaacggcaaaagcaccgccggac                                                                                                            <  1:161899‑M2/251‑135 (MQ=255)
                                                                                                                                             aaCATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTTCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccagcttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgcta                                                                                                  >  1:429988‑M2/1‑107 (MQ=255)
                                                                                                                                               aagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCCGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCCACAACCTGCCATCCAtt                                                                                                >  2:139381‑M2/97‑251 (MQ=255)
                                                                                                                                                aTAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAGTTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggggtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgggggggtgcgtaacggccaaagcaccgccggccatcagcgctatct                                                                                               <  2:322024‑M2/251‑148 (MQ=255)
                                                                                                                                                     cTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTTATATAAATAATTTACTGCAACAAATGggggatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctctctgctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggaactccgcgctatctctgct                                                                                          <  1:33170‑M2/251‑153 (MQ=255)
                                                                                                                                                       gtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTgg                                                                                         <  1:168892‑M2/162‑1 (MQ=255)
                                                                                                                                                       gtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTgg                                                                                         <  1:315439‑M2/162‑1 (MQ=255)
                                                                                                                                                        gcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGtg                                                                                       <  2:144180‑M2/164‑1 (MQ=255)
                                                                                                                                                         cgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactaccaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCACATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACTGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGtga                                                                                      <  1:301666‑M2/165‑1 (MQ=255)
                                                                                                                                                         cAGGCGGTAGTGACACAGCGGCATCTCGTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctagcagctgtccctcctgttcagctactgacggggtggttcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctca                                                                                      >  1:47145‑M2/1‑95 (MQ=255)
                                                                                                                                                          gttctcaaaatcggtggagctgcatgacaaagtcatcgcgcattatctgaaaataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCCGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGtgat                                                                                     >  1:416374‑M2/86‑251 (MQ=255)
                                                                                                                                                           ggCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggggatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcact                                                                                    <  2:113671‑M2/251‑159 (MQ=255)
                                                                                                                                                             ctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatccataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATTAACTGTAGGCAGCTCCAGCTCCGGTGCCAATTCTTTCGCCATCACCATCGGACGCAGATTACGCTGTTCCTCACTTCTGGCCTCAAACGGCAGCCCTCAACCCAGCACCAACATGCCCTCACTTTGCTTggtgatgct                                                                                  >  2:75430‑M2/83‑249 (MQ=255)
                                                                                                                                                                     cggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCTGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCTGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTTAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGa                                                                          <  1:374022‑M2/177‑1 (MQ=255)
                                                                                                                                                                             gCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAACTAATTTACTGCCTCAAATGggtgatgctgcctacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaac                                                                  <  2:120984‑M2/251‑177 (MQ=255)
                                                                                                                                                                               gcatgacaaagtcatcgggcattatcttaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCGCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCAGCAATTTGCTTGGTGATGATCAAATCGATAAAGGtt                                                                  <  2:258462‑M2/185‑1 (MQ=255)
                                                                                                                                                                                   gacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTcc                                                            <  2:216504‑M2/191‑1 (MQ=255)
                                                                                                                                                                                        agtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCctgctg                                                       <  1:135856‑M2/196‑1 (MQ=255)
                                                                                                                                                                                         gACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcactt                                                      >  1:322024‑M2/1‑63 (MQ=255)
                                                                                                                                                                                         gACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAAGAATTTACTTCATCAAATGggtgatgctgccaactttctgatttagtgtatgatggtgttttggaggtgctccagtggcttctgttgctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgccctcgctgccgtaaaacatggcaactgcagttcactt                                                      >  2:108405‑M2/1‑63 (MQ=255)
                                                                                                                                                                                           ccGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttac                                                    >  1:27558‑M2/1‑61 (MQ=255)
                                                                                                                                                                                              gCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgccgttcacttccacc                                                 <  2:50965‑M2/251‑194 (MQ=255)
                                                                                                                                                                                              cgggcattatctgaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGATTTTg                                                 >  1:316806‑M2/50‑251 (MQ=255)
                                                                                                                                                                                                tataCAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgc                                               <  1:297615‑M2/251‑196 (MQ=255)
                                                                                                                                                                                                          gaacataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGATTTTGATGCGcaca                                        <  1:139381‑M2/211‑1 (MQ=255)
                                                                                                                                                                                                            acataaaacactatcaataagttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGATTTTGATGCGCACAGTCGc                                   >  1:357892‑M2/36‑251 (MQ=255)
                                                                                                                                                                                                             cataaaacactatccataagttggagtcattaccCATCAAATGCGGCGGTCAGACTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGGTTTTTCCTGCTGATTTTGATGCGCACAGTCGcc                                  >  1:396286‑M2/35‑251 (MQ=255)
                                                                                                                                                                                                                   tGCCCTTGCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcac                            <  2:80759‑M2/251‑215 (MQ=255)
                                                                                                                                                                                                                          gCTCATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaa                      >  1:373651‑M2/1‑30 (MQ=255)
                                                                                                                                                                                                                             cATATAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgcggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggccactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatc                   <  2:373638‑M2/250‑224 (MQ=255)
                                                                                                                                                                                                                              atatAAATAATTTACTGCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcat                 <  1:256103‑M2/251‑226 (MQ=255)
                                                                                                                                                                                                                                gttggagtcattaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGATTTTGATGCGCACAGTCGCCAATCAGCACCAGATATCCg               <  1:286056‑M2/236‑1 (MQ=255)
                                                                                                                                                                                                                                 taaataaTTTACTGCATCAAATGggtgatgctgcccacttactgatttagtgtatgctggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattg               <  2:223986‑M2/250‑228 (MQ=255)
                                                                                                                                                                                                                                         attaccCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGATTTTGATGCGCACAGTCGCCAATCAGCACCAGATATCCGTGATTTgcc      <  1:216023‑M2/245‑1 (MQ=255)
                                                                                                                                                                                                                                              gCATCAAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccggaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggccatgaa  >  2:139328‑M2/1‑10 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                
ATCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGATTTTGATGCGCACAGTCGCCAATCAGCACCAGATATCCGTGATTTGCCGCCG  >  NC_000913/4123695‑4124182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.