| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 480,295 | 2 bp→AA | coding (13‑14/219 nt) | hha ← | hemolysin expression‑modulating protein Hha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 480,295 | 0 | G | A | 100.0% | 24.6 / NA | 9 | P5F (CCT→TTT) | hha | hemolysin expression‑modulating protein Hha |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (4/5); total (4/5) | |||||||||||
| * | NC_000913 | 480,296 | 0 | G | A | 100.0% | 26.9 / NA | 9 | P5F (CCT→TTT) | hha | hemolysin expression‑modulating protein Hha |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (4/5); total (4/5) | |||||||||||
ACTGAGGAAGGGATCTTGTCGTACAGTTTATTCATGGTCAATTCGGCGAGGCGGTGATCTGCGGCTGAGTAAAATACCGCCAGTTCATTATCTGATAATTCGTATTTATTTTTCTCGATAACACGCTCCAGCGTGTCAATTGTCTGGCAACGACGTAAACGCATTAAATAATCGGTTTTCGTTAAAGGTTTTTCGGACATACTTCTACCTATGGTTGTAATAATTCTAACAAGATAAACTCGCAGGATTCTCTTTCGTCGCATTGACAAAACAACGGAATAGTCGATTACCTGACTTCCGCCATTTCTGAAGATCCTGCATATTAATACCATAACTACTGAACAACATAAAGGTGTCATCCAGATATTCGTCGATCTGCTCAATGAGCTTATTGTCTTCATTATACTTAATTTTGTAATT > NC_000913/480109‑480528 || acggAGGAAGGGTTCTTGTCGTACAGTTTATTCATGGTCAATTCGGCGAGGCGGTTATCTGCGGCTGAGTAAAATACCGCCAGTTCATTATCTGATAATTCGTATTTATTTTTCTCGATAACACGCTCCAGCGTGTCAATTGTCTGGCAACGACGTAAACGCATTAAATAATCGGTTTTCGTTAAAAATTTTTCGGACATACTTCTACCTATGGTTGTAATAATTCTAACAAGATAAACTCGCAGGATtct < 2:62899/248‑1 (MQ=255) aGGGATCTTGTCGTACAGTTTATTCATGGTCAATTCGGCGAGGCGGTGATCTGCGGCTGAGTAAAATACCGCCAGTTCATTATCTGATAATTCGTATTTATTTTTCTCGATAACACGCTCCAGCGTGTCAATTGTCTGGCAACGACGTAAACGCATTAAATAATCGGTTTTCGTTAAAAATTTTTCGGACATACTTCTACCTATGGTTGTAATAATTCTAACAAGATAAACTCGCAGGATTCTCTTtcgtc < 1:53770/251‑1 (MQ=255) acctccAGTTCATTATCTGATAATTCGTATTTATTTTTCTCGATAACACGCTCCAGCGTGTCACTTGTCTGGCAACGACGTAAACGCATTAAATAATCGGTTTTCGTTAAAAATTTTTCGGACATACTTCTACCTATGGTTGTAATAATTCTAACAAGATAAACTCGCAGGATTCTCTTTCGTCTCATTGACAAAACAACGGAATAGTCGATTACCTGCCTTCCGCCATTTCTGAAGATCCTGCATATTa > 2:182042/5‑250 (MQ=255) aTTCGTATTTATTTTTCTCGATAACACGCTCCAGCGTATCAATTTTCTGGCAACGACGTAAACGCAGTAAATAATCGGTTTTCGTTAAAAATTTTTCGGACATACTTCTACCTATGTTTGTAATAATTCTAACAAGATAAACTCGCAGGATTCTCTGTCGTCTCATTGACAAAACAGCGGAATATTCGATTACCTGACTTCCGCCATTTCTGAAGATCCTGCATAGTAATACCATAACTACTTAACAACAt < 2:266037/251‑1 (MQ=255) ctcGATAACACGCTCCAGCGTGTCAATTGTCTGGCACCGACGTAAACGCATTAAATAATCGGTTTTCGTTAAAAATTTTTCGGACATACTTCTACCTATGGTTGTAATAATTCTAACAAGATAAACTCGCAGGATTCTCTTTCGTCGCATTGACAAAACAACGGAATAGTCGATTACCTGACTTCCGCCATTTCTGAAGATCCTGCATATTAATACCATAACTACTGAACAACATAAAGGTGTCATcc > 2:65708/1‑248 (MQ=255) tCAATTGTCTGGCAAAGACGTAAACAAATTAAATAATCGGTTTTCGTTAAAAATTGTTCGGACATACTTCTACCTATGGTTGTAATAATTCTAACAAGATAAACTCGCAGGATTCTCTTTCGTCGCATTGACAAAACAACGGAATAGTCGATTACCTGACTTCCGCCATTTATGAAGATCCTACATATTAATCCCATAACTACTGAACCACATAAAGGTATCATCCAGTTATTCGTCGATATTCTCAATg > 2:91378/1‑250 (MQ=255) ggtcacaacgTAAACGCATTAAATAACCGGTTCTCGTTAAAAATTTTTCGTACATACTTCTACCTTTGGTTGTAATAATTCTACCATATTAACCTCGCAGGATTCTCTGCCGTCTCTTTGACAAAACAACGGAATAGTCGATTACCTGACTTCCTCCATTGCTCAAGAGCCTTGATATTAATACCATAACTACCCAACAACAAAAATCTGCCATCCAGATATTCGTCAATCTGCGCAATTTGCTTATTg < 2:220044/242‑1 (MQ=255) aaaTAATCGGTTTTCGTTAAAAATTTTTCGGACATACTTCTACCTATGGTTGTAATAATTCTAACAAGATAAACTCGCAGGATTCTCTTTCGTCGCATTGACAAAACAACGGAATAGTCGATTACCTGACTTCCGCCATTTCTGAAGATCCTGCATATTAATACCATAACTACTGAACAACATAAAGGTGTCATCCAGATATTCGTCGATCTGCTCAATGAGCTTATTGTCTTCATTATACTTAATTTTGt < 2:211133/251‑1 (MQ=255) aatCGGTTTTCGTTAAAAATTTTTCGGACATCCTTCTACCTATGGTTGTAATAATTCTAACAAGATACACTCGCAGGATTCTCTTTCGTCGCATTGACAAAACAACGGAATAGTCGATTACCTGACTTCCGCCATTTCTGAAGATCCTGCATATTAATACCATAACTCCTGAACAACATAAAGGTGTCATCCAGATCTTCGTCGATCTGCTCAATGAGCTTATTGTCTTCATTATACTTAATTTTGTAAtt > 1:163143/1‑251 (MQ=255) || ACTGAGGAAGGGATCTTGTCGTACAGTTTATTCATGGTCAATTCGGCGAGGCGGTGATCTGCGGCTGAGTAAAATACCGCCAGTTCATTATCTGATAATTCGTATTTATTTTTCTCGATAACACGCTCCAGCGTGTCAATTGTCTGGCAACGACGTAAACGCATTAAATAATCGGTTTTCGTTAAAGGTTTTTCGGACATACTTCTACCTATGGTTGTAATAATTCTAACAAGATAAACTCGCAGGATTCTCTTTCGTCGCATTGACAAAACAACGGAATAGTCGATTACCTGACTTCCGCCATTTCTGAAGATCCTGCATATTAATACCATAACTACTGAACAACATAAAGGTGTCATCCAGATATTCGTCGATCTGCTCAATGAGCTTATTGTCTTCATTATACTTAATTTTGTAATT > NC_000913/480109‑480528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |