| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,474,425 | T→C | K43R (AAA→AGA) | rpsL ← | 30S ribosomal subunit protein S12 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,474,425 | 0 | T | C | 94.1% | 168.6 / NA | 52 | K43R (AAA→AGA) | rpsL | 30S ribosomal subunit protein S12 |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (23/25); minor base A (3/0); total (26/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
AGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACG > NC_000913/3474181‑3474668 | atccTTAGGTCCCTTCACGCCATACTTGGAACGAGCCTTCTTACGGTCTTTAACGCCGTAGCATTCAAGCGCACCGCGTACGGTGTGGTAACGAATCCCCGGGAGGTCTTTAACGCGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGGGACGGGCACCACCGATGTAGGAATTGACTGCGAAACCGTTAGTCAGACGAACTCGGCATTGTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAg < 1:18920/249‑1 (MQ=255)acctttAGGACGCTCCACGCCATACTGGGAACGAGCCTGCTTACGTTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGTAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAg < 1:11278/247‑1 (MQ=255)aGCCTGAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTGACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCGCGTCCGGTGTGGTAACGAACCCCCGGGAGGTCTTTACCACGACCGCCGCGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAg < 2:62220/251‑1 (MQ=255) ggagtcTTCACGCCATACTTGGAACGGGCCGGCTTACGTTCTTAACCGCGGGAGCAGTCAAGCTCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAATCCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGgtagt < 2:42768/246‑1 (MQ=255) gACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGgtagt > 2:62393/1‑250 (MQ=255) gCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGCAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGtatat > 2:107515/1‑251 (MQ=255) cGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACg > 1:68994/1‑250 (MQ=255) aCTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGGGGTAGTATATACACGAGTACAt > 1:193255/1‑251 (MQ=255) tGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATAc < 1:217010/250‑1 (MQ=255) ggagcGAGCCTGCTTACGTTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACTAACACCCGTGAGGTCATTAACCCGACCGCCACTGATCAGGATCACGGAGTGCTCCTGCAGGTTGGGACCTTCACCACCGATGTAGGAAGTCACTTCTAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGATTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTTCATACGc < 1:230624/247‑1 (MQ=255) gAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGt > 1:214282/1‑251 (MQ=255) tAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCGAGGAGTGGTAGTATAGACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTc < 1:122484/250‑1 (MQ=255) aCGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTcc > 1:209604/1‑249 (MQ=255) cAAGCTCACCTCGTGCGGTGTGGTAACGAACTCCCGGGAGGTCTTGAACACGACCGCCACGGATCAGGATCGCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTGTGCGCAGCGCGGAGGGCGGTTTGGTAGGAGTGGGAGTAGATACACGAGTACATACGCCACGTTTTGGCGGGCATGCTTCTAGCGCAGGCGCGTTg < 2:275718/251‑1 (MQ=255) cgcACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACCCGACCGCCACGCATCAGGATAACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATAAGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCttt > 2:125460/1‑251 (MQ=255) caccacGTACGGCGTGGTAACGAACACCCGGGAGGACTTTCACACGACCGCCACGGATCAGGATCACGGAGTGCTACTGCAGGTTGTGACCTTCAACACCGATGTAGGAAGACACTTCGAAACCGTTAGTAAGACGAACCCGGCATACTTTACGCAGCGCGGAGTTAGGTTTTCTAGGAGTGGTAGTATATAAACGAGAACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCATGAACGTTGCTTTTc > 2:153012/1‑251 (MQ=255) gtactgttttgtagcgatcgcccttgAGGTCTTTAACACGCCCGCCACGCATCAGGATCACGGACTTCTCCTGCCGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCTTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAATTCGGTTTTCTAGTAGTGGTAGTATATCCACGAGTACATACGCCACGTTTTTTCGGGCATTCTTCCATCGCAGTCACGTTGCTTTTCGCAACt < 2:649/226‑1 (MQ=255) aCGGTGTGGTAACGAACACCCGGGAGGACTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGCTGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACttt > 2:157629/1‑251 (MQ=255) gtgtGGAAACGAACCCCCGGGAGGTCTGTAACCCGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGGTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCg < 2:154139/251‑1 (MQ=255) tAACGAACACCCGGGAGGTCTTTAACACCACCGCCACGGATCAGGATCACGGAGAGCTCCTGCAGGTTGTGACCTGCACCCCCGATGTAGGACGTCACTTCGAAACCGTTAGTCAGACGCACACGGCCTACTTTACGCAGCGCGGTGTTCGGTTTTCTAGGAGAGGTAGTCTATACACGAGTACATACGCCACGTTATTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCgcgcccg > 2:29235/1‑245 (MQ=255) ccccGGGAGTTTTTTACCACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGTAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGc < 2:267034/250‑1 (MQ=255) acCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATCCTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGc > 1:158492/1‑251 (MQ=255) aGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCATACCAg < 1:79198/251‑1 (MQ=255) ttgacccGACCTCCACGGATCAGGATCACGTGTTGCTCCTGCAGTTTGTGACCGTCTCCACCGATGTAGGAATTCCCTTCGAAACCGTTAGGCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGTTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGTTTTTCGTACCAGCTGGt < 2:256538/244‑1 (MQ=255) tAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGtt < 1:263326/250‑1 (MQ=255) cggccGCAACGGATAAGGAGCACGGAGTGCTCCTGCAGGTTGTGACCTGCACCACCGATGTAGGAAGACACTTCGAATCCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGATTGGTAGTATATACACGAGTACATGCGCCACGTTTTTGCGTGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTTCCAGCTGGTGAACttt < 2:76853/248‑3 (MQ=255) cGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAg > 2:205214/1‑230 (MQ=255) cGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGGGGTTTGCGTACCAg < 1:205214/230‑1 (MQ=255) cGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACAAGGCATACTTTACGCAGCGCGGAGTTCGGTTTTATAGGCGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCCACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTa > 1:277697/1‑250 (MQ=255) tcaggatcaCGGAGTGCTCCTGCAGGATGTGAACTTCACCACCGATGTAGGAAGTAACTTAGAAACAGTTAGTCAGACGAACACGGCAAACTTTACGCAGCGCGGAGTTCGGTTTTATAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCAAGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAAt > 2:31410/1‑249 (MQ=255) gataaCGGAGGGCTCCTGCAGGTTGTGACCTTCACCAACGATGAAGGAAGTCACTTCGAAACAGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGCGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTcc > 2:42004/5‑251 (MQ=255) caCGGAGTGCTCCTGCAGGTTGTGATCTTTACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTATGAGTGGTAGGATATTCTCGAGTACATACGTCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCTAGCACGTTTTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTgg < 1:19801/251‑1 (MQ=255) caCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTgg < 2:214282/251‑1 (MQ=255) cGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGtt > 2:18581/1‑251 (MQ=255) caccacCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGtaa < 2:68994/250‑1 (MQ=255) accGATGTAGGAAGTCACTTCGAATCCGTTATTCAGACGACCACGGCATACGTTACGCATCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTAGATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACGTTGCGAGCACTTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCGGGTTTTATCGTTTGCTTCGTAAACACGTAATaaaa < 2:255072/251‑1 (MQ=255) aGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATTCTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTTCATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTTCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTGAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTc < 2:184074/250‑1 (MQ=255) aGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCTGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATCGCTCCTGGTTTGAGCTTTTGCGTCGTAAACACGTAATAAAACGTCCTc < 2:184092/250‑1 (MQ=255) gAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTcac > 2:125117/1‑250 (MQ=255) tCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATg > 1:251924/1‑249 (MQ=255) gaaaccggtatccAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGAATATACACGAGTACTTGCGCCTCGGTGTTGCGGGCGTGCTTCCAGCGCAGGCTCGtt < 2:129287/114‑1 (MQ=255) gAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGAGGAGTTCGGTTTAATCGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGAACGtt > 1:129287/1‑126 (MQ=255) cGTTAGTCAGACGAACACGGCATACTTTACGCATCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCg > 2:193738/1‑251 (MQ=255) aGTCAGACGAACACGGCATTCTTTACGCAGCGCGGAGTTCGGTTGTCTAGGAGTGGTAGTATAGACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCCCGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAAt < 2:144088/250‑1 (MQ=255) acacGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGAt > 2:158165/1‑251 (MQ=255) cacGGCTTACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTcaca > 1:77353/1‑220 (MQ=255) cacGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACTCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCATCTTTGCGAGCACGTGGTTTGCGTACCATCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTcaca < 2:77353/220‑1 (MQ=255) ggCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCg < 2:209604/251‑1 (MQ=255) aCTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGaaa > 1:162653/1‑249 (MQ=255) cGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTc > 1:241522/1‑250 (MQ=255) cAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGCGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGACGAATTTTAGGGCGATGCCGAACAGGTGTCa > 2:123003/1‑249 (MQ=255) ggTTTTCTAGGAGTGGTAGTATATACACGAGTCCATAAGCCACGTTCTAGCGGAAATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGAACATGGATTGCAAACCAGCTGGTTAACTGTTACCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATACAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACg > 1:125399/1‑250 (MQ=255) | AGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACG > NC_000913/3474181‑3474668 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |