| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,209,791 | 0 | G | A | 42.2% | 35.5 / 80.6 | 71 | noncoding (18/76 nt) | gltV | tRNA‑Glu |
| Reads supporting (aligned to +/- strand): ref base G (15/26); new base A (15/15); total (30/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.34e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACAT > NC_000913/4209546‑4210029 | cGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAg < 1:160075/251‑1 (MQ=14) gTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑acac > 2:86842/1‑251 (MQ=14) acCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTAGGGAGGGAGCTTACAACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTCACCGTAGGGGAACCTGCGATTGGATCACCTCCTTACCTTACAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACAGATACGTACCCTTCGTCTAGAGACCCAGG‑ACACCGccc > 1:258728/1‑251 (MQ=11) ccATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGAAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGACGCAGACTGATACGTCACCTTCGTCTAGAGGCCCAGG‑ACACCGCCCt > 1:196169/1‑251 (MQ=14) ccATAGGAGTGGGTTGCAAACGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCt > 2:222574/1‑251 (MQ=14) atgggcatGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCttt > 2:26047/8‑251 (MQ=14) aTGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCttt < 1:212574/251‑1 (MQ=31) tGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTc > 1:11815/1‑251 (MQ=31) gggAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGGCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTc < 1:246281/250‑1 (MQ=14) ggTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCAcgg < 2:135702/250‑1 (MQ=14) gggTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCAcggcg < 2:34323/250‑1 (MQ=14) ttGCAAAAGAAGTAGGTCGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTCCCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCAcggcggat > 2:120189/1‑248 (MQ=14) tGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCa < 1:36866/225‑1 (MQ=31) tGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCa > 2:36866/1‑225 (MQ=31) tGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTaa > 2:188429/1‑250 (MQ=31) agaagTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGt < 2:217410/251‑1 (MQ=31) agaagTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑ggggg > 1:44631/1‑250 (MQ=14) aagTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTc < 1:102927/251‑1 (MQ=14) agTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCg < 1:268316/251‑1 (MQ=14) taggtagCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGGTCGa > 1:3340/1‑250 (MQ=14) aggtagCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAAt < 1:13278/251‑1 (MQ=31) aCCTTCGGGAGGGCGCTTACCACTTTTTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAgggg < 2:246187/251‑1 (MQ=14) gcgcTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTGCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCt < 2:56932/251‑1 (MQ=14) gcTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGACAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTgg < 2:143656/251‑1 (MQ=14) ccACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTAACGGCGGTCACAAGGGGCTC‑AAACACCCAGGGGGCGCCACCTGCTGGGTtgt > 2:130472/1‑251 (MQ=11) ttGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTgtgag < 2:150696/249‑1 (MQ=31) ggtgATGCATGACTGGGGTGAAGGCGTAACAAGGTAACCGGAGGGGAACCTGCGGTTGGATCACCGCCTTACCTTAAAGAAGAGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TGGCGTAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACAGCCCTTTTACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTgtgagtga < 2:53472/250‑1 (MQ=11) gACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTg < 1:237128/251‑1 (MQ=31) aCTGTGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGTTTTGGGAGTGAAAGTCACCTGc < 2:32475/251‑1 (MQ=9) aCTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTTGTTTGTGAGTGAAAGTCACCTGc < 1:93998/251‑1 (MQ=14) aCTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGc < 1:44558/251‑1 (MQ=31) ggggTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCtt < 1:116806/251‑1 (MQ=14) gAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAatat < 1:100773/251‑1 (MQ=14) gAAGTCGTAACAAGATAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAACAGCAAGGCGTC‑TTGCGAAGCAGACTGCTACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCCCGGGGACGCCACTTGCTGGGTTTTGAGCGAAAGGCACCTGCCTTAatat > 1:183102/1‑251 (MQ=11) aaGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGACGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGCAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCATTTCACGGCGGAAACA‑GGGGAGCTAAACCCCAAGGGGCGGCCAGTCGCTGGTTGGGGAGAGAAAATGAGCTGCCTTAataac > 2:97061/1‑249 (MQ=11) aaCAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTAACTTAAAGAAGCGGTCTTTGCAGTGCTAACACAGATTGTCTGATAGAAAGGGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACTCCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCAACTTGCTGGTTTGGGAGTGAAAGTCACTTTCCTTAAGATCTC‑aaat < 2:43582/250‑2 (MQ=11) aaGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCACTTTCACGGCGGTAAAA‑GGGGGTCGAATCCCCTAGGGGACGGCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTc > 1:276703/1‑250 (MQ=9) aGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGGTCGAATCCCCCAGGGGACGCCACTTGCTGGTTTGTGAGGGAAAGACACCTGCCTTAATATCTC‑AAAACTCAt > 1:215259/1‑251 (MQ=9) aGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCAt < 1:204407/251‑1 (MQ=14) aCCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTg < 2:194926/251‑1 (MQ=31) cTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTCGGGGCCGCCACTTGCTGGTTTGTGTGAGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGGGATGTTTgcg > 2:48467/1‑249 (MQ=11) gCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTgaga < 1:97391/250‑1 (MQ=14) gCGGTTGGATCACCTCCTTACCTGAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATGCGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTgag < 2:185810/249‑1 (MQ=14) gTTGGATCGCCTCCTTACCTTAAAGAAGCGTTCGTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTTATTCGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCTCCCTTTCACGGCGTTAACA‑GGGGTTCGAAGCCCCTAGGGGACGCCACTTGCTGGTTGGTGAGTGAAAGTCACCTGTCTTAATAGCGC‑AGAACTCATCTTCGGGTGATGGTTGAGATAtt < 2:39253/251‑1 (MQ=11) gTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGACGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACCCCGCCCTTTCACGGCGGTAACA‑GGGGGTCGAATCCCCTCGGGGCCCCCCCTTGCTGGTTTTTGGGTGAAAGTCACCTCCCTTAATATCTCCAAAAC‑CCTCTTCGGGGGGTGTTTggggtatt > 2:219077/1‑244 (MQ=11) gATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTGAGATATTTGct < 1:185817/251‑1 (MQ=31) cACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTGAGATATTTGctct < 2:3340/250‑1 (MQ=31) ccttaccttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTaaaa < 2:184089/251‑1 (MQ=31) ttaccttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGGAAAA‑GGGGGTCGAATCCCCTAGGGGCCGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGGGAGGTTTGAGTAATTTGCTCTTTaaaac > 1:235733/1‑249 (MQ=11) taccttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGGTCGAATACCCTAGGGGACGCCACTTGCTGGGTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATc > 1:60355/1‑251 (MQ=9) ttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATATTCGGGGGAGGTTTGAGATATTTGCTCTTTTAAAATCTgg > 2:14033/1‑250 (MQ=9) taAAGAAGCGTTCTTTGCAGTGCTCACACAGCTTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACCCCGCCCTTTCACGGCGGTAACA‑GGGGGTAGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGGGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTGTGATATTTGCTCTTTAAAAATCTGGAt > 1:276732/1‑251 (MQ=255) taAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑TGGGTGCGAATCCCCTAGGGTACGTCACGTGCTGGTGTGTGAGTGAAAGTCGCCTGCCTTAATATCTC‑AAAACGCATCTTCGGGTGAGGTTTGAGATATTTGCTCTTTAAAAATCTGGa < 1:40963/250‑1 (MQ=11) aagCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAAAA‑AGGGGTCGAAGTCCCTAGGGGACGCCACTTTCTGGGTTGTGAGTGGAAGTCAGCTGCCTTAAAAACTC‑AAAAATCATCTTCGGGGGATGTTTGAGATGTTTGCTCTTTAAAAATCTGGATTAAGc > 1:260418/1‑251 (MQ=11) gTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAATCTGaa < 1:74408/251‑1 (MQ=14) tCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGaaa < 1:4937/250‑1 (MQ=31) tttGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCACAGG‑ACACCGCCCTTTCACGGCGGAAACA‑GGGGTTCGAATCACCTAGGGGGCGCCACTTGCTGGGTTGTGGGTGAAAGGACCCTGCCTTAATTACTC‑AAAAATCATCTTCGGGGGATGTTTGCGATAATTGCTCTTTAAAAATTTTGATCAAGATGAAAAtt > 1:167625/1‑251 (MQ=11) gCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTc < 1:241397/161‑1 (MQ=17) gCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGGTCGAATCCCCTAGGGGACGCCCCTTGCTGGGTTGTGAGTGAAAGTc > 2:241397/1‑161 (MQ=255) tCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTTTGAGGGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTGAGATATTTTCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACtt > 1:253199/1‑249 (MQ=9) caccaaagtttgttgaaaaGAAAG‑GAAAAACAAGGGGTCCTTGCGA‑GCAGACTGGTACGTCCCCTTCCTCTAGAGGGCCAGGTAC‑CCGCCCTTTCACGGGTGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTg < 1:56655/231‑1 (MQ=11) acaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGCAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGACGCTTGCTGGTTTGTGAGTGAAAGCCACCTGCCTTAATATCTC‑AAAAATTATCTTCGGGTGGAGTTTTCGATCTTTTCTCTTTTAAAATCTGGATAAAGCTGAAAATTGGAacacagcaca > 1:183985/1‑244 (MQ=11) caGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGGTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTTTGAGGGAAAGGCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGGGGTGGTTGAGGTATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAAATGTAACACTGaacaac > 2:32617/1‑251 (MQ=11) gATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCCAGGGGACGCCACTTGCTGGGTTGTGAGGGAAAGTCACCCGCCTTAATATCTC‑AAAAATCATCTTCGGGGGATGTTTGAGATATTTGCTCTTTTAAAATCTGGATCAAGCTGGAAATTGAAAAAATGaaccacc > 2:264845/1‑246 (MQ=11) cTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGGTCCACTCCCCTAGGGGACGCCACTTGCTCGGTTGTGAGTGAAAGTCACCTCCCTTAATATCTC‑AAAAATCATCTTCGGGTGATGTTTGGGATATTTGCTCTTTAAAAATCTGGATCAAGCTAAAAAATGAAAAACTGAACAACGAGAgttg > 1:42311/1‑251 (MQ=11) aGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGACCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAGAGTTGTTCGt < 1:125593/251‑1 (MQ=14) aaaGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGa < 2:76325/251‑1 (MQ=11) aTACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCCCCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGTGGATGAATCGt < 2:102500/251‑1 (MQ=11) cccTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTTGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAAc < 2:216623/251‑1 (MQ=14) ccTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACa < 1:69582/251‑1 (MQ=31) tCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCGGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACAt < 1:122603/249‑1 (MQ=14) | CGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTC‑TTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGG‑ACACCGCCCTTTCACGGCGGTAACA‑GGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTC‑AAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACAT > NC_000913/4209546‑4210029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |