Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,942,765 Δ8 bp noncoding (70‑77/206 nt) gcvB → small regulatory RNA GcvB

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2942765 2942772 8 10 [0] [0] 10 gcvB small regulatory RNA GcvB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 29427640 (0.000)10 (0.390) 10/478 1.0 100% noncoding (69/206 nt) gcvB small regulatory RNA GcvB
?NC_000913 2942773 = 0 (0.000)noncoding (78/206 nt) gcvB small regulatory RNA GcvB

TTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCAT  >  NC_000913/2942542‑2942979
                                                                                                                                                                                                                                       |                                                                                                                                                                                                              
gtaaggcctttagcggtggtaatcgtttagacatggctattaaactttgatgttaaatgaatttaacaattagatcacactatgtaacctattagtttttttaatctgagccattataaattgtccgttgagcttctaccagcaaatacctatagtggcggcacttcctgagccggaacgaaaagttttatcggaatgcgtgttctggtgaacttttggcttacggttgtgTTGTTGTGTTTGCAATTGGt                                                                                                                                                                                             >  1:201432‑M2/232‑251 (MQ=255)
                                        taaactttgatgttaaatgaagttaacaattagatcacactatgtaacctagtagtttttttaatctgagtcattataaattgtccgttgagcttctaccagcaaattcctatagtggcggcacttcctgaggctgaacgaaaagtgttatcggaatgcttgttctggtgaacttttggcttacggttgtgTTGTGTTGTTTGCAATGGGTCTGCTATTCAGACTATGTTAGCAAATCTACCTTTTTTCa                                                                                                                                                      <  2:248955‑M2/59‑1 (MQ=255)
                                                       aatgaatttaacaattagatcacactatgtaacctattagtttttttaatctgagccattataaattgtccgttgagcttctaccagcaaatacctatagtggcggcacttcctgagccggaacgaaaagttttatcggaatgcgtgttctggtgaacttttggcttacggttgtgTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTAc                                                                                                                                      <  1:139380‑M2/75‑1 (MQ=255)
                                                                  caattagatcacactatgtcccctcttagtttttttaatctgagccattataaattgtccgttgagcttctaccagcaaatacctatagtggcggcacttcctgagccggaacgaaaagttttatcggcatgcgtgttctggtgaacttttggcttaaggttttgTTGTTGTGTTTGCACTTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCCCTTCCTGTCCATTTACCCTGTCTGTcc                                                                                                                           >  2:243075‑M2/166‑251 (MQ=255)
                                                                          tcacactatgtaacctattagtttttttaatctgagccattataaattgtccgttgagcttctaccagcaaatacctatagtggcggcacttcctgagccggaacgaaaagttttatcggaatgcgtgttctggtgaacttttggcttacggttgtgTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGAt                                                                                                                   >  2:188578‑M2/158‑251 (MQ=255)
                                                                                                  ttttaatctgagccattataaattgtccgttgagcttctaccagcaaatacctatagtggcggcacttcctgagccggaacgaaaagttttatcggaatgcgtgttctggtgaacttttggcttacggttgtgTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCg                                                                                            <  2:201432‑M2/117‑1 (MQ=255)
                                                                                                             gccattataaattgtccgttgagcttctaccagcaaatacctatagtggcggcacttcctgagccggaacgaaaagttttatcggaatgcgtgttctggtgaacttttggcttacggttgtgTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCtttttttt                                                                                <  2:92069‑M2/129‑1 (MQ=255)
                                                                                                                             cgttgagcttctaccagcaaatacctatagtggcggcacttcctgagccggaacgaaaagttttatcggaatgcgtgttctggtgaacttttggcttacggttgtgTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGa                                                                 >  1:190622‑M2/107‑250 (MQ=255)
                                                                                                                                                           gggcggcacttcctgagccggaacgaaaagttttatcggaatgcgtgttctggtgaacttttggcttacggttgtgTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCGTTCAc                                  <  2:153824‑M2/175‑1 (MQ=255)
                                                                                                                                                                                            tatcgtaatgcgtgttctggtgaacttttggctttcggttgttGTGTTGTGTTTGCTATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCGGTACATTTACCCTGTCTGTCCATAGTGAGTAATGTAGCACCGCCTAATTGCGTTGCTTTTTTTTTCCTTGCGATCGCGAATTTCTGATCCAGTTCGACCATCTCTTTCACGTCAGTACTGTTGAGCTTCTTTTTGTTGCCAt  <  2:254439‑M2/207‑1 (MQ=255)
                                                                                                                                                                                                                                       |                                                                                                                                                                                                              
TTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCAT  >  NC_000913/2942542‑2942979

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑