| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,655,795 | IS2 (–) +5 bp | intergenic (‑122/‑9) | ynfA ← / → ynfB | putative transporter YnfA/DUF1283 domain‑containing protein YnfB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1467910 = | NA (NA) | 14 (0.530) | 12/490 | 0.8 | 100% | noncoding (1331/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 1655799 | 0 (0.000) | intergenic (‑126/‑9) | ynfA/ynfB | putative transporter YnfA/DUF1283 domain‑containing protein YnfB | |||||
| * | ? | NC_000913 | = 1469240 | NA (NA) | 12 (0.460) | 11/486 | 0.9 | 100% | noncoding (1/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 1655795 = | 0 (0.000) | intergenic (‑122/‑13) | ynfA/ynfB | putative transporter YnfA/DUF1283 domain‑containing protein YnfB | |||||
GCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGGGCAGAAAGCATCCAATAATTTCACACAGCGCAGTAGCAAAAAATAGTAACGTTGTTTTAATCATCTTTGTCTCTTATTGACATCATGTATAGTTATAGGGCGACATAATATCATCAATATAAACACCCTCCTGGTACGTTTTGCGTCCGCAGTGGATGGTGTAGAATCACCTTTAATCATTCATACAGGGAATGAATTATGAAAATCACTCTCAGCAAACGAATCGGCCTGCTCGCTATTCTGCTGCCTTGCGCACTGGCATTGAGCACAACTGTTCATGCCGAAACTAACAAACTGGTGATTGAGTCTGGCGACAGTGCACAAAGCCGCCAGCACGCCGCTATGGAAAAAGAGCAATGGAATGACACGCGCAATCTGCGCCAGAAAGTGAATAAACGCACTGAAAAAGAGTGGGATAAAGCCGACGCCGCT > NC_000913/1655561‑1656041 | gccgGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGGGCAGAAAGCATCCAATAATTTCACACAGCGCAGTAGCAAAAAATAGTAACGGTGTTTTAATCATCTTTGTCTCTTATTGACAGCATGTATAGTTATAGGGCGACATAATATCATCAATATAAACACCCTCCTGGTACGTTTTGCGTCCGCAGTGTATGGTGTAGAATCACCGTTAATCATTCATACATGGtggatttgcccc > 2:168922‑M2/1‑239 (MQ=255) cAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGGGCAGAAAGCATCCAATAATTTCACACAGCGCAGTAGCAAAAAATAGTAACGTTGTTTTAATCATCTTTGTCTCTTATTGACATCATGTATAGTTATAGGGCGACATAATAGCATCAATATAAACACCCTCCTGGTACGTTTTGCGTCCGCAGTGGATGGTGTAGAATCACCTTTAAGCATTCATACAGGGtggatttgcccctatatttc > 1:139832‑M2/1‑231 (MQ=255) gCGTTTCGTTTTAACCACAACCAGGGCAGAAAGCATCCAATAATTTCACACAGCGCAGTAGCAAAAAATAGTAACGTTGTTTTAATCATCTTTGTCTCTTATTGACATCATGTATAGTTATAGGGCGACATAATATCATCAATATAAACACCCTCCTGGTACGTTTTGCGTCCGCAGTGGATGGTGTAGAATCACCTTTAATCATTCATACAGGGtggatttgcccctatatttccagacatctgttatca > 1:179460‑M2/1‑215 (MQ=255) aGCGCAGTAGCAAAAAATAGTAACGTTGTTTTAATCATCTTTGTCTCTTACTGACATCATGTATAGTTATAGGGCGACATAATATCATCAATATAAACCCCCTCCTGGTACGTTTTGCGTCCGCAGTGGATGGTTTAGAATCACCTTTAATCATTCATACAGGGttgatttgcccctatatttccagacatcttgtatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgagaa > 1:263555‑M2/1‑164 (MQ=255) gTAGCACAAAATAGTAACGTTGTTTTAATCATCTTTGTCTCTTATTGACATCATGTATAGTTATAGGGCGACATAATATCATCAATATAAACACCCTCCTGGTACGTTTTGCGTCCGCAGTGGATGGAGTAGAATCACCTTTAATCATTCATACAGGGtggatttgcacctatatttccagccatctgttatcacttaacccattacaagcccgctgccgcagctattcccgtgcagcgcaataaccc < 2:216696‑M2/248‑91 (MQ=255) atcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGGGAATGAATTATGAAAATCACTCTCAGCAAACGAATCGGCCTGCTCGCTATTCTGCTGCCTTGCGCACTGGCATTGAGCACAACTGTTCATGCCGAAACt > 1:70146‑M2/148‑250 (MQ=255) cttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGGGAATGAATTATGAAAATCACTCTCAGCAAACGAATCGGCCTGCTCGCTATTCTGCTGCCTTGCGCACTGGCATTGAGCACAACTGTTCATGCCGAAACTAAc > 1:194652‑M2/146‑251 (MQ=255) aaTAGTAACGTTGGTTTAATCATCTTTGTCTCTTATTGACATCATGTATAGTTATAGGGCGACATAATATCAGCAATATAAACCCCCTCCTGGTACGTTTTGCGTCCGCAGTGGATGGTGTAGAATCACCTTTAATCATTCATACAGGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgc > 2:273254‑M2/1‑149 (MQ=255) gttgttCTAATCATCTTTGTCTCTTATTGACATCATGTATAGTTATAGGGCGACATAATATCATCAATATAAACACCCTCCTGGTACGTTTTGCGTCCGCAGTGGATGGTGTAGAATCACCTTTAATCATTCATACAGGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccat < 1:76732‑M2/251‑112 (MQ=255) tcTTTGTCTCTTATTGACATCATGTATAGTTATAGGGCGACATAATATCATCAATATAAACACCCTCCTGGTACGTTTTGCGTCCGCAGTGGATGGTGTAGAATCACCTTTAATCATTCATACAGGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgct < 2:104895‑M2/251‑125 (MQ=255) gcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGGGAATGAATTATGAAAATCACTCTCAGCAAACGAATCGGCCTGCTCGCTATTCTGCTGCCTTGCGCACTGGCATTGAGCACAACTGTTCATGCCGAAACTAACAAACTGGTGATTGAGTCTGGCGAc < 1:104719‑M2/130‑1 (MQ=255) attaTCGACCTCATGTATAGTTATAGGGCGACATAATATCATCAATATAAACACCATCATGGTACGTTGTGCGTCCTCAGTGGATGGTGTAGAATCACCTTTAATCATTCATACAGGGtggatttgcccctatatttccagacatctgttatcacttaacccattaaaagcccgctgccgcagatattcccgaggcgagcgataacccagcgcaatatgcggatgccattcgttataatgctctcacgact < 2:925‑M2/250‑134 (MQ=255) taGGGCGACATAATATCATCAATATAAACACCCTCCTGGTACGTTTTGCGTCCGCAGTGGATGGTGTAGAATCACCTTTAATCATTCATACAGGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgtt < 2:145291‑M2/251‑157 (MQ=255) aagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGGGAATGAATTATGAAAATCACTCTCAGCAAACGAATCGGCCTGCTCGCTATTCTGCTGCCTTGCGCACTGGCATTGAGCACAACTGTTCATGCCGAAACTAACAAACTGGTGATTGAGTCTGGCGACAGTGCACAAAGCCGCCAGCACGCCGCTATGGAAAAAGAGCAATGGAATGACACGCGCAATCTgc > 1:114971‑M2/58‑251 (MQ=255) agactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGGGAATGAATTATGAAAATCACTCTCAGCAAACGAATCGGCCTGCTCGCTATTCTGCTGCCTTGCGCACTGGCATTGAGCACAACTGTTCATGCCGAAACTAACAAACTGGTGATTGAGTCTGGCGACAGAGCACAAAGCCGCCAGCACGCCGCTATGGAAAAAGAGCAATGGAATGACACGCGCAATCTgcg > 1:123268‑M2/57‑251 (MQ=255) ggTACGTTTTGCGTCCGCAGTGGATGGTGTAGAATCACCTTTAATCATTCATACAGGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcac < 1:170122‑M2/251‑194 (MQ=255) cacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGGGAATGAATTATGAAAATCACTCTCAGCAAACGAACCGGCCTGCTCGCTATTCTGCTGCCGTGCGCACTGGAATTGAGCACAACTGTTCATGCCGAAACTAACAAACTGGGGATTTAGTCGGGCGAAAGTGCACAAAGCCGCCAGCACGCCGCTATGGAAAAAGAGCAATGGAATGACACGCGCAATCTGCGCCAGaaa < 2:111130‑M2/202‑1 (MQ=255) ttaagtgatattggttgtctggagattcagggggccagtctaCAGGGAATGAATTATGAAAATCACTCTCAGCAAACGAATCGGCCTGCTCGCTATTCTGCTGCCTTGCGCACTGGCATTGAGCACAACTGTTCATGCCGAAACTAACAAACTGGTGATTGAGTCTGGCGACAGTGCACAAAGCCGCCAGCACGCCGCTATGGAAAAAGAGCAATGGAATGACACGCGCAATCTGCGCCAGAAAGTGAAt > 1:187741‑M2/43‑250 (MQ=255) tggttgtctggagattcagggggccagtctaCAGGGAATGAATTATGAAAATCACTCTCAGCAAACGAATCGGCCTGCTCGCTATTCTGCTGCCTTGCGCACTGGCATTGAGCACAACTGTTCATGCCGAAACTAACAAACTGGTGATTGAGTCTGGCGACAGTGCACAAAGCCGCCAGCACGCCGCTATGGAAAAAGAGCAATGGAATGACACGCGCAATCTGCGCCAGAAAGTGAATAAACGCACTGa > 1:1166‑M2/32‑250 (MQ=255) cACCTTTAATCATTCATACAGGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccg > 1:44191‑M2/1‑23 (MQ=255) aCCTTTAATCATTCATACAGGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgt < 1:235726‑M2/251‑230 (MQ=255) cagggggccagtctaCAGGGAATGAATTATGAAAATCTCGCTCAGCAAACGAATCGGCCTGCTCGCTATTCTGCTGCCTTGCGCACTGGCATTGAGCACAACTGTTCATGCCGAAACTAACAAACTGGTGATTGAGTCTGGCGACAGTGCACAAAGCCGCCAGCACGCCGCTATGGAAAAAGAGCAATGGAATGACACGCGCAATCTGCGCCAGAAAGTGAATAAACGCACTGAAAAAGAGTGGGATAAAg < 1:164694‑M2/236‑1 (MQ=255) gggccagtctaCAGGGAATGAATTATGAAAATCACTCTCAGCAAACGAATCGGCATGCTCGCTATTCTGCTGCCTTGCGCAATGGCATTGAGCACAACTGTTCATGCCGAAACTAACAAACTGGTGATTGAGTCTGGCGACAGTGCACAAAGCCGCCAGCACGCCGCTATGGAAAAAGAGCAATGGAATGACACGAGCAATCTGCGCCAGAAAGAGAATAAACGCACTGAAAAAGAGTGGGATAAAGCCg > 2:88237‑M2/12‑250 (MQ=255) ggccagtctaCAGGGAATAAATTAGGAAATTCCCTCTCAGCTAACGAATTGGCCTGCTCGCTATTCGGCGGCCTTGCGCACTGTCATTGAGAACAACTGTTCATGCCGAAACTAACAAACTGGTGATTGAGCCTGGCGACAGTGCCCAAAACCGCCATCACGCTGTTATGGAAAAAGAGCAATGGAATGACGCGCGCAATCTGCGCCAGAAAGTGAATAAACGTACTGAAAAAGAGTGGGATAaagcctac < 2:274912‑M2/241‑4 (MQ=255) tctaCAGGGAATGCATTGTGCAAATCACTCTCAGCAAACGAATCGGCCTGCTCGCTATTCTGATGCCTTGCGCACTGGCATTGAGCACAACTGTTCATGCCGAAACTAACAAACTGGTGATTGAGTCTGGCGCCAGTGCACAAAGCCGCCAGCACGCCGCTATGGAAAAAGAGCAATGGAATGACACGCGCAATCTGCGCCAGAAAGTGAATAACAGCCCTGCAACAGAGTGGGATAACGCCGACGCCGCt > 2:126066‑M2/5‑251 (MQ=255) | GCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGGGCAGAAAGCATCCAATAATTTCACACAGCGCAGTAGCAAAAAATAGTAACGTTGTTTTAATCATCTTTGTCTCTTATTGACATCATGTATAGTTATAGGGCGACATAATATCATCAATATAAACACCCTCCTGGTACGTTTTGCGTCCGCAGTGGATGGTGTAGAATCACCTTTAATCATTCATACAGGGAATGAATTATGAAAATCACTCTCAGCAAACGAATCGGCCTGCTCGCTATTCTGCTGCCTTGCGCACTGGCATTGAGCACAACTGTTCATGCCGAAACTAACAAACTGGTGATTGAGTCTGGCGACAGTGCACAAAGCCGCCAGCACGCCGCTATGGAAAAAGAGCAATGGAATGACACGCGCAATCTGCGCCAGAAAGTGAATAAACGCACTGAAAAAGAGTGGGATAAAGCCGACGCCGCT > NC_000913/1655561‑1656041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |