| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,938,725 | IS5 (–) +4 bp | coding (499‑502/993 nt) | rbsR → | DNA‑binding transcriptional dual regulator RbsR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 37 (1.390) | 36/490 | 0.1 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3938728 | 0 (0.000) | coding (502/993 nt) | rbsR | DNA‑binding transcriptional dual regulator RbsR | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 34 (1.290) | 28/488 | 0.1 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 3938725 = | 0 (0.000) | coding (499/993 nt) | rbsR | DNA‑binding transcriptional dual regulator RbsR | |||||
GGTTTCCAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGAGTCAGTTTTTAAAAACTGTTTAAAGAAATGCACAAGTATTGTGATTGATTTTTTAGTTGTTTTTCTTGATGAGAAGCTG > NC_000913/2289869‑2290334 | ggTTTCCAGCGGATAAGGGCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACg < 2:145937/251‑1 (MQ=17) cggttacgggcGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGAGTCCTCCCTCCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTCCTGCTGAATTCTCTGTCAGCGAAGGTAAGTTGATGACTCATGATGATCCCTGTTCTATGGCTCCAGATTACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTTCATAACGCTGTAGcca < 2:193712/241‑1 (MQ=11) ggCCATTACCAGCCTTGGGGTAAAACGGCTCGACGACTTCCCACATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGACAATATCTTTTCTGGTCTAAAGGCCCTTACTGATGAATTCACTGTCCGCCAAAGAAAGTTGATGACTCATGATGAAACCTGTTCTATGACTCCAGATGACAAACAAGATCACATCTCAGGGCCTTGTTCGCACCTTCCATAACGCTATAGCCACCAGAACAGATAtt > 1:264282/1‑251 (MQ=14) cAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACg > 2:203172/1‑250 (MQ=255) tAAAACGGCTCGATGACTTACACAATGTTTTTCCATGGCAGAATCTGATCAATGCGGGACAAGAAAATATCTTTTCTGGTCTGACGGAGCTTACTGCAGAATTCACAGACGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTAAGGCTCCAGATGAAAAAAATGATCTCATATCAGGGACTTGTCCGCCCCTTCCCTAACGTTGTAGACACCCGAACAGATATTTCGGAAGGGCAAAGAGAAAc > 2:198781/1‑251 (MQ=14) aCTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATATCTTTTCTGGTCTGACGGCGCTTCCTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGACCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGCTATTGCGGAACGACAAAGAGAACCAGAACCAGATTGATg > 2:236640/1‑251 (MQ=255) cccaTGTTTTGCCATGGAATAATCTGCGCCATGCGGGACAAGTAAATCGCTTTTCTGGTCTGACGGCGCTTACTGCAGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTGCTTTGTCACCAGATTACAAACATGATCTAATATCAGGGACTTGTTCGCACCTTCAATAACGCTATAGCCACAAGAACAGATAGTGAGGAACGACAATGAGAAACAGAACCAGATTGATGCATTGa < 2:210471/250‑1 (MQ=17) cATGGCAGAATCTGCTTCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGGTTACTGCTGCATTTACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGGTCGCATCTTCTATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGCCAAAGAGAAACAGAACCAGATTGAGGCATTGAGCTGTCATCCTa < 2:243407/251‑1 (MQ=18) gcgccATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTAGGAAATGAATTGc < 2:244513/248‑1 (MQ=255) gggACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTAGGAAATTAATTGCTGTTAAAAg < 2:108455/251‑1 (MQ=255) aaGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTTCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCTCCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCATATTGAGGCATTGAGCTTGCATCCTATGGAATGAATTGCTGTTAAAAGCATTg < 2:244193/251‑1 (MQ=21) gcgcTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCAt < 1:203172/251‑1 (MQ=255) cACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAATCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGAGTCAGttttt < 1:234416/251‑1 (MQ=255) aaGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCAGATCAGGGACTTGTTCGCACGTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGTCAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAATGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGAGTCAGTTTTTAAAAACTGttt < 2:94373/251‑1 (MQ=255) tAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGccacc < 1:63689/101‑1 (MQ=255) tAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGccacc > 2:63689/1‑101 (MQ=255) cTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGAGTCAGTTTTTAAAAACTGTTTAAAGAAATGCACAAGAATTg‑gattggtt > 1:147938/1‑248 (MQ=255) cTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGACCGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGAGTCAGTTTTTAAAAACTGTTTAAAGAAATGCACAAGTATTGTGATTGATTTTTTAgttgt > 1:104858/1‑251 (MQ=255) cATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTAAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGAGTCAGTTTTTAAAAACTGTTTAAAGAAATGCACAAGTATTGTGATTGATTTTTTAGTGGTTTTTCTTGATGAGAAGCTg < 2:233638/248‑1 (MQ=255) | GGTTTCCAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGAGTCAGTTTTTAAAAACTGTTTAAAGAAATGCACAAGTATTGTGATTGATTTTTTAGTTGTTTTTCTTGATGAGAAGCTG > NC_000913/2289869‑2290334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |