| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 663,262 | IS2 (–) +5 bp | coding (698‑702/1212 nt) | dacA ← | D‑alanyl‑D‑alanine carboxypeptidase DacA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 663262 = | 0 (0.000) | 13 (0.490) | 13/490 | 0.8 | 100% | coding (702/1212 nt) | dacA | D‑alanyl‑D‑alanine carboxypeptidase DacA |
| ? | NC_000913 | = 1469240 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 663266 | 0 (0.000) | 24 (0.900) | 22/490 | 0.3 | 100% | coding (698/1212 nt) | dacA | D‑alanyl‑D‑alanine carboxypeptidase DacA |
| ? | NC_000913 | 1467910 = | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
AAACCGGTTCAGAGGCGAACTCTTTACCTACTTTCAGTGGGTTAACGGTTTCAAAGAAACGGAAGCCCCAGGTTAGCAGTTTTTTACTTTCGGCTTCACGGCCTTTAAAAGTACGTCCGCCCATTACCGCAGAAATCAAGCGCATCTGGCCTTCAGTCGCAGAAGCAACAAGGTTGTAACCTGCTTTGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATCCCATAACAGGCCGTTACGGTTCAGCTGGCGAATACCGTTAAACGTAAATTCTTTTTCTTTATAGATCGAGTATTCATTCGGTACGTCACGGATCAATGCCTGGCCGATCAGCGCCATATCTCGCGCGGAGCTGTACTGACCATCAGCATCCAGACCATGTACCGTCTGGAAGTGGGTATTTTTCAGGCCCAGTGCGTTAACGTAGCTGTTCATCAAGCCAACAAAAGCGTCCTGGCTACCAGCG > NC_000913/663036‑663511 | aaaccGGTTCGGAGGCGAACTCTTTACCTACTTTCAGTGGGTTAACGGTTTCAAAGAAACGGAAGCCCCAGGTTAGCAGTTTTTTACTTTCGGCTTCACGGCCTTTAAAAGTACGTCCGCCCATTACCGCAGAAATCAAGCGCATCTGGCCTTCAGTCGCAGAAGCAACAAGGTTGTAACCTGCTTTGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATtggatttgcccctatatttc > 1:204377‑M1/1‑231 (MQ=255) ctacaccatgttgacgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaaatagtattaagaatatcactcatttaagtgatattggttgtctggagattcagggggccaggctaGTTATCCCATCACAGGCCGTTACGGTTCAGCTGGCg < 2:219191‑M1/36‑1 (MQ=255) gttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATCCCATAACAGGCCGTTACGGTTCAGCTGGCGAATACCGtt > 1:206961‑M1/207‑251 (MQ=255) catccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATCCCATAACAGGCCGTTACGGTTCAGCTGGCGAATACCGTTAAACGTAAATTCTTTTTCTTtata > 2:87862‑M1/182‑250 (MQ=255) catccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATCCCATAACAGGCCGTTACGGTTCAGCTGGCGAATACCGTTAAACGTAAATTCTTTTTCTTtat < 2:34865‑M1/68‑1 (MQ=255) aGCCCCAGGTTAGCAGTTTTTTACTTTCGGCTTCACGGCCTTTAAAAGTACGTCCGCCCATTACCGCAGAAATCAAGCGCATCTGGCCTTCAGTCGCAGAAGCAACAAGGTTGTAACCTGCTTTGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcg < 1:159510‑M1/251‑84 (MQ=255) aGCCCCAGGTTAGCAGTTTTTTACTTTCGGCTTCACGGCCTTTAAAAGTACGTCCGCCCATTACCGCAGAAATCAAGCGCATCTGGCCTTCAGTCGCAGAAGCAACAAGGTTGTAACCTGCTTTGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATtggat > 1:28307‑M1/1‑168 (MQ=255) aGCCCCAGGTTAGCAGTTTTTTACTTTCGGCTTCACGGCCTTTAAAAGTACGTCCGCCCATTACCGCAGAAATCAAGCGCATCTGGCCTTCAGTCGCAGAAGCAACAAGGTTGTAACCTGCTTTGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATtggat < 2:28307‑M1/173‑6 (MQ=255) ccAGGTTAGCAGTTTTTTACTTTCGGCTTCACGGCCTTTAAAAGTACGTCCGCCCATTACCGCAGAAATCAAGCGCATCTGGCCTTCAGTCGCAGAAGCAACAAGGTTGTAACCTGCTTTGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgata > 1:55563‑M1/1‑164 (MQ=255) gTTAGCAGTTTTTTACTTTCGGCTTCACGGCCTTTAAAAGTACGTCCGCCCATTACCGCAGAAATCAAGCGCATCTGGCCTTCAGTCGCAGAAGCAACAAGGTTGTAACCTGCTTTGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgatcaccc > 2:261364‑M1/1‑160 (MQ=255) tAGCAGTTTTTTACTTTCGGCTTCACGGCCTTTAAAAGTACGTCCGCCCATTACCGCAGAAATCAAGCGCATCTGGCCTTCAGTCGCAGAAGCAACAAGGTTGTAACCTGCTTTGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccag < 2:204377‑M1/250‑93 (MQ=255) gCAGTTTTTTGCTTTCGGCTTCACGGCCTTTAAAAGTACGTCCGCCCATTACCGCAGAAATCAAGCGCATCTGGCCTTCAGTCGCAGAAGCAACAAGGTTGTAACCTGCTTTGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattccaagcccgctgccgcagatattcccgtggcgagcgataacccagcgc < 2:50582‑M1/251‑96 (MQ=255) gtttttaCTTTCGGCTTCACGGCCTTTAAAAGTACGTCCGCCCATTACCGCAGAAATCAAGCGCATCTGGCCTTCAGTCGCAGAAGCAACAAGGTTGTAACCTGCTTTGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcacta < 1:120618‑M1/250‑100 (MQ=255) ctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATCCCATAACAGGCCGTTACGGTTCAGCTGGCGAATACCGTTAAACGTAAATTCTTTTTCTTTATAGATAGAGTATTCATTCGGTACGTCACGGATCAATGCCTGGCCg < 2:267508‑M1/112‑1 (MQ=255) gtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTACCCCATAACAGGCCGTTACGGTTCAGCTGGCGAATACCGTTAAACGTAAATTCTTTGTCTTTATATATCGAGTATTCATTCGGTACGTCACGGATCAATGCCTGGCCGATc > 1:266044‑M1/136‑250 (MQ=255) aaaGTCCGTCCGCCCATTACCGCAGAAATCCAGCGCATCTGGCCTTCAGTCGCAGAAGCAACAAGGTTGTAACCTGCTTTGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcg > 2:218082‑M1/1‑124 (MQ=255) aCGTCCGCCCATTACCGCAGAAATCAAGCGCATCTGGCCTTCAGTCGCAGAAGCAACAAGGTTGTAACCTGCTTTGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccagtcgttataatgctcgaacgcc < 1:192129‑M1/251‑133 (MQ=255) tCCGCCCATTACCGCAGAAATCAAGCGCATCTGGCCTTCAGTCGCAGAAGCAACAAGGTTGTAACCTGCTTTGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctct > 1:211511‑M1/1‑116 (MQ=255) cccATTCCCGAAGTAATAAACCGCATCTGGATTTCAGTCGCAGAAGCAACACGGTTGTACCCTGCTTTGTCAGTGCGTCCGGATTTGATGCCGTCGACATTCAGGCTGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattaccagcccgctgccgcagatattcccgtggcgcgcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgca > 2:172215‑M1/1‑112 (MQ=255) gCAGAAATCAAGCGCATCTGGCCGTCAGTCGCAGAAGCAACAAGGTTGTATCCTGCTTTGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgccgccgcagatattcccgtggcgagcgatatcccagcgcactatgcggatgccattcgttataatgctcgaacgccgctgcaaggttctttg < 2:32942‑M1/251‑149 (MQ=255) aaTCAAGCGCATCTGGCCTTCAGTCGCAGAAGCAACAAGGTTGTAACCTGCTTTGTCAGTGTGTCCGGTGTTGATGCCGTCGACATTCAGGCTGTTATtggatttgcccctatagttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgcc < 1:97665‑M1/251‑154 (MQ=255) tctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATCCCATAACAGGCCGTTACGGTTCAGCTGGCGAATACCGTTAAACGTAAATTCTTTTTCTTTATAGATCGAGTATTCATTCGGTACGTCACGGATCAATGCCTGGCCGATCAGCGCCATATCTCGCGCGGAGCTGTACTGACCATCAGCATcc < 2:198164‑M1/157‑1 (MQ=255) ccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATCCCATAACAGGCCGTTACGGTTCAGCTGGCGAATACCGTTAAACGTAAATTCTTTTTCTTTATAGATCGAGTATTCATTCGGTACGTCACGGATCAATGCCTGGCCGATCAGCGCCATATCTCGCGCGGAGCTGTACTGACCATCAGCATCCAGACCATg > 1:59377‑M1/85‑249 (MQ=255) gtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATCCCATAACAGGCCGTTACGGTTCAGCTGGCGAATACCGTTAAACGTAAATTCTTTTTCTTTATAGATCGAGTATTCATTCGGTACGTCACGGATCAATGCCTGGCCGATCAGCGCCATATCTCGCGCGGAGCTGTACTGACCATCAGCATCCATACCATGTACCGTCTGGAAGTGGGTAttttt > 1:249137‑M1/63‑251 (MQ=255) caacaaGGTTGTAACCTGCTTTGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgcc < 2:96876‑M1/219‑154 (MQ=255) caacaaGGTTGTAACCTGCTTTGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgcc > 1:96876‑M1/1‑66 (MQ=255) ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATCCCATAACAGGCCGTTACGGTTCAGCTGGCGAATACCGTTAAACGTAAATTCTTTTTCTTTATAGATCGAGTATTCATTCGGTACGTCACGGATCAATGCCTGGCCGATCAGCGCCATATCTCGCGCGGAGCTGTACTGACCATCAGCATCCAGACCATGTACCGTCTGGAAGTGGGTATTTTTc < 1:117205‑M1/190‑1 (MQ=255) tttgtcggtggtgccggttttgatgccgTCGACATTCAAGCGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgcggccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcga < 2:233779‑M1/161‑128 (MQ=255) tttGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGATGTTATtgcatttgcccctatatttccaaacatctgttatcatttaacccattaccagcccgatgccgaagatattcccgtggcgcgcgataacccagcgcacaatgcggatgccattcgttataatgctcga > 1:233779‑M1/1‑47 (MQ=255) tGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttt < 1:18155‑M1/250‑206 (MQ=255) gTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATtggatttgccccgatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgtttt < 2:55563‑M1/250‑207 (MQ=255) tattggttgtctggagattcagggggccagtctaGTTATCCCATAACAGGCCGTTACGGTTCAGCTGGCGAATACCGTTAAACGTAAATTCTTTTTCTTTATAGATCGAGTATTCATTCGGTACGTCACGGATCAATGCCTGGCCGATCAGCGCCATATCTCGCGCGGAGCTGTACTGACCATCAGCATCCAGACCATGTACCGTCTGGAAGTGGGTATTTTTCAGGCCCAGTGCGTTAACGTAGCTGTtc < 1:142568‑M1/217‑1 (MQ=255) tggttgtctggagattcagggggccagtctaGTTATCCCATAACAGGCCGTTACGGTTCAGCTGGCGAATACCGTTAAACGTAAATTCTTTTTCTTTATAGATCGAGTATTCATTCGGTACGTCACGGATCAATGCCTGGCCGATCCGCGCCATATCTCGCGCGGAGCTGTACTGACCATCAGCATCCAGACCATGTACCGTCTGGAAGTGGGTATTTTTCAGGCCCAGTACGTTAACGAAGCTGTtcatc < 2:147349‑M1/220‑1 (MQ=255) gctgtcgaaatccatgctgttattggatttgcccctatatttccagacatctgttatcacttatcccattacaatcccgcggccgcagatatttccgtggtgagcgataatccagcgccctatgcggatgccattcgttataatgctcgaacgcctcctcaaggttctttgctgccggtaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattcc < 1:200687‑M1/235‑228 (MQ=255) agggggccagtctaGTTATCCCATAACAGGCCGTTACGGTTCAGCTGGCGAATACCGTTAAACGTAAATTCTTTTTCTTTATAGATCGAGTATTCATTCGGTACGTCACGGATCAATGCCTGGCCGATCAGCGCCATATCTCGCGCGGAGCTGTACTGACCATCAGCATCCAGACCATGTACCGTCTGGAAGTGGGTATTTTTCAGGCCCAGTGCGTTAACGTAGCTGTTCATCAAGCCAACAAAAGCGTc > 1:53938‑M1/15‑251 (MQ=255) gACATTCAGGCTGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttactc > 1:117600‑M1/1‑17 (MQ=255) gTTATtggatttgcccctatattaacagacctctgttatcacttaaccgattacaagcccgctgacgcagatattcccgtggcgagcgataacccagcgcactatgcggatgacattcgttataatgctcgaacgcctctgcaaggttctttgctgacgttaacccgtctgttttgggcgtgatactgctgtagtcacgttttatcgttttcacgaagctctctgctattccgtacctctccggacgcac > 2:210241‑M1/1‑5 (MQ=255) | AAACCGGTTCAGAGGCGAACTCTTTACCTACTTTCAGTGGGTTAACGGTTTCAAAGAAACGGAAGCCCCAGGTTAGCAGTTTTTTACTTTCGGCTTCACGGCCTTTAAAAGTACGTCCGCCCATTACCGCAGAAATCAAGCGCATCTGGCCTTCAGTCGCAGAAGCAACAAGGTTGTAACCTGCTTTGTCAGTGTGTCCGGTTTTGATGCCGTCGACATTCAGGCTGTTATCCCATAACAGGCCGTTACGGTTCAGCTGGCGAATACCGTTAAACGTAAATTCTTTTTCTTTATAGATCGAGTATTCATTCGGTACGTCACGGATCAATGCCTGGCCGATCAGCGCCATATCTCGCGCGGAGCTGTACTGACCATCAGCATCCAGACCATGTACCGTCTGGAAGTGGGTATTTTTCAGGCCCAGTGCGTTAACGTAGCTGTTCATCAAGCCAACAAAAGCGTCCTGGCTACCAGCG > NC_000913/663036‑663511 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |