New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 603799 | 0 (0.000) | 16 (0.600) | 15/490 | 0.6 | 100% | coding (865/1248 nt) | ybdG | miniconductance mechanosensitive channel YbdG |
? | NC_000913 | 3720633 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region |
AAACCGTTATCACCTGGAGCCAGTTGGCGTACCATTAAGGTCATATCTTTACGAATCCGCGGATGGTTACGCAGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/603588‑603799 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTTGGTGTCCCCCGAACCCAGGTCAGGACATGGGTTGCCCTCTATGAAAAACATGGAGAAAAAGGTTTAATTCCCAAACCTAAAGGCGTTAGTGCTGATCC > NC_000913/3720633‑3720873 AAACCGTTATCACCTGGAGCCAGTTGGCGTACCATTAAGGTCATATCTTTACGAATCCGCGGATGGTTACGCAGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT > 2:71821/1‑249 cCCTGGAGCCAGTTGGCGTACCATTAAGGTCATATCTTTACGAATCCGCGGATGGTTACGCAGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATG < 1:239034/250‑1 gGGAGCCAGTTTGCGTACCATTAAGGTCATATCCTTACGAATCCGCGGATGGTTACGCAGATATTCGTTCAGATAGGCACGAAAAGTTCCAATATTGTTCAGTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACACATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTGTAACAAATGTGTACTGCACCCATTTTGTGGGACGATGAAATGGAATAGCCCCTAATgtggat < 2:55096/250‑7 GGAGCCAGTTGGCGTACCATTAAGGTCATATCTTTACGAATCCGCGGATGGTTACGCAGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCA > 1:183803/1‑250 GAGCCAGTTGGCGTACCATTAAGGTCATATCTATACGAATCCGAGGATGGTTACGCAGATATTCGTTCCGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAACTAAGGCTTTAACAAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAA > 1:161981/1‑250 GCGTACCATTAAGGTCATATCTTTACGAATCCGCGGATGGTTACGCAGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATAC < 1:192513/251‑1 ATGGTTACGCAGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTAC > 2:143854/1‑251 GGTTACGCAGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTT > 1:240543/1‑251 ATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGG > 2:115759/1‑251 GTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCAC < 1:115759/251‑1 CATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTTGATGTCCC < 1:71821/250‑1 GATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGACCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTTGGTGTCCCCCGAACCCAGGTAAGGCCATGGGTTGCCCTCTATGAAAAACATGG > 1:88784/1‑251 GGTTAAATAAGGCTTTAACAAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTTGGTGTCCCCCGAACCCAGGTCAGGACATGGGTTGCCCTCTATGAAAAACATGGAGAAAAAGGTTTAATTCCCAAACCTAAAGGC < 2:32033/251‑1 AATAAGGCTTTAACAAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATGCCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACGTGATCATCGCGGCACGTTTTGGTGTCCCCCGAACCCAGGTCAGGACATGGTTTGCCCTCTATGAAAAACATGGAGAAAAAGGTTTAATTCCCAAACCTAAAGGCGTTAG < 1:83220/251‑1 TTTAACAAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCATAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGACGTGAATAACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTTGGTGTCCCCCGAACCCAGGTCAGGACATGGGTTGCCCTCTATGAAAAACATGGAGAAAAAGGTTTAATTCCCAAACCTAAAGGCGTTAGTGCTGATC > 1:113891/1‑251 TAACAAATGTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTTGGTGTCCCCCGAACCCAGGTCAGGACATGGGTTGCCCTCTATGAAAAACATGGAGAAAAAGGTTTAATTCCCAAACCTAAAGGCGTTAGTGCTGATCC > 2:164128/1‑250 AAACCGTTATCACCTGGAGCCAGTTGGCGTACCATTAAGGTCATATCTTTACGAATCCGCGGATGGTTACGCAGATATTCGTTCAGATAGGCACGAAAGGTTCCAATATTGGTCATTCGGCGCAGATTTAATACCGACTCCGTAGAACCTTGCTGGCGATTCCACTCATTAATTTCCTGATGGCGGCTGGTTAAATAAGGCTTTAACAAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/603588‑603799 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTTGGTGTCCCCCGAACCCAGGTCAGGACATGGGTTGCCCTCTATGAAAAACATGGAGAAAAAGGTTTAATTCCCAAACCTAAAGGCGTTAGTGCTGATCC > NC_000913/3720633‑3720873 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |