Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,682,515 C→T M311I (ATG→ATA dctA ← C4 dicarboxylate/orotate:H(+) symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,682,5150CT100.0% 122.2 / NA 35M311I (ATG→ATAdctAC4 dicarboxylate/orotate:H(+) symporter
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (20/15);  total (20/15)

GCCGTTACCGACCAGGTTAGTCAGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCCATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTCGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACA  >  NC_000913/3682272‑3682753
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                              
tccGTTACCGACCAGGTTAGTCAGCGCACGAGCTTCTGACATACAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGGCGCCGCCAACACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAACAGCAACACGATTAACAGCGTGATTTGGTGGCCGATATCCATATGACTGTAAGTGGCCTGGGAGATAAACACCACCGCTATTgcac                                                                                                                                                                                                                                         >  2:254839/2‑248 (MQ=255)
   gTTACCGACCAGGTTAGTAAGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAACAACACGATTAAAAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCTCTTGTCAgg                                                                                                                                                                                                                                       >  2:12208/1‑250 (MQ=255)
            cAGGTTAGTCAGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGCATATCgctg                                                                                                                                                                                                                             >  2:103632/1‑248 (MQ=255)
                       gcgcACGAGCTTCTGACAAAAAGCGGTCGATACGGAGGAACAGCCCCACCCCCTCTACCGGCAAAGGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGAAAAAGCCACTCCCCGTTCCCCCTGCCTCCCCTTTAGAAAAAAGCAGCAACACGATAAACAGCGTTATTTGGGGGACGATATCCATCGGACTGTTAGGGGCCGGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAgg                                                                                                                                                                                                                  <  1:365479/251‑1 (MQ=255)
                                               ggacGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGCGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCACCTTTAGAAGAAAGCAGCCACACGATTAACAGCTTGATTTGGTGGACGATATACATCTGACTGTTACTGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGTATAACGATGTGCCATCCAGGTTAAACGAGTAGCATGTCgggga                                                                                                                                                                                           >  2:229037/4‑248 (MQ=255)
                                                  cGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGAcc                                                                                                                                                                                       >  1:299889/1‑251 (MQ=255)
                                                        cgggggaccagccccacccccgccccGGCAAAAGGCCCCACCGCAGTGAGCGCCCCCGCAAGCACGAAAAACCCCCCCCCCATTCCCCCTCCCCCCCTTTAAAAAAAAAGCAGCACCACGATAAACAGCGTGATTTGGTGGACGATATCTATCTGACTTTGGGGGGCCGGGGCAAAAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGccc                                                                                                                                                                                  <  2:358178/227‑1 (MQ=255)
                                                              ccagcccccgccccGCTACCGGCAAAGGGCCCCCCGCAGAGAGCGTCCCCGCCAGCACAATAAAGCCCCTACCCGTTACCCCGGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTGGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCTATAACCACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCaccacc                                                                                                                                                                           <  1:42628/240‑1 (MQ=255)
                                                                   gcCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTAGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGAttt                                                                                                                                                                      >  1:416407/1‑251 (MQ=255)
                                                                    ccAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGTTGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGCCCAGCCCCACCCCCGAtttt                                                                                                                                                                     >  2:89032/1‑250 (MQ=255)
                                                                       acccccgcacacgacaaTGGCCCCCCCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCCCTCCCCGTTCCCCCTGCCGCCCCTTAAGAAAAAAGCAGCAACACGATTAACAGCTTGTTTTGGTGGACGATACCCATCTGCCTGTTAGGGGCCTGGGGGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACg                                                                                                                                                                   <  2:149809/236‑1 (MQ=255)
                                                                                           cccccccGCAGAGAGCGTCGCCGCAAGCACGATAAAGCCCCTCCCCGTTCCCCCTGCCGCCCCTTTAAAAAAAAGCACCAACACGATTAACAGCGTGATTTGGTGGAAGATATCCATCTTACTGTTAGTGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCt                                                                                                                                               <  1:395167/246‑1 (MQ=255)
                                                                                                 cGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGAGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCg                                                                                                                                          >  1:431646/1‑250 (MQ=255)
                                                                                                    cAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGCTTTACGGCAGCCGAGTTTCTCCATCTTGTCgcgc                                                                                                                                       >  2:361933/1‑248 (MQ=255)
                                                                                                           cGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATAcgcg                                                                                                                                >  2:151559/1‑251 (MQ=255)
                                                                                                                  cccAGCACTATAAACCCCCTCCCTGTTCCCCCCGCCCCCCCTTAAGAAAAAAGCAGCAACACGATTACCAGCGTGATTGGGTGGACGATTTCCTTCTGACTGTTAGTGGCCGGGGAGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAgcgc                                                                                                                         <  1:270351/250‑1 (MQ=255)
                                                                                                                   ccagccggATAAAGCCACTCCCCGTTCCCCCTGCCCCCCCTTTAGAAAAAAGCAGCAACACGATTAACAGCGTGATTTGGGGGACGATATCCATCTGACTGTTAGTGGCCGGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGcc                                                                                                                        <  1:151130/244‑1 (MQ=255)
                                                                                                                        acaaTAAAGCCACTCCCCTTTCCCCCTGCCCCCCCTTTAGAAAAAAGCAGCAACACGATTAACAGCGTGTTTTGGTGGACAATATCCATCTGCCTTTTAGTGGCCGGGGCGAAAACCACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTc                                                                                                                   <  1:314943/248‑1 (MQ=255)
                                                                                                                        aCGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATGTCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTc                                                                                                                   >  1:247005/1‑251 (MQ=255)
                                                                                                                          gATAAAGCCACTACCCGTTACCACTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATGTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTCgg                                                                                                                 >  2:75278/1‑251 (MQ=255)
                                                                                                                               agcccctccccGTTCCCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACCGCGGTTTTTGGTGGACGATATCCTTTTGCGTGGTAGTGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTCGGAAGAt                                                                                                            <  1:12208/243‑1 (MQ=255)
                                                                                                                                   aCTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTCGGAAGATGa                                                                                                          >  1:271029/1‑249 (MQ=255)
                                                                                                                                      ccccGTTCCCCCTCCCGCCCCTTGAGAAGAAAGCAGCAACCCGATTAACAGCGTGATTGGGTGGACGATATCCATCGGACTGTTAGGGGCCGGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTCGGAAGATGAAGTc                                                                                                      <  1:69039/249‑1 (MQ=255)
                                                                                                                                            tACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGCGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTCGGAAGATGAAGTCCCCAGt                                                                                                >  1:166563/1‑250 (MQ=255)
                                                                                                                                                             tAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTCGGAAGATGAAGTCCCCAGTACAATCAGCAGttcttc                                                                               >  1:238244/1‑250 (MQ=255)
                                                                                                                                                                              agcGATGAACAGTGTGATGTGGGTGAAGATATCCATCTGATGGTTAGGGCCCGGGGAAATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTCGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATaa                                                              <  2:183081/249‑1 (MQ=255)
                                                                                                                                                                                cGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGGATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTCGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAAt                                                            >  1:318447/1‑251 (MQ=255)
                                                                                                                                                                                            tGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTCGGAAGATGACGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGAAAAATTTGAAGATACTg                                                >  2:78479/1‑251 (MQ=255)
                                                                                                                                                                                              aTTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGCATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTCGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGa                                               >  1:380916/1‑250 (MQ=255)
                                                                                                                                                                                                  ggtgcaagattgtcgtctggtttttAGGGGCCTGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTCGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAAcc                                           <  2:247005/227‑1 (MQ=255)
                                                                                                                                                                                                     ggACGATATCCATCTGACTGTTAGAGGCCTGGGCGATAAACACCGCCACTATTGTCAGGTATATCGATGTGCCATCACGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCAGACTCGGAAGATGAAGTCCCCCGTAAAATCAGCAGCTCTTCAAGGATTTAGCGGATAATGTTGAAGATACTGAAACCTGTc                                       >  2:18558/1‑251 (MQ=255)
                                                                                                                                                                                                                        gTTAGGGGCCGGGGCGATAAACACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTCGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAAccc                     <  1:361933/250‑1 (MQ=255)
                                                                                                                                                                                                                         ttAGTAGCCTGGGCGATAATCACCGACGCTATTGTCAGGTCTATCGTTTTGCCCTCAAGGATAAAAGAGAAGACTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGATTCTCCATCTTGTCGCGCATACGCGGCAACGCAGACTCGGAAGATGAAATCCCCAGTACACTAAGCAGTTCATCACGGATGTAGCGGATAAATTTGCAGATACTGAAAACAGTAGCTTTCGCGTTTGAAcaca                    >  2:372812/1‑247 (MQ=255)
                                                                                                                                                                                                                               gccggggCGATAAACCCCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTCGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAg             <  1:227109/247‑1 (MQ=255)
                                                                                                                                                                                                                                          aaaCACCGCCGCTATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTCGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACa  <  1:256807/251‑1 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                              
GCCGTTACCGACCAGGTTAGTCAGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAAACACCGCCGCCATTGTCAGGTATATCGATGTGCCATCAAGGTTAAACGAGTAGCCTGTCGGGATGACCAGCCCCACCACCGATTTACGGCAGCCGAGTTTCTCCATCTTGTCGAGCATACGCGGCAGCGCCGACTCGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACA  >  NC_000913/3682272‑3682753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: