Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 690,948 | G→A | V279V (GTC→GTT) | ybeX ← | CorC‑HlyC family protein YbeX |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 690,948 | 0 | G | A | 94.1% | 104.4 / ‑5.1 | 35 | V279V (GTC→GTT) | ybeX | CorC‑HlyC family protein YbeX |
Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (20/12); total (22/13) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GCCAATAGCGGCAGACTGGAGTGGACGGCGGTTAAAGGTCAACGCCTGAAGCCCCATCAGCGAAATAATCGCCGCAGGCCAGACGTCGTAAGGAGAGAAGGCCAGCGTTCCGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTGACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCATCGCTAAAGTGGGTGCCGAACGCTTCGTTGAAGTCTTCAATGGAAGCCAGTGCGCGTACGGTCCAGGTATGACGACTCAGCTGACGGAAGTCGATATCATCTTCTTC > NC_000913/690702‑691193 | gCCAATAGCGGCAGACTGGAGTGGACGGCGGTTAAAGGTCAACGCCTGAAGCCCCATCAGCGAAATAATCGCCGCAGGCCAGACGTCGTAAGGAGAGAAGGCCAGCGTTCCGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACAt > 1:91179/1‑251 (MQ=255) caaaaagaggCAGACTGGAGTGGACGGCGGTTAAAGGTCAACGCCCGACGCCCCATCAGCGGAATAATCGCCGCCGGCCAGACGACGTAAGGAGAGAAAGCCAGCGCTCCGCAGGCACAGAATAATAACCCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGGAGGTATCTATCCAGTTTCGGTTTTATTCATCCAGCGTAGGCTGGGGTGAGTCATCCGGGATTTTAACATg > 2:256681/9‑251 (MQ=255) aGACTGGAGTGGACGGCGGTTAAAGGTCAACGCCTGAAGCCCCATCAGCGAAATAATCGCCGCAGGCCAGACGTCGTAAGGAGAGAAGGCCAGCGTTCCGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGaata > 1:237014/1‑250 (MQ=255) gAGTGGACGGCGGTTAAAGGTCAACGCCTGAAGCCCCATCAGCGAAATAATCGCCGCAGGCCAGACGTCGTAAGGAGAGAAGGCCAGCGTTCCGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGAATAATACGcc < 2:110387/251‑1 (MQ=255) ccTGAAGCCCCATCAGCGAAATAATCGCCGCAGGCCAGACGTCGTAAGGAGAGAAGGCCAGCGTTCCGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAAc < 2:73780/251‑1 (MQ=255) tGAAGCCCCATCAGCGAAATAATCGCCGCAGGCCAGACGTCGTAAGGAGAGAAGGCCAGCGTTCCGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTg > 1:132396/1‑251 (MQ=255) gAAATAATCGCCGCAGGCCAGACGTCGTAAGGAGAGAAGGCCAGCGTTCCGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTGTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACGTTGAACTGGTAACCggcgatgtc < 1:367558/251‑1 (MQ=255) aatCGCCGCAGGCCAGACGTCGTAAGGAGAGAAGGCCAGCGTTCCGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTGTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATa < 1:258995/250‑1 (MQ=255) aGACGTAGTAAGGAGAGCAGGACAGCAATCCGCCGGCCCCGCATAATAACGACCGCAGCAGGCGAACGCGCTGGCGTTCAATTCATGAGGCCAAACCCATGTAGTTATCTATCCAGTTTAGGTTTTATTCATCCAACTTCGGCTGGGGTGACTCATCCGGGCTTTTCACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCCTCGATGTCGCTAGTTTCGCAACGCGcc > 2:183224/1‑251 (MQ=255) gACGTCGTAAGGAGAGAAGGCCAGCGTTCCGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCg > 1:15789/1‑251 (MQ=255) tagtAAGGAGAGCAGGCCAGCGTTCAGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGACTAATACGCCGACTGTCGGCCATCGCCACTTTGCACTGGTAACCGACGATGTCGATAGTTTCGCCACGCGCCGGa > 2:6580/3‑249 (MQ=255) ggaaGGAGAGAAGGCCAGCGTTCCGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGAGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGAATAATACGCCGACGGTCGTTCATCGCCTCTTTGAACTGGTATCCGTCGATGTCGATAGGTTCGCCACGCGCCGGAAGAt < 2:247882/249‑1 (MQ=255) ccGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCAcaag < 1:76216/251‑4 (MQ=255) ccAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACCACCGATAGTGTCGActtct < 1:134566/251‑1 (MQ=255) cTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCATCGCTAAAGTGGGTGc > 1:40142/1‑251 (MQ=255) tgCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATTCCTGCATCACCAGACCACCGATAGTGTCGACCTCTGCATCGCTATAGTGGGTgacg > 2:25800/2‑248 (MQ=255) cAATTAATGAGGCAAAAGACATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCACGCTGCGGCTGGGGTGAGTCCTCCAGGATTTTAACATGATCCTGCATAATACGCCGACTGTCAGACATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCCCGAGCCGAAAGATGCACAAATGCACGCATCACCAGCCCACAGATAGTGTCGACTTCTTCATCGCTAAAGTGGGTGACGACCGCt > 2:376129/1‑251 (MQ=255) aTTAATAAGGCAAATGCCATGTAGTTATCTAGCCAGTTGCGGTTTTATTCATCCAGCGTCGGCTGGGGGGAGGCATCCGGGATTTTAACATGAACCTCAATAATACGCCGACTGGCGGCCATCGCCACTTTGAACTGGGAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGTATCACCAGACCACCGATAGTGTCGACTTCTTCATCGCTAAAGTGGGTGCCGTACGCTTc < 2:433073/251‑1 (MQ=255) tAATGAGGCAAAAGCCATGTAGTTATCTATCAAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAAACTGACTAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACCACCGATCGTGTCGACTTCTTCATCGCTAAAGTGGGTGCCGAACGCTTCGt > 2:31869/1‑251 (MQ=255) tGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCAAAATGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCATCGCTAAAGTGGGTGCCGCACGCTTCGTTgc > 2:108508/1‑250 (MQ=255) aaaaGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCATCGCTAAAGTGGGTGCCGAACGCTTCGTTGAAGTCtt > 1:335401/1‑251 (MQ=255) agccatggaggaatctatcCAGTTTCGGTGTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCTCAAATGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCATAGCTAAAGTGGGTGCCGAACGCTTCGTTGAAGTCTTCa > 2:96873/13‑250 (MQ=255) cATGTAGTTATATATCCAGATTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACAACCGATAGTGTCGACTTCTTCATCGCTAAAGTGGGTGCCGAACGCTTCGTTGAAGTCTTCAATgg > 2:208407/1‑251 (MQ=255) aGTTATCTATCCAGTTTCGGTATTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGATCCTGAATAATACGCCGACTGTCGGGCAGCGCCACTTTGAAGTGGTAACCGTCGATGGCGATAGTTTCGCGACGCGTCGGAAGATTCCCAGATGCCGGCAGCACCAGATCACCGATAGTGTCGACTTCTTCATCGCTAAAGGGGGTTCCGAACGCTTCGTTGAAGTCTTCAATGGAAGc < 1:193886/250‑1 (MQ=255) ctatcCAGGTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGCACATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCATCGCTAAATTGGGTGCCGAACGCTTCGTTGAAGACTTCAATGTGATCCAGTgcg > 2:274439/1‑251 (MQ=255) tcCAGTTTCGGTTTTATTCATCCCGCTTCGACTGGGGTGAGTCATCCGGGATTTTGACATGAACCTGACTAATACGCCGCCTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCATCGCTAAAGTGGGTGCCGAACGCTTCGTTGAAGTCtt > 1:381806/1‑231 (MQ=255) tcCAGTTTCGGTTGTATTCAGCCAGCGTCGGCTGGGGTGAGTCATCCGGGATTTGGACATGAGCCTGAATAATACGCCGACTGTCGGCCATCGCCTCTGTGAACTGGTAACCGGCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCAGCACCAGACCACCGATAGTGTCGACTTCTGCATCGCTAAAGTGGGTGCCGAACGCTTCGTTGAAGTCtg < 2:381806/231‑2 (MQ=255) ccAGTGTCGGTTTGATTCCTCCAGCTTCGGCTGAGGTGAGTCAGCCGGGATTTTAACAGGAACATGAAAAATACGCCGACTGTCGGCCAGCGCCACTTTGAACAGGTAACCGTCGAGGTCGATAGTTTCGCCACGCGCCGGAAGAGGCCCAAATGCCTGCATCACCAGACCACCGATATTGTCGACTTCTTCATCGCTAAAGTGGGTGCAGAACGCTGCGTTAAAGTCTTCAATGGAAGCCAGTGCGCGTa < 2:13371/251‑1 (MQ=255) aTTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCATCGCTAAAGTGGGTGCCGAACGCTTCGTTGAAGTCTTCAATGGAAGCCAGTGCGCGTACGGTCCAGGTATg > 1:24917/1‑250 (MQ=255) gCTGGGGTGAGTCATCCGGGATTTTAACATGAACCTGCATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCTTGCATCACCAGACCACCGATAGTGTCGACTTCTTCATCGCTAAAGTGGGTGCCGAACGCTTCGTTGAAGTCTTCACTGGAAGCCAGTGCGCGTACGGTCCAGGTATGACGACTCAGCTGACgg > 1:50640/1‑251 (MQ=255) gTCATCCGGGATTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCATCGCTAAAGTGGGTGCCGAACGCTTCGTTGAAGTCTTCAATGGAAGCCAGTGCGCGTACGGTCCAGGTATGACGACTCAGCTGACGGAAGTCGatat > 1:54261/1‑251 (MQ=255) aTCCGGGATTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCCTCACCAGACCACCGATAGTGTCGACTTCTTCCTCGCTAAAGTGGGTGCCGAACGCTTCGTTGAAGTCTTCAATGGAAGCCAGTGCGCGTCCGGTCCAGGTATGACGACTCAGCTGACGGAAGTCGATatcat > 2:422637/1‑251 (MQ=255) aTTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCCTCGCTAAAGTGGGTGCCGAACGCTTCGTTGAAGTCTTCAATGGAAGCCAGTGCGCGTACGGTCCAGGTATGACGACTCAGCTGACGGAAGTCGATATCATCttattc > 2:149993/1‑251 (MQ=255) aTTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCATCGCTAAAGTGGGTGCCGAACGCTTCGTTGAAGTCTTCAATGGAAGCCAGTGCGCGTACGGTCCAGGTATGACGACTCAGCTGACGGAAGTCGATATCATCttcttc < 1:31869/251‑1 (MQ=255) aTTTTAACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCATCGCTAAAGTGGGTGCCGAACGCTTCGTTGAAGTCTTCAATGGAAGCCAGTGCGCGTACGGTCCAGGTATGACGACTCAGCTGACGGAAGTCGATATCATCttcttc < 1:229315/251‑1 (MQ=255) | GCCAATAGCGGCAGACTGGAGTGGACGGCGGTTAAAGGTCAACGCCTGAAGCCCCATCAGCGAAATAATCGCCGCAGGCCAGACGTCGTAAGGAGAGAAGGCCAGCGTTCCGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTGACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCATCGCTAAAGTGGGTGCCGAACGCTTCGTTGAAGTCTTCAATGGAAGCCAGTGCGCGTACGGTCCAGGTATGACGACTCAGCTGACGGAAGTCGATATCATCTTCTTC > NC_000913/690702‑691193 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |