New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3823093	52 (1.270)	3 (0.070)	3/484	3.1	4.4%	coding (694/2109 nt)	spoT	bifunctional (p)ppGpp synthase/hydrolase SpoT
	?	NC_000913	3823465 =	78 (1.930)					coding (1066/2109 nt)	spoT	bifunctional (p)ppGpp synthase/hydrolase SpoT
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCAC  >  NC_000913/3822844‑3823341                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                         tCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGTAATTTATAGCCCGCTGCCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGCAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCATTATCGCGTAATCAAAGACGTGGTGAAAGCCGCGCGCGGCAACCGTAACGCGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGTGAATACCGTGccc                                                                                                                                                                                                                                                         >  2:187654/1‑250 (MQ=255)  cACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCcgc                                                                                                                                                                                                                                                        >  1:68955/1‑251 (MQ=255)      tCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTc                                                                                                                                                                                                                                                     <  1:153687/250‑1 (MQ=255)      tCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAAGCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTc                                                                                                                                                                                                                                                     <  2:91015/250‑1 (MQ=255)            ggACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACAGTTTAGGTATCAACCACATTAAAACCGAACTCGCAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTATGAAATCGCAGGGCGATTGCATGAAGCGCGAATACCGTGCCGCGTCCGTggac                                                                                                                                                                                                                                              >  2:332362/1‑249 (MQ=255)                      cgccgcATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGTCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCa                                                                                                                                                                                                                                    <  1:407855/251‑1 (MQ=255)                      cgccgcATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGc                                                                                                                                                                                                                                     <  1:327412/250‑1 (MQ=255)                        ccgcATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGGCAGTGGTCGCGAGAAGCAtt                                                                                                                                                                                                                                  >  2:249873/1‑250 (MQ=255)                            aTCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGCTTATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCAGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATAttt                                                                                                                                                                                                                               >  2:296081/1‑250 (MQ=255)                             tCGCACGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCAACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCACCCGTACAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCGTTGGTCGTGGGAAGCATCttttt                                                                                                                                                                                                                             >  2:319142/1‑249 (MQ=255)                              cGCCCGTCCAACTCTCGAAATTTATAGCACGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGCACTCGAAGCGCTGGGATTTGAGGCGCTGTATCCCACCCGTTATCGCGTACTCAACGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAACATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGCCAGTGGTCGCGAGAAGCATCTTTAtt                                                                                                                                                                                                                            >  2:385067/1‑251 (MQ=255)                                     gAAACTCTCGAAATTTATATCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTa                                                                                                                                                                                                                     <  1:252262/251‑1 (MQ=255)                                     gAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGCCGCTGTATCCCAAACGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGAGGAAATACCGTGCCGCGTCAGTGGACACGAGACGCATCTTTATTCGAttt                                                                                                                                                                                                                      >  1:266897/1‑250 (MQ=255)                                                     ataGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCATAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTc                                                                                                                                                                                                     >  1:233986/1‑251 (MQ=255)                                                         cccGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTGTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAag                                                                                                                                                                                                 <  2:68955/251‑1 (MQ=255)                                                           cGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAagag                                                                                                                                                                                               <  1:327379/251‑1 (MQ=255)                                                               ggCGCACCGTTTAGGTATCCACCACATTAAAACCGTGCTCTAAGAGCTGGGTGTTGAGGCGCTGTATCTCAAGCGTTATCGCGTAAACAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGGAAAGGGATGATCCAGAAGATGCTCTCTGAAACCGATGGTCGTGTGCAGGAAGCGGGAAGAGCGTTCCGCGTCAGTGGTGTCGAGAATCATCTATAGTCGGTTGACTTCAATGTGTTGCTCAAAGagca                                                                                                                                                                                             <  2:22023/249‑1 (MQ=255)                                                               ggCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCATGAAGCGGGAATACCGTTCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGagcagc                                                                                                                                                                                           <  2:15197/251‑1 (MQ=255)                                                                    aCCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGtttt                                                                                                                                                                                      >  1:15176/1‑251 (MQ=255)                                                                             gTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATc                                                                                                                                                                             >  1:42665/1‑251 (MQ=255)                                                                                                  aaCTCGAAGAGCTGGGTTTTAAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAACGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGAGGTCGCGCGAAGCATCTTTATTCGATTTACTGCAAAATGGGGCTCAAAGAGCAGCGTTTTTACTCGATCATGTACATCTACGCTTTCcgc                                                                                                                                                        >  2:438929/1‑251 (MQ=255)                                                                                                             cTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCa                                                                                                                                              >  1:372966/1‑250 (MQ=255)                                                                                                                      gAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGAACCAGAAGATTCTTTCTGAAAGCGAAGGGCGTTTGCAGGAAGCGGGAATTCCGTGCCGCGTTAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATTGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTCCGCCTTCCGCGTGATCGTCAATGATTCTg                                                                                                                                     <  1:359486/250‑1 (MQ=255)                                                                                                                                  cccAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATc                                                                                                                         <  1:156623/250‑1 (MQ=255)                                                                                                                                        cGTTAGCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCt                                                                                                                  <  2:372966/251‑1 (MQ=255)                                                                                                                                             tCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCCTCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGcc                                                                                                             >  2:245032/1‑251 (MQ=255)                                                                                                                                                 ggaaTCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTAGCGCGTGCTGGGcc                                                                                                             >  2:159546/3‑247 (MQ=255)                                                                                                                                                 gTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGAt                                                                                                         <  1:353191/251‑1 (MQ=255)                                                                                                                                                  tAATCAAAGAAGGGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATg                                                                                                        >  1:141645/1‑251 (MQ=255)                                                                                                                                                    agcAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTTAAGAGCTGATCCAGAAGATTCTTACTGAAAGCGAAGGGCGTTTGTATGAAGCGGGAATACCGTGCCGCTTCAGTGGTCGCGAGAAGCATCGTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTGTTACGCGATCATGGACTTCTGCGCTTTCCGCGTGAGCGTCAATGATTCGGACACCTGGTATCGCGTGCTGGGCCAGATGca                                                                                                      <  2:246857/249‑1 (MQ=255)                                                                                                                                                        aagaagCGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGc                                                                                                  >  1:117168/1‑251 (MQ=255)                                                                                                                                                           aagTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGCTGATCCAGAAGCTTCTTTCTGCAATCGACGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCACAATGGTGCTCAACGAGAAGCGTTTTTACTCGATCATGGACCTCTACGCTTTACGCGTGATCGTCAATGATTCTGACTACTGTTATCGCGTGCTGGGCCAGATGCACAGCCTg                                                                                               >  2:340539/1‑251 (MQ=255)                                                                                                                                                             gtattgAAATCCGCGCGCGTCAACCGTAAAGAGATGATCCAGAAGAGTCTTTCTGAAATCGAAGGGCGGTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTGCCGCGGGTTCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTa                                                                                             <  2:59248/247‑1 (MQ=255)                                                                                                                                                              tggtgAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTAc                                                                                            >  1:406414/1‑251 (MQ=255)                                                                                                                                                                   aaaGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTACTGGGCCAGATGCACAGCCTGTACAAGcc                                                                                       <  1:226399/251‑1 (MQ=255)                                                                                                                                                                            cgtggCAAACGTAAAGAGATGAACCAAAAGATTCTTCCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAAGGGTGCTCAAAGAGCAGGGTTTTTACTCGATCATGGACATCTACGCTTGCCGCGTGATCGTCAATGATTCTGACCCCTGTTATCGCGTGCGGGGCCTGATGCACCGCCTGTACAAGCCGCGTCCggg                                                                              <  2:99343/248‑1 (MQ=255)                                                                                                                                                                                 cAACAGTAAAGAGATGAGCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGATCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAAATGCACAGCCTGTACAAGCCGCGTCCGTGCcgcg                                                                         <  2:137701/251‑1 (MQ=255)                                                                                                                                                                                        aaaGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGCAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGaa                                                                     >  2:198307/1‑248 (MQ=255)                                                                                                                                                                                           gagaTGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTAAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACta                                                               <  1:187654/251‑1 (MQ=255)                                                                                                                                                                                             gatgatCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGAGACCTGTTATCGCGTGCTGGTCCAGATGCACAGCGGGTACAAGCCGCGTCCGGGCCGCGTGAAATACtata                                                             <  1:385067/251‑1 (MQ=255)                                                                                                                                                                                               tgatcacgacacttctttctGACCTCGAAGGGCGAATGCCGAAAGCGGGCATACCGTCACGCGACAGTGGAAGCCAGCACCATATTTATACGATATACTGCAAAATGGTGCTCAAAGAGCAGCGTCTTTACTCCATCATGGACATCTCCGCTTTCCGCGAGCTAGTCAATGATTATGCCACCTGTAATCGCGTGCTGGGCCCGCTGCACAGCCTGTACAAGCGGCGACCGGGCCGCGTGAAAGACTATATc                                                           >  2:178858/13‑251 (MQ=255)                                                                                                                                                                                                  tCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGcc                                                        >  1:410928/1‑251 (MQ=255)                                                                                                                                                                                                         gaTTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCaa                                                 <  1:89945/251‑1 (MQ=255)                                                                                                                                                                                                              cttctGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCg                                            >  1:95766/2‑251 (MQ=255)                                                                                                                                                                                                               ttctGCAATCGAAGGGCGTTTGCAGGAAGCGGCAATCCCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTCTTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATACACAGCTTGAACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCCTTCCAAAAGCg                                            >  1:251885/1‑250 (MQ=255)                                                                                                                                                                                                                tctGAAAGCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCGGCGTCGGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGTGTTTTGACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCGGACACCTGTTATCGCGTGCTGGGCCAGATGTACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGTCTATATCGCCATTCCAAAAGCGa                                           <  2:97032/250‑1 (MQ=255)                                                                                                                                                                                                                 ctGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAAc                                         >  1:59804/1‑251 (MQ=255)                                                                                                                                                                                                                 ctGAAATCGAAGCGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGacc                                         >  2:133068/1‑249 (MQ=255)                                                                                                                                                                                                                             ggCGTTTGCAGGAAGCGGGCATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGCACGGCTATCAGTCt                             >  1:252774/1‑251 (MQ=255)                                                                                                                                                                                                                                    gCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTAGATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGcaca                      <  1:416434/251‑1 (MQ=255)                                                                                                                                                                                                                                      aGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACAcc                    >  1:14033/1‑251 (MQ=255)                                                                                                                                                                                                                                          aGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCg                 >  2:161302/1‑250 (MQ=255)                                                                                                                                                                                                                                                        gCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTTACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCAc  >  1:366561/1‑251 (MQ=255)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                         TCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCAC  >  NC_000913/3822844‑3823341

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.