| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,938,725 | IS5 (–) +4 bp | coding (499‑502/993 nt) | rbsR → | DNA‑binding transcriptional dual regulator RbsR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 43 (1.050) | 42/490 | 0.1 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3938728 | 0 (0.000) | coding (502/993 nt) | rbsR | DNA‑binding transcriptional dual regulator RbsR | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 46 (1.130) | 39/488 | 0.2 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 3938725 = | 0 (0.000) | coding (499/993 nt) | rbsR | DNA‑binding transcriptional dual regulator RbsR | |||||
AATTTGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAA > NC_000913/2288676‑2289160 | aaTTTGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTTATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCAGCAACTTTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTg < 2:376649/251‑1 (MQ=255) aCCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATAATCAACAGTTGATGCCCATGCTCTGGGTGAATATAAGGAAGGTGCGAATAAGc > 1:134087/1‑251 (MQ=255) tAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCGTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAAt < 2:319927/250‑1 (MQ=255) gcCATTTATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGtcat > 1:123314/1‑251 (MQ=255) tCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGGTTTCTTTTTTCCGGACAAAATCATCAACTGACTCACCATACTCAACAGTTAATGCAAATGCTATTGGTGAATATAAGGCAGGTGCGAAAAAACGGGGAAATTTTTCTAGGCTAGCT‑CAGGcatttcatttttt > 1:179594/1‑248 (MQ=255) aTGTACTCATCCCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTAGATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGTCATTTCATTTCTTCAt < 2:109931/251‑1 (MQ=255) aCCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGTCATTTCATTTCTTCATGTTTGAGcc < 1:420627/250‑1 (MQ=255) ccGTTAATTTCAGTATTATTACTTACTCCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGTCATTTCATTTCTTCATGTTTGAGCCGAtt < 2:117709/249‑1 (MQ=255) aaTTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCCGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCCTACTCAACCGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGTCATTTCATTTCTTTATGTTTGAGCCGATTTTTTCTCCCGTAAAATACTTGAATCACCCTAt > 2:366190/1‑251 (MQ=37) ttCGTACTATTGGCGGTCCCCTAAACCAGCTGGATATCTTTTTCCAGGACCACACCATCAACTGTCTCACCATACTCAACAATTGATGCCCATGCTATGGGTGAATATCAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGTCATTTCCTTTCTTTATGTTTTAGCCGATTTTTTCTCCCGTAAATTCCTTAAAACAGCCTATTTTGACCGTTTCTTCGCCATTTTATGCGTTATcccc > 1:112580/1‑251 (MQ=21) tattatTGGCGGTCCCATAAACCAGCTGGGAATCTTTTTCCTGGACAACACCATACACTGTCTCACCATACTCAACAGTTGATGCCAAAGCTATGGGGGAATATAAGGAAGGTGCGAATAAGCGGGGGAATTCTTCTCTGGTGACT‑CAGGCATTTCATTTTTTCATGTTTGAGCCGCTTTTTTCTCCCGTAAATGACTTGAAACAGCCTATTTAAACCGTTTTTTTGCCATTTAAGGGGTTTTCCCCAGtt > 2:80170/1‑251 (MQ=255) tGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCATCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAg < 2:134340/250‑1 (MQ=255) ggTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGACATTTAAGGCGTTATCCCCAGTTTTTAGTgcgg > 2:5398/1‑248 (MQ=255) ggTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACAACCTCAACTGTATCACCATACTCAACAGTTGCTCCCAACGCTCTGGGTGAATATAAGGCAGGTGCGAATAAGCGAGGAAATTCTTCTCGGCTGACT‑CCGTCATTTCATTTCTTCATGTTTGCGCCGATTTTTTATCCCGTACATGCCTTGATTCAGCCTATTTAGACCGTTTCTTCGCCTTTTAAGGCGTTATCCCCAGTTTTTAGTg > 2:195340/1‑248 (MQ=255) tCCCATAAACCAGCTGGATATCTTTTTCCACGAACACAACATCCACTGTCTAACCATACTCAACAGTTGCTGCCAATGCAATGGGTGAATCTAAGGAAGGTGCGAACAAGCGGGGAAATTCTTCTCAGCTGACTACA‑TCCTTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGAAATTTACGGCGTTATCCCCAGTTTTTAgcg > 1:35726/1‑244 (MQ=17) aaCCAGCTGGATATCTTTCTCCAGGACAACACCATCAACTGGCTCACCATACTCAACAGTTGAGGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGTCAGTTCATTTCTGCATGTTTGAGCCGATTTTTGCTCCCGGAAATGCCTTGAATCAGCCTATTTAGACCGTTTCCTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCa < 2:153216/251‑1 (MQ=18) ggACAACACCATCAACTGTCTCGCCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACG‑CAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTTCGccc < 2:245532/251‑1 (MQ=255) tCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTg > 1:149702/1‑251 (MQ=255) aaCTGTTTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATCTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGTCATTTCATTTCTTCATGTTTGCGCCGATTTTTTCTCCCGTAAATGCCTTGCATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATATCTCACACTGACGTATCATTTGGTCCACCCGAAACCGGTTGGc > 1:120360/1‑251 (MQ=17) gTCTCACCATACTCAACAGTTGATGCCAATGCTAGGGGTGAATATAAGGAATGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGTCATTGCATTTCTTCATGTTTGAGCCGATGTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGCCCGTTTCTTCGTCATGTAAGTCGTTATCTCCAGTTTTTAGTGAGAGCTCTCCCACTGACGTATCATTTGGTCCTCCCGAAACATGTTGGCCa < 2:239397/249‑1 (MQ=17) cTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACAt > 1:111702/1‑251 (MQ=255) cAACAGTTGATGCCAATGCTATGGGGGAATATAAGGAAGGTGCGAATAAGCGGGGCAATTCTTCTCGGCTGACT‑CAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCg > 2:372273/1‑251 (MQ=255) aCAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGcc > 2:320903/1‑251 (MQ=255) cAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGTCATTTCATGTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCa < 2:134087/251‑1 (MQ=255) gAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCaa < 1:427574/250‑1 (MQ=32) | AATTTGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT‑CAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAA > NC_000913/2288676‑2289160 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |