Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,907,165	IS150 (–) +4 bp :: +CA	intergenic (‑105/+58)	rlmA ← / ← cspC	23S rRNA m(1)G745 methyltransferase/transcription antiterminator and regulator of mRNA stability CspC

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1907165 =	0 (0.000)	31 (0.770) +TG	29/486	0.4	100%	intergenic (‑105/+61)	rlmA/cspC	23S rRNA m(1)G745 methyltransferase/transcription antiterminator and regulator of mRNA stability CspC
	?	NC_000913	3720633 =	NA (NA)					noncoding (1/1443 nt)	IS150	repeat region
*	?	NC_000913	= 1907168	0 (0.000)	20 (0.490)	17/486	1.0	100%	intergenic (‑108/+58)	rlmA/cspC	23S rRNA m(1)G745 methyltransferase/transcription antiterminator and regulator of mRNA stability CspC
	?	NC_000913	= 3722075	NA (NA)					noncoding (1443/1443 nt)	IS150	repeat region

GGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCA  >  NC_000913/1906918‑1907408                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                    ggATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCAtt                                                                                                                                                                                                                                                  >  1:47516/1‑251 (MQ=255)       gatcagcactaacgcctttaggtttgggaattaaacctttttctccatgtttttcatagagggcaacccatgtcctgacctgggttcgggggacaccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcctcgtccaacaaaatgggtgcagtacacaCATTcgacg                                                                                                                                                                                                                                             <  1:384480‑M1/9‑1 (MQ=255)       cGAGACCGTTTAAGCTGAACGGGCAGCAGATTGACATACCGTTCTTTCGCCATATCAAACTGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCGACGTGGACAGGACAAAGAAATGCCACCTCCGGCAGGATACTAAAGGCCGCAAGTGTAACCCGAATAACGCGGAAGACCACTATCC‑AACAGTCAGGCGCGTAGATAAAGAATAGGAAAAAGCCTAGCAtttgaacc                                                                                                                                                                                                                                            >  2:364166/1‑245 (MQ=255)            ccGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTtgtactgaccc                                                                                                                                                                                                                                       >  1:368794‑M1/1‑240 (MQ=255)                             tttgggaattaaacctttttctccatgtttttcatagagggcaacccatgtcctgacctgggttcgggggacaccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaactgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGa                                                                                                                                                                                                                         <  1:255051‑M1/29‑1 (MQ=255)                                gggaattaaacctttttctccatgtttttcatagagggcaaccctggtcccgacctggtttcgggggacaccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggcgttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATGCGACGAGGCTTTATAGCTAGattgacgcg                                                                                                                                                                                                                     >  2:304528‑M1/218‑246 (MQ=255)                                 cagATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTtgtactgaccccaaaaagttggacagttaaac                                                                                                                                                                                                                  >  1:3366‑M1/1‑219 (MQ=255)                                                ttcttTCGCCATATCAAACTGATGACGCTGGCGCCCGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCACAGTGGACAGGAAAAAGACATGACACCTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGCTAAAGCATAGTAAAAAGCCTCGCATTtgtactgcccccaaaaagttggacagttaaacacgaggaatataggt                                                                                                                                                                                                   >  2:206916‑M1/1‑204 (MQ=255)                                                   ccatgtttttcatagagggcaacccatgtcctgacctgggttcgggggacaccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGt                                                                                                                                                                                                 >  1:298078‑M1/199‑251 (MQ=255)                                                       gCCATATCAAACTGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCGCGCATTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattc                                                                                                                                                                                            <  2:313094‑M1/251‑55 (MQ=255)                                                              cAAACTGATGTCGCTGGGGACAGATATAGCGGTTTTTTTCACGCGAAAGAGTCTGATGGCAAAGTGGACAGGAAAAAGACAGGACAACTCCGGCAGGATACTAAAGGCCTCAAGTGTAACGCTAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTtgtactgaccccaaaaatttggacagttaaacacgaggcatataggtctgattccgatata                                                                                                                                                                                     <  2:141696‑M1/251‑62 (MQ=255)                                                                 gagggccccccatgtcctgacctgggtccgggggacaccaaaacgtgacgagatgatcctgtaaccatcatcagttgtgcagcagtgattcacgccttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATc                                                                                                                                                                                       <  2:261892‑M1/63‑1 (MQ=255)                                                                  cTGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTtgtactgaccccaaaaagttggaaagttaaacacgaggcatataggtctgattccgatattcaat                                                                                                                                                                                 >  1:290809‑M1/1‑186 (MQ=255)                                                                           catgtcctgtcctgggtgcgggggacaccaaaacgtgcctagatgagcatgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattgtggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGATTCTTTATAGCGATAGTTAAGCGTATTCACACTTCAGATCGGTGTATTCGGGCAGATAGCTATTACg                                                                                                                                                                         >  2:276124‑M1/175‑251 (MQ=255)                                                                                  tgacctgggttcgggggacaccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacgcaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAAc                                                                                                                                                                    <  1:86655‑M1/82‑1 (MQ=255)                                                                                       ataGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAACGAGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGAGTAACGCGAATCACGCGGCGGGCAAATATCAGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaattt                                                                                                                                                            >  1:20601‑M1/1‑165 (MQ=255)                                                                                                  tttCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAAACACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTtgtactgaccccaaaaagtttgacagttaaacacgaggcatataggtctgattccgatatgcaattggagtcaggccttttaatttcaggctaatt                                                                                                                                                  <  2:303490‑M1/250‑97 (MQ=255)                                                                                                     cACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattctt                                                                                                                                               <  1:385043‑M1/250‑100 (MQ=255)                                                                                                       cgcgAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctg                                                                                                                                            >  1:306902‑M1/1‑149 (MQ=255)                                                                                                            aaGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACTCGAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattgtagtcagaccttttaatttcaggctaattcttctgctgtt                                                                                                                                       <  2:220529‑M1/251‑108 (MQ=255)                                                                                                                    gATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagta                                                                                                                                 <  1:6017‑M1/249‑114 (MQ=255)                                                                                                                        gCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTtgtactgaccccaaaaagttggacagttaagtacgaggcttataggtcttattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaat                                                                                                                           <  2:144089‑M1/251‑120 (MQ=255)                                                                                                                        atcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTc                                                                                                                             <  2:121551‑M1/121‑1 (MQ=255)                                                                                                                             gtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcagcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTCAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGt                                                                                                                        >  2:226495‑M1/125‑250 (MQ=255)                                                                                                                               ggACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcgatatattc                                                                                                                     <  1:88647‑M1/250‑126 (MQ=255)                                                                                                                                gACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcagggtaaggcttctgctgttgtagtattcaatatattccg                                                                                                                   <  2:207349‑M1/251‑128 (MQ=255)                                                                                                                                  catcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGAc                                                                                                                  <  2:113137‑M1/132‑1 (MQ=255)                                                                                                                                          gttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGcc                                                                                                          <  1:365520‑M1/140‑1 (MQ=255)                                                                                                                                          gttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCATCAGcc                                                                                                          >  1:113828‑M1/112‑251 (MQ=255)                                                                                                                                             gtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtcttttggctttgccatattaggggctattccatttcatcgtcaaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCCACGTTCTGACCTTCAGcc                                                                                                          <  2:434560‑M1/140‑1 (MQ=255)                                                                                                                                             gtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggttttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGAGTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGGCCTTTCTGGCCGTCCTGAATTGCGAACTCAACGTTCTGACCTTCAGCCaga                                                                                                       >  2:63029‑M1/109‑251 (MQ=255)                                                                                                                                             gtgaagtagtgagtcacgaattcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCag                                                                                                        >  2:67097‑M1/109‑250 (MQ=255)                                                                                                                                                  cAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcggctgctgttgtagtattcaatatattccgtaacagcatccttcagtt                                                                                                 <  1:258518‑M1/251‑146 (MQ=255)                                                                                                                                                    agtgattcacgacttcaaggcgcttttcaaaagggaattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCCGCCAGAGTTTTg                                                                                                 <  1:286339‑M1/149‑1 (MQ=255)                                                                                                                                                                   tAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATCTCCGAAC‑GCAAGGAGAGAAGATAAAGCATAGTAAAAAGCCTCGGCTTtgtactgaccccaaaaagttggacagttaaacacgaggcatctaggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagta                                                                                                                                 >  1:391350‑M1/1‑89 (MQ=255)                                                                                                                                                                   tAAAGGCCGCAAATGTAACGCGAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTtgtactgaccccaaaaagttggacagtgaaacacgaggcatataggtctgattccgatattcaatgggagtcagaccatttaatttcaggctaattctgctgctgttgtagta                                                                                                                                 <  2:391350‑M1/202‑114 (MQ=255)                                                                                                                                                                     aggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCATAGTTTTGAAGCAATTACCCTGGATa                                                                               >  2:301890‑M1/85‑251 (MQ=255)                                                                                                                                                                     aggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTGATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAGCAGCTGCCGGACCTTTCTGGCCGTCCTGAATCTCGAACTCAACGGTCTGACCGTCAGCCAGAGTTTTGAAGCCATTACCCTGGATa                                                                               >  1:395611‑M1/85‑251 (MQ=255)                                                                                                                                                                      ggcgcttttcaaaaggggattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGAt                                                                                <  2:48704‑M1/166‑1 (MQ=255)                                                                                                                                                                          cgcaggagtaacgcgaATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGTGCGAAGATAAAGCTTAGTAAAAACCCCAGAATTtgtactgccaccaaaaagttggacagttaaacacgaggcatataggactgattccgatattcaattggcgtcagaccttttaaattcaggctaattcttcttctgttgtagtattcaatatattccgtaacagaatccttcagttcgcttatattactgaaatcatca                                                                          >  2:241892‑M1/8‑82 (MQ=255)                                                                                                                                                                               caaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAgt                                                                     <  2:88024‑M1/177‑1 (MQ=255)                                                                                                                                                                                          tttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAacac                                                           >  1:426656‑M1/64‑250 (MQ=255)                                                                                                                                                                                           ttggcgttgacatattaggggctattccatttcagcgtcgaacaaaatgggtgcattacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACTCTTCAGATCAGTGGATTCGATCAGATAGTTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTTCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGACGCCAGTACCCGGGATAGCGGAGAAGTGTACGAAcaca                                                          >  2:255051‑M1/63‑250 (MQ=255)                                                                                                                                                                                              gctttgacatattagggtcttttccatttcatcggccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACAATTCAGATCAGTGGATTCGATCAGATAGCTTTTACGTTAACAGCTGCCGGACCATTCTGGCCGCCCTGAATTTCTAACTCCACGTTCTGACCTTCAGCCAGAGTTTTGCAGCCATTACCCTGTATAGCGGAGAAGTTTACGAACACATCtt                                                      >  2:287861‑M1/60‑251 (MQ=255)                                                                                                                                                                                                  tgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCATCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGGTTACGAACACATCTTtgct                                                  <  2:148957‑M1/196‑1 (MQ=255)                                                                                                                                                                                                      atattaggggctattccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGcc                                               <  2:371514‑M1/199‑1 (MQ=255)                                                                                                                                                                                                          atatCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttcatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaa                                           >  1:32850‑M1/1‑50 (MQ=255)                                                                                                                                                                                                                  attccatttcatcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGt                                   >  1:48704‑M1/40‑250 (MQ=255)                                                                                                                                                                                                                            atcgtccaacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCa                         <  1:269356‑M1/221‑1 (MQ=255)                                                                                                                                                                                                                                   aacaaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCttt                 >  1:181421‑M1/23‑251 (MQ=255)                                                                                                                                                                                                                                      aaaatgggtgcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCGTTAGa              >  1:154271‑M1/20‑251 (MQ=255)                                                                                                                                                                                                                                               gcagtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTGCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGa      >  2:319007‑M1/11‑250 (MQ=255)                                                                                                                                                                                                                                                  gtacacaCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCa  >  1:434560‑M1/8‑251 (MQ=255)                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                    GGATCACGAGACCGTTTATGCTGAACGGGCAGCAGATTGACATACCCTTCTTTCGCCATATCAAACTGATGTCGCTGGGGACAGATATAGCTGTTTTTTTCACGCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAAC‑GCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTTGAAGCCATTACCCTGGATAGCGGAGAAGTGTACGAACACATCTTTGCTGCCATCAGCCGGAGTAATGAAGCCAAAACCTTTAGACTCGTTGAACCA  >  NC_000913/1906918‑1907408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.