| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,638,268 | G→A | W209* (TGG→TGA) | pitA → | metal phosphate:H(+) symporter PitA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,638,268 | 0 | G | A | 98.5% | 213.7 / ‑6.6 | 66 | W209* (TGG→TGA) | pitA | metal phosphate:H(+) symporter PitA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (38/27); minor base T (1/0); total (39/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.24e-01 | |||||||||||
GGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGT > NC_000913/3638030‑3638509 | ggagtGGTTTAACCAATGCGTTGAGGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCGGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGGGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCTTATTgcg < 1:464339/247‑1 (MQ=255) ggTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGGGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGAt < 2:302029/251‑1 (MQ=255) tAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAATAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCt < 1:464392/250‑1 (MQ=255) gttgatgtgcggggcgttattggtggATTCACTCAATATCCCGAATGTATTAAGTATTTTCGGTGTTCTGTTCGTTTCCCCTTTTGTCGGCTGGGTGTTTGCTGGCGGTCTGATTTTCTTGCTCCGTCCCTACTGGTGCGGCACCAAGAAACGCGCCTGTAACCACCTGACCCCAGCGGAGCGTGAAAAGAAAGCCGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATc < 2:392318/230‑1 (MQ=255) ccGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAGGTATTTTCGGTTCTCGGATCGTTCCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTTATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCGGACCCCAGCGGGGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGGGGCGttgtc < 2:360228/250‑4 (MQ=255) gTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGGATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGc > 2:95659/1‑251 (MQ=255) aGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTTTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCCCCTGACCCCAGCGGAGCGGGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGGTATCGACGGGGCGTTTTCGcccg > 2:97494/1‑248 (MQ=255) aGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCAACAAGAAACGCGACCGTATCCACCTGAACCCAGCGGCGCGTGAAAAGAAAAACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTCTCGACGTGGCGTTTTCGcccg > 2:312123/1‑248 (MQ=255) ggATGCACTCAATATCACGACAGCATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGCAACGCGCCCGCATCCACCTGACCCCAGCAGAGCGGGAAAAGAAAGACGGCAAGCAAAAGCCGCCGGTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGAGGCGTTTTCGCACGGcgcg > 2:56165/1‑250 (MQ=255) cAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGt < 1:168374/250‑1 (MQ=255) cccGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTCCTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGGGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGGATTGCGCTGATCCCTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACCATGGTCCGaa > 2:29171/1‑249 (MQ=255) cccGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGACCTGGTGTTTGCTGGCGGTCTGATTTTCTTACTGCGTCGCTACTGAAGCGGCACCAAAAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAAAAGGCAAGAAAAAACCGCCGTTCTgg > 1:304813/1‑181 (MQ=255) cGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAACCGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGc < 2:145165/251‑1 (MQ=255) aaaGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCAt > 1:132918/1‑251 (MQ=255) agtattaagtattTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGACTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGATGGGCACCAAGAAACGCGGCCGTATCCACCTGACCCCCGGGGAGCGCGAAAAGAAAGAAGGCAAGAAAAAACCGCCGTTCTGAACGCGTATTGCGCTGGTCCTTTCCGCTATCGACGTGGCGGTTTCGCCCGGCGCGAACGATGGTCAGCAAGGCAttt > 1:91400/1‑250 (MQ=255) gtattaagtattTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGGGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTCTTGCGCTGATCCTTTTCGCTATCGACGTGGCGCTTTCGCCCGGCGCGAACGATGGTCAGAAAGGCATTgg > 1:241839/1‑251 (MQ=255) tattaagtattTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGt > 1:109827/1‑251 (MQ=255) attaagtattTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGt < 1:312123/250‑1 (MQ=255) attaagtattTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTc < 1:265835/251‑1 (MQ=255) attaagtattTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTc < 1:95659/251‑1 (MQ=255) taagtattTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTg > 1:370954/1‑251 (MQ=255) taaggtttttCGGTTCTCGGATCGTTCCCCCTATGGTCGGCCGGGTGTTTGCGGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGGATTGCGCTGATCCTTTCCGCTATCGACGGGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCt < 2:221467/244‑1 (MQ=255) gtattTTCGGTGCTCTGATCGTTTCCCCTATTGGCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCCCCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGtt < 2:394486/251‑1 (MQ=255) tttCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGCGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAACCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGGCAGAAAGGCATTGGTCTGGGTATGt > 1:319260/1‑251 (MQ=255) tctcTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTatt > 1:496480/1‑251 (MQ=255) tctGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTattgt > 2:270637/1‑250 (MQ=255) ctGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAGGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTattgat > 1:404064/1‑251 (MQ=255) gttCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTattgattg < 2:97107/249‑1 (MQ=255) gATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGCGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTTCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTattgattg > 1:10635/1‑251 (MQ=255) gATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTattgattg < 1:486649/251‑1 (MQ=255) cGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGCTGGTCAGAAAGGCATTGGTCTGGTTATGTTGGGATTGATTGGCg > 1:138068/1‑251 (MQ=255) cGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGc < 1:269635/250‑1 (MQ=255) ccccTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACGGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTGTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTcgcg < 2:370954/251‑1 (MQ=255) ccTATTGTCGGCCTGGTGTTTGATGGCGGTCTGATTTTCTTTCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCCAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCCATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGGCGCGcc > 1:84979/1‑251 (MQ=255) ttGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCCCCAAGAAAACCGCCCGTATCCACCCGACCCCCGCGGAGCGTGAAAAGAAAGACGGCCAGAAAAAACCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTCTCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTTTGTTGGTATTGTTTAGCGTCGCGCCAGCAGGCTTCgtggtctcc > 2:96653/1‑247 (MQ=255) tGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAAc > 1:367231/1‑250 (MQ=255) tgcGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGCCCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGATTGCCACTGGCTACGAAATc > 2:145444/1‑251 (MQ=255) tACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCacccgtac > 1:393499/1‑251 (MQ=255) ggCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGCGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGc > 1:437600/1‑251 (MQ=255) cACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCa < 1:333701/251‑1 (MQ=255) aCCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCAt > 1:295533/1‑251 (MQ=255) cAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATc > 1:332136/1‑250 (MQ=255) aaGAAACGCGCCCGTATCCACCTGCCCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAACAAGCCGCCGTTCTGAACGCGTATTGCGATGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGCCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCAACTGGCTACGAAATCACCCGTACCCGTGATGCAATca > 2:538912/1‑250 (MQ=255) gAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATcaac > 1:429979/1‑250 (MQ=255) cgcgCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGt < 1:270637/251‑1 (MQ=255) gcCCATATCCCCCTGCCCCCAGGGGGGCGTGAAATGAACGACGTCAAGAAAAACGCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTTCCCGTGATGCCATCCACAACGTCGa < 2:298836/251‑1 (MQ=255) cccGTAGCCACCGGTCCCCAGCGGAGCGTGAAAAGAAAGACGGCAATAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTTGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCATCAACGTCGaa < 2:319260/251‑1 (MQ=255) aTCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCtt > 2:208594/1‑250 (MQ=255) aTCCACCTGACCCCAGCGGAGCGAGAAAAGAAAGACGGCAAGAAAAAGCAGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGACATCACCCGTACCCGTGATGCCATTAACAACGTCGAAGCtt > 2:89274/1‑250 (MQ=255) gACCCCATCGGAGCGGGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGTTATTGATTGGCGTCGCGCCAGCAGGCTTCTTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGa < 2:518501/249‑1 (MQ=255) ccaaGCGGAGCGTGAAAAGAAAGACGGCAAAAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGagcagc < 2:84979/248‑1 (MQ=255) ggAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATcaacaa > 1:266837/1‑222 (MQ=255) ggAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAAGCACCCGTACCCGTGATGCCATcaacaa < 2:266837/222‑1 (MQ=255) gtgaaaaaGAAAGACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCgct < 2:249034/247‑1 (MQ=255) aaagaaagACGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTc > 1:473625/1‑250 (MQ=255) aagaaagaCGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCgctgctaa > 2:357037/1‑248 (MQ=255) gaaagaCGGCAAGAAAAAGCCGCCGTTCTGAACTCGTATTACGCTGATCCATTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATAGATTGGAGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGCCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGCGCAGCATCCTGCGCTGCTCaacc > 1:347985/1‑249 (MQ=255) gaaagaCGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGGATTGATTGGCGTAGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCAACCGTACCCGCGATGCCATCAACACCGTCGACGCTTACTTTGCGCAGCATCCTGCGCTGCTCaaa > 2:368004/1‑250 (MQ=255) aaagaCGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAAc > 1:364564/1‑250 (MQ=255) aaagaCGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACa < 2:224379/251‑1 (MQ=255) gaCGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGc > 1:416931/1‑251 (MQ=255) cGGCAAGAAAAAGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCAGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCt > 1:309286/1‑250 (MQ=255) aaaaGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCgtggct > 2:189845/1‑246 (MQ=255) aaaGCCGCCGTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTg > 1:323250/1‑224 (MQ=255) aaaGCCGCCGTTCTGAACGCGGATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTAGTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTg < 2:323250/224‑1 (MQ=255) aGCCGCCGGTCTGTACGCGTATTGCGCTGATCCTTTCCGCTATCGACGAGGCGTTTTCGCCCGGCGCGAACGATGGCCAGAAAGGCATTGGTCTGGTTATGATGGCATTGATTGGCGTCGCGCAAGCAGGCTTCAGGATGAACATGAATGCAACTGGCTACGAAATCACCCGTACCCGAGATGCCATCAACACAGTCGAAGCTTAATTTGAGCAGCCTCCTGCGATGCTCAAGCAGTCCACCGGTGGTGac > 2:6639/1‑250 (MQ=255) gccgTTCTGAACGCGTATTGCGCTGATCCTTTCCGCTATCGACGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGt < 2:393499/251‑1 (MQ=255) | GGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGT > NC_000913/3638030‑3638509 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |