| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,061,935 | G→A | S46N (AGC→AAC) | torD → | trimethylamine‑N‑oxide reductase‑specific chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,061,935 | 0 | G | A | 96.1% | 139.8 / NA | 54 | S46N (AGC→AAC) | torD | trimethylamine‑N‑oxide reductase‑specific chaperone |
| Reads supporting (aligned to +/- strand): ref base G (0/1); major base A (27/22); minor base C (0/2); total (27/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
GGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCG‑CGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTG‑AGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGA > NC_000913/1061691‑1062180 | ggttgAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCATTGCGAATAGGTTCCCG‑CGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACA‑GAGTGCCTG‑TGTGTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCAAGTACGCAGATGTCTGAATGG‑TTTTCG‑TGGCTGAAAAACGAAcc < 1:480410/247‑1 (MQ=255)ggtggAAATTGAGAAGTACAACGGAACAGGGGAGCAGGTGACGGCGTGTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCG‑CGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGaa < 2:393952/249‑1 (MQ=255) ggAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCG‑CGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCGGAATGG‑TTTTCG‑TTGCTGAAAAACTAAccgcc < 1:322990/251‑1 (MQ=255) gagaAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCACGTGGAGCTGGCGGCGCAGTGCGAATATGTTCCCG‑CGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCCCAGATGGCTGCATGG‑ATTTCG‑TTGCTGAAAAACGAACCGACGCTCACt > 2:519988/1‑251 (MQ=255) gaAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCG‑CGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTgc > 1:42213/1‑251 (MQ=255) aGTAAAACGGAACAGGGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGAGGGTGGCGCAGTGCGAATATGTTCCCG‑CGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCGGGCTAGCGCAGTTGTTCTCCCGTGAGCGGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTgcgg < 1:215582/251‑1 (MQ=255) cAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCG‑CGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGt > 1:381674/1‑251 (MQ=255) aGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCG‑CGTCGCAGGTGAAATCATGACCACGCTGCCAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCt > 1:263268/1‑251 (MQ=255) gTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCG‑CGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGGATTGCCAc > 2:241152/1‑251 (MQ=255) aagggCCCCGGGGAGATGGTGGTGCAGTGCTAATATGTTCCCG‑CGCCTGAGGTGAATTCTGGACCACGGTGACAGCCCATCATGGTT‑CCTG‑TGTTTTC‑GCTTGTGTAGCGATGTGGTTTGCCCGTGAGTGGGATGATGAACAATGGACGAAAATCGCTAGTGCGCGTAGGGCTGAAGGG‑TTTTGG‑TTGCTTAAAATCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCt < 1:336360/247‑1 (MQ=255) gCCCCGTGGCGATGGTGGCGCAGTGCGAATATGTTCACG‑CGTCACAGGAGAACTCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGGGCTGGACGATGGACAACTGACGGCAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGCGCACGAGCGGGCAGACCGTCTTGCCACGCTGAccg > 1:25863/1‑249 (MQ=255) cccgggtggttgggggcgcatggtgAATTTGTTCCCG‑CGGCGCGGGTAAAACCAGGGCCACGCTGACAGCACAACA‑GAT‑GCCTGGTGTTTCC‑GCCTGGCTGGCTCAGTTGTTCTCCGGGGAGCGGGAGGATGAACAACGGACGAAAATGGCCAGGCCGCAGATGGTTGAGTGG‑TTTTCT‑TTGCGGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTa < 2:42213/227‑1 (MQ=255) cccGTGGAGAGGGTGGCGCAGTGCGAATATGTCCCCG‑CGTCGCAGGTTAAATCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCGGGCTAGCGCAGTTGTTCCCCCGTGAGCTGGACGATGAACAACTGACGCAAATCTCCAGTGCGCAGAGGGCTGAATGT‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTa < 1:434861/251‑1 (MQ=255) ccggggtgaggggggCGGAGTGGGAATATGT‑CCCGTCGTCGCGGTTGAAATCCGGCCCCCGCGGACGGCACAAAG‑GATGGCCTG‑‑GTTTACCGCCGGGCTAGCGCAGTTGTTCCCCCGTGGGCTGGACGATGAACAACTGCGGCAAATCGCCAGGGCGCAGAGGGTGGATTGG‑TTTTGG‑TTGCTGAAAACCGACCCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTAc < 2:140850/238‑1 (MQ=255) gTGGAGATGGTGGCGCAGTGCGAATATGTTCCCG‑CGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAAcc > 2:182616/1‑228 (MQ=255) gTGGAGATGGTGGCGCAGTGCGAATATGTCCCCG‑CGTCGCAGGTGAAATCATGACCCCGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCCCCCGTGAGCTGGACGATAAACAACTGACGAAAACCGCCAGTGCGCGGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAAcc < 1:182616/228‑1 (MQ=255) ggAGATGGAGGCGCAGTGCGAATATGTTCCCG‑CGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTTCCACGCCGACAGTACgggg > 2:59704/1‑248 (MQ=255) gagggtggCGCGGTACGAATATGTTCCCG‑CGTCGCAGGTGAAATCATGACCCCTCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTGCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGa < 1:466646/248‑1 (MQ=255) gcAGTGCGAATATGTTCCCG‑CGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑ACCTGGCTAGCGCAGATGTCCTCCAGTGAGCTGGCAGATGAACAACTGACGCACATCGCCAGTGCGCAGATGGCTGAATGG‑ATTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGCAAGAGCTGGTAACCCGTATTGCCACGCTGAccggaacgggcgcaccccgtcc > 2:325221/1‑230 (MQ=255) cgTCGCAGGTGAAATCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACtttt > 1:6030/1‑251 (MQ=255) cGCAGGTGAAATCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGc < 1:106711/250‑1 (MQ=255) gCAGGTGAAATCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCAAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGGTGGAAAACCGGATTGCCACGCTGGCATGAAGGGACGATGCCCGGCTGGAAATGGCCGCGGGCTTTTGCgg > 2:349695/1‑251 (MQ=255) gTGAAATCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGGCAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTg > 1:394505/1‑251 (MQ=255) aaTCATGCCCACGCTGACAGCACAACA‑GATGGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTc < 1:126818/251‑1 (MQ=255) atcccgACCCCGCTGACAGCAAAACA‑GTTTGCCTG‑TGTTTAC‑GCCGGCCTAGCGCAGTGTTTCCCCCGTGAGCGGGAGGATGAACACCTGACGAAAATCGCCAGTGCGAAGATGGCTGAATGG‑TTTTCG‑TGGCGAAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCt < 2:132145/246‑1 (MQ=255) cacaACA‑GATTGCCTG‑TGTTTCC‑GCCTGGCTAGCGCAGTAGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGAATTGCCCCGCTGACAGTACGTGACGATTCCCGTCTGGCACTGGCCGAGGACTTTTGCGGGCTGTTTATGAGGACCGGCACACAAgcg > 2:69886/1‑251 (MQ=255) acaaca‑GATTGCTGG‑TGTTTAC‑CCCGGGCAGGCGCAGTTTTTCTCCCGTTAGCTGGACGAGGAACAACTGACGAAAATCGCCGGGGCGCAGAGGGCGGAATGT‑TTTTCG‑TTGCTGAAAAAGGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGTAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgcgg < 1:519988/251‑1 (MQ=255) g‑tgtTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGc > 1:52902/1‑250 (MQ=255) tttAC‑GCCTGGCGAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGAAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATc < 1:280204/250‑1 (MQ=255) ttAC‑GCCTGGCTCGCGCAGTTGTTCTCCCGGGAGCTGGACGATAAACAACTGACGAAAATCGCCAGTGCGCAGAGGGCTGAATGT‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCg < 1:50321/250‑1 (MQ=255) aGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAgg > 1:406642/1‑251 (MQ=255) cgcAGTTGTTCTCCCGTGAGCTGGACGATGCACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAACACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGGATGGAACTCGCCGCGGACTTTTGCGGCCTGGTTCTGATGACCGACAAACAAGCCGCGCTGCCGGAAGCCTAGGCCTACaaaacggac > 1:509436/1‑245 (MQ=255) cgcAGTTGTTCCCCCGTGGGCTGGACGATGAACAACTGACGCAAATCGCCGGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGAc < 1:506916/251‑1 (MQ=255) gtccgcccgtggtttGGAGGATGAACATCGCACGAAAACCGCCAGGGCGCAGGTGGCTGAATGG‑TTTGGT‑TTGCTAAAAAGCGATCCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTGTGCGGGCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACGTGACGAGCaa < 2:248778/236‑1 (MQ=255) ctcCCGTGAGCTGGACGATGAACACCTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGCACGAGCTGGAAAAACGTATTGCCACGCTGACAGGCAGCGACGATGCCCGTCTGGCACCGGCCCAGGCCTTTTGCGGCCTGTTTCTGATGCCCGGTACACCAGCCGCGCTGCCCTATGCAACGGCCCACAAACAGGAcatgcaagcg > 2:393446/1‑241 (MQ=255) tGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTTCCACGCTGCCAGTACGTGACGATGCCCGGCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCAt > 2:398911/1‑218 (MQ=255) tGAGCGGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCAt < 1:398911/218‑1 (MQ=255) cgaggAACAACGGACGCAAATCGCCAGTGCGCAGATGGCTGAATGT‑TTTTCG‑TGGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTAc < 1:32162/121‑1 (MQ=255) cGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACCGTAc > 2:32162/1‑125 (MQ=255) gATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGCGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGAGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGCACAAGGGATTAAACCGTTGTTAGt > 2:147509/1‑251 (MQ=255) ataaacaacTGACGCAAACCGCCAGTGCGCAGATGGCTGAATGT‑TTTTCG‑TGGCTAAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGcc < 1:495689/131‑1 (MQ=255) aTGAACAACTGACGCAAATCGCCAGTGAGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGCGATGGAAAAACGTATTGCCACGCTGACCGTCCGTGACGATGcc > 2:495689/1‑134 (MQ=255) gccGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCAGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGGCAGTACGTGACGATGCCCCTCTGGGACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTTTGCATCGGGCTACAAACAGGACGCGCAAGAGATTAAACGCTTGTTAGTTG‑AGGCCgggg > 2:413142/3‑250 (MQ=255) cgaaaaTCGCCGGTGGACATATGGCT‑AATGGGTTTTCG‑TTGCTGAAAACCGATCCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGCTTCCTGTCTGGACCTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCGGCCGTATGCATCGGCCTACAAACAGGACGAGTAAGAGATTAAACGCTTGTTAGTTG‑AGGCAGGGATg < 1:532974/248‑1 (MQ=255) gCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTG‑AGGCAGGGATgg > 1:95477/1‑251 (MQ=255) gCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAACGCACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGGCTGGGACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACACACAGGACGAGCAAGAGGTTCAACGCTTGTTAGTTG‑GAGCAGGGATGGGAAcc > 2:39025/1‑249 (MQ=255) cgaGTGCGCAGAGGTCTGAAGGT‑TTTTCG‑CTGCGAAAAAACAAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTG‑AGGCAGGGATGGAAACCAGc < 1:289180/249‑1 (MQ=255) catagggttaaagg‑TTTTCGGTTGCGGAAAAACAATCCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTGTTGCGGCCTTTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTG‑AGGCAGGGATGGAAACCAGCGGCAAttt < 1:306784/239‑1 (MQ=255) gATGGCTGAATGG‑TTTTCG‑TTTCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTTGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTG‑AGGCAGGGATGGAAACCAGCGGCAATTTCa < 1:20351/251‑1 (MQ=255) ggCTGAATGG‑TTTTCG‑TTACTGAAACACGAACCGCCGCTCACTGCGGCGGCGCCAGCGATGGAAAAACGCATTGCCACGCTAACAGTACGTGACGATGCCCGACTGGAACTGGCCGCGGAATTTTGCGGCCTGTTTCTGATGACCGACAAACACACGGCGCTGCCGTATGAATCGGCCTACAAACAGGACGAGCCAGACATTAAACGCCTGTTAGTTGGAGAC‑GGGATGGAAAACAGCGGGAAttttcacg > 2:243762/1‑246 (MQ=255) gctgatggg‑TTTTCG‑TGGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTG‑AGGCAGGGATGGAAACCAGCGGCAATTTCAACGa < 1:241152/244‑1 (MQ=255) cTGAATGG‑TTTTCG‑TTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTG‑AGGAAGGGATGGAAACCAGCGGCAATTTCAACGa > 1:255368/1‑250 (MQ=255) gtttttcgttgaaaaaaaTCGAGCCGCCGCTCACTGCGGCGGGGAACGAGCTGGAAAACCGTATGGCCACGCTGACAGTACGTGACGAGGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTG‑AGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGc < 2:110158/236‑1 (MQ=255) gAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGGAAACCGTATTGCCACGCTGACAGTCCGTGACGATGCCCGACTGGAACTGGCCGCGGACTTTTGCAGCCCGTTTCTGATGACCGACAAAAAAGCGGCGCTGCCGTATGCATCGGCCTACAAAAAGGACGAGCAAGAGATTAAACGCTTGTTGGTTG‑AGGCAGGGATGGAAACCAGCGGCAATTTACACGAACCGGCAGATCCTCTGGCgg > 1:80821/1‑250 (MQ=255) | GGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCG‑CGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACA‑GATTGCCTG‑TGTTTAC‑GCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCG‑TTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTG‑AGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGA > NC_000913/1061691‑1062180 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |