Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,040,126	G→T	L277L (CTG→CTT)	appB →	cytochrome bd‑II subunit 2

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,040,126	0	G	T	100.0%	179.6 / NA	55	L277L (CTG→CTT)	appB	cytochrome bd‑II subunit 2
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (26/29);  total (26/29)

GTTCACAGCTGGCGACCAAACGCGCTGCACTGTTGGTGATGCTGTGCTTTTTGCTGGCGGGTTACTGGCTGTGGGTCGGTATTGATGGCTTTGT‑ACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTGACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATATTTTTGCCCATTGTGTTGCTCTACACTCTCTGGAGC  >  NC_000913/1039891‑1040366                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                  gTTCACAGCTGGCGACCAAACGCGCTGCACTGTTGGTGATGCTGTGCTTTTTGCTGGCGGGTTACTGGCTGTGGGTCGGTATTGATGGCTTTGT‑ACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGGTGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGAtt                                                                                                                                                                                                                                    >  1:365739/1‑251 (MQ=255)            gcgcccaacctcgcttctcTGTTGGTGATGCTGTGTTTTTTTCTGGCGGGTTACTGGCTGTGGGTCGGTAGTGATGGCTGTGT‑ACTGCTCGCCCATGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGTAGTGCTACCTGTTTCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGTATCTTCCCGCTGCTGGGATTCTTCTGCCTATTGCTTACGGGGATGGCTAGTTATCGTGGTCg                                                                                                                                                                                                                         <  2:426711/233‑1 (MQ=255)                    aCGCGCTGCACTGTTGGTGATGCTGTGCTTTTTGCTGGCGGGTTACTGGCTGTGGGTCGGTATTGATGGCTTTGT‑ACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGtt                                                                                                                                                                                                                 <  1:244142/251‑1 (MQ=255)                            cACTGTTGGTGATGCTGTGCTTTTTGCTGGCGGGTTACTGGCTGTGGGTCGGTATTGATGGCTTTGT‑ACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGAGGAttt                                                                                                                                                                                                         <  1:155106/251‑1 (MQ=255)                             ccTGTTGGTGAGGCTGTGCTTTTTGCTGGCGGTTTACTGGCTGTGGGTCGGTATTGATGGCTTTGT‑ACTTCGCGCCCAGGATGCTATCGTTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTTCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGTTGCTTGGATTCTTCTGCCCATTGCTTCCGTTGATGGGGATTTATCGTGGTCGCCCGGGTTGGGGAtttt                                                                                                                                                                                                        <  1:312237/250‑1 (MQ=255)                              cTGTTGGTGATGCTGTGCTTTTTGCTGGCGGGTTACTGGCTGTGGGTCGGGATTGATGGCTTTGT‑AATGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTTATGAAACTGGGGGCAGTGCTACCTGGTGCCTGGGTGAATAATTTTGTCGAGTTGCCCGTTTTGTGGATCTTCCCGCTGCTGGGGTTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGGTGGGGGttttt                                                                                                                                                                                                       >  1:429297/1‑251 (MQ=255)                                   ggTGATGCTGTGCTTTTTGCTGGCGGGTTACTGGCTGTGGGTCGGTATTGATGGCTTTTT‑ACTGCTCGCCCAGGATGCTAACGGGCCTTCCAATCCGTTTATGAAACTGGGGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCCCTGCTGGGATTCTTCTGCCCCTTGCTTACGGGGTTGTCGGTTTATCGTGGTCGCCCGGGTTGGGGGTTTTtggtgg                                                                                                                                                                                                  >  2:147664/1‑251 (MQ=255)                                    gTGATGCTGTGCTTTTTGCTGGCGGGATACTGGCCGTGGGACGGTATTGATGGCTTTTT‑ACTGCTCGCCCCGGATGCTTAAGGTCCTTCCAATCCGATCATGAAACTGGGGGCCGTGCTACCTGGGGCCAGGGTGGATAATTTTGTCGAGTCGCCCGTTTTTTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCCTTGCTTATGGTGATGGCGCTTTATCGTGGTCGCCCGGGGTGGGGAttttttttggc                                                                                                                                                                                                 >  2:166995/1‑245 (MQ=255)                                     tGATGCTGTGCTTTTTGCTGGCGGGGTACTGGCTGGGGGTCGGGATTGATGGCTTTGT‑ACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTAACTGGTGCCTGGATGGATAATTTTGGCGGGTCGGCCGTTTTGTGGGTTTTCCCGCCGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTTTCGTGGTCGCCCGGGGTGGGGGTTTTTTATGGc                                                                                                                                                                                                 >  2:102583/1‑250 (MQ=255)                                            gtgCTTTTTGCTGGCGGGTTACTGGCTGTGGGTCGGTATTGATGGCTTTGT‑ACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGGTGATGGAACTGGGGGCAGTGCTACCTGGTGCCTGGATTCATAATTTTGTCGGGTCGCCCGTTTTGGGGATCTTCCCGCTGCTGGGATTCTTCTTCCCAATGCTTAAGGTGATGGCGATTTTTCGTGGTCGCCCGGGGTGGGGATTTTTTACGGCATCCTTg                                                                                                                                                                                          >  2:97759/1‑250 (MQ=255)                                                    tGCTGGCGGGTTACTGGCTGTGGGTCGGTATTGATGGCTTTGT‑ACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCTATTTAGCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAAtt                                                                                                                                                                                  <  2:316494/250‑1 (MQ=255)                                                     gCTGGCGGGTTACTGGCTGTGGGTCGGTATTGATGGCTTTGT‑ACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAAttt                                                                                                                                                                                 <  1:160122/250‑1 (MQ=255)                                                        ggCGGGTTACTGGCTTTGGGGCGGTATTGATGGCTT‑GTGACTGCTCGCTCATGATGCTGACGGTCCTTCCAATCCGTTAATGAAACTGGTGGTAGTGCTAGCTTGTGCCTGGATGAATAAGTGTGTCGAGTCGTCCTTTTTGTTGAGCTTTCTGCTGCTGTGATTCTTCTGTCCATTGCTTACTGTGATGGCGAGTTAGCGTGGTCGGCCTGGTTGCGTTTTTTTGATGGCATCATTGATGCAATTTGGc                                                                                                                                                                              <  1:485603/250‑1 (MQ=255)                                                          ggggTTACTGGCTGTGGGTCGGTATTGATGGCTTTTT‑ACTGCGCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTg                                                                                                                                                                           <  2:404587/250‑1 (MQ=255)                                                             gTTACTGGCTGTGGGTCGGTATTGATGGCTTTGT‑ACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGAtt                                                                                                                                                                        <  2:197874/251‑1 (MQ=255)                                                               tACTGGCTGTGGGTCGGTATTGATGGCTTTGT‑ACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGAtttt                                                                                                                                                                      >  1:43435/1‑251 (MQ=255)                                                                aCTGGCTGTGGGTCGGTATTGATGGCTTTGT‑ACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTc                                                                                                                                                                     <  2:233948/251‑1 (MQ=255)                                                                  tGGCTGTGGGTCGGTATTGATGGCTTTGT‑ACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCAc                                                                                                                                                                   >  1:84876/1‑251 (MQ=255)                                                                   gtcTGTGGGTCGGTATTGATGGCTTTGT‑ACTGCTCTCCCAGGATGCTACCGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGGGCTACCTGGTGCCTGGATGAATAATTTTGGCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCGTGGATTCTTCTGCCCATTGCTTACGGTGATTGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCTGGATTTTCACg                                                                                                                                                                  <  2:320240/249‑1 (MQ=255)                                                                   ggCTGTGGGTCGGTATTGATGGCTTTGT‑ACTGCTCGCCCTGGATGCTAACGGGCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCGGGTGCCGGGATGAATAATTTTGTCGAGTCGCCCGTTTTGGGGATCTTCCCGCTGCTTGGATTCTGCTGCCCATTTCGTACGGGGATGGCGATTTATCGTGTTCGCCCGGGTTGGGGATTTTTGATGTCATCATTGATGCAATTTGGCGTGATTTTCa                                                                                                                                                                    <  2:515338/249‑1 (MQ=255)                                                                    gCTGTGGGTCGGTATTGATGGCTTTGT‑ACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACgg                                                                                                                                                                 <  1:493130/251‑1 (MQ=255)                                                                        tgGGTCGGTATTGATGGCTTTGA‑ACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACggcagg                                                                                                                                                             >  1:130881/1‑251 (MQ=255)                                                                                    taTGGCTTTGT‑ACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGTTTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGtt                                                                                                                                                 >  2:427471/2‑251 (MQ=255)                                                                                      tGGCTTTGT‑TCTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTAGCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTc                                                                                                                                                <  2:365739/250‑1 (MQ=255)                                                                                          tttGT‑ACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTCCCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCtt                                                                                                                                           >  1:171841/1‑251 (MQ=255)                                                                                                        cccAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTAGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑Tc                                                                                                                              >  1:28863/1‑250 (MQ=255)                                                                                                            ggATGCTCACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGAGCCTGGATGACTAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCCTGCCG‑TCAAGCg                                                                                                                         >  2:347075/1‑251 (MQ=255)                                                                                                             gATGCTAACTGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCGCGGGTTGGGGCTTTTTGATGGCATCATTGATGCAATTTGGCGTGCTTTTCACGGCAGGCATCACGCTGTTCCCCTTTTTCATGCCG‑TCAAGCGt                                                                                                                        >  2:393732/1‑251 (MQ=255)                                                                                                                 cTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGt                                                                                                                    >  1:463945/1‑251 (MQ=255)                                                                                                                   aaCGGTCCTTCCAATCCGTTAATGAAACGGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTcc                                                                                                                  <  2:84876/251‑1 (MQ=255)                                                                                                                     cGGTCCTTCCCATCCGTTAATGACACTGCTGTCAGTGCTACCTGGTGCCTGGATGAATAATTTCGTCGGGTCGCCCGATTTGTGGCTCTTCCCGCTGCTGGGATTCTTCTGCCCCTTGCCTACGGTGATGGCGATTTATCGTGGTGGGTCGGGCTGGGGATTTTTGATGGCATCATTGATGCGATTTGGCGTGATTTTCACGGCAGGCATACCGCTGTTGCCCTTAGTCATGCCG‑TCAAGCGTGAGTCCgg                                                                                                                >  2:525301/1‑250 (MQ=255)                                                                                                                         ccTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGACTAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTTATGGCATCATTGTTGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGGTCA‑GCGTGTGTCCGAtctc                                                                                                            >  2:463704/1‑251 (MQ=255)                                                                                                                               aaTCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCt                                                                                                      <  2:503617/251‑1 (MQ=255)                                                                                                                               aaTCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCt                                                                                                      >  1:435632/1‑251 (MQ=255)                                                                                                                                   cGTTAATGAAACTGGTGGCCGTGCTAAATGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCTGACg                                                                                                  >  2:223482/1‑251 (MQ=255)                                                                                                                                                ggtggCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCTAGTCGCCCGTTTTGGGGATCTTCCCGCTGCTGTGATTCTTCTGCCCAGTGCGTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTTGGGATTTTTGATGGCATCAGTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCTTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGTCAGTa                                                                                     <  2:390748/251‑1 (MQ=255)                                                                                                                                                 gtggCAGTGCTTCCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTTATGGTGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCGGTTCCCTTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTAc                                                                                    <  2:317536/251‑1 (MQ=255)                                                                                                                                                   ggCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTATTCTGCCCCTTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGCTTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCCAGCGTGCGTCCGATCTCCAGCCTGACGTTGTGGGCAAGTACtt                                                                                  >  1:290215/1‑251 (MQ=255)                                                                                                                                                    gCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTc                                                                                 <  1:288174/251‑1 (MQ=255)                                                                                                                                                            aCCTGGTGCCTGGATGAATAATTTTGGCGAGTCGCTCGTTTTGTGGTTCTTTCCGCTGCTTGGATGCTTCTGCCCATTGCTTACGGTGATGGCGAGTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATGTGGCGTGATTTTCACGGCCGGCAGCTCGCTGTTCCCCTTTGGCAGGCCG‑TCAAGCGTGAGTCCGATTTCCAGCCTGACGTTGTGGGACAGTGCTTCCAGTCa                                                                           <  2:126949/249‑1 (MQ=255)                                                                                                                                                                ggTGCCTGGATGAATAATTTTGTCGAGTCTCCCTTTTTGTGGATCGTCCCGCTGCTGTGATTCTTCTGCTCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCAGTGATGCAATTTGGCGTGATTTTCACGGCAGGTATCACGCTGTTCCCCTTTGTCATGCCG‑TCAATTGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTg                                                                       <  1:443834/249‑1 (MQ=255)                                                                                                                                                                       ggATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTTCCCTTTGTCATGCCG‑TCAAGCGTGGGTCCGATCTCCAGCCTGCAGTTGTGGGACAGTAATTCCACTCAGCTGActccgagc                                                              >  2:82460/1‑244 (MQ=255)                                                                                                                                                                           gAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCAtt                                                           <  1:347075/250‑1 (MQ=255)                                                                                                                                                                                  tttGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTgg                                                    <  2:463945/250‑1 (MQ=255)                                                                                                                                                                                       cGAGTCGCCCTTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCATCCTTACGTTGTGGGACAGTACGTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATc                                               <  2:43435/250‑1 (MQ=255)                                                                                                                                                                                          gTCGCCCTGTTTGTGGATCTTTCCGCTGCTGGGATGCTTCTGCCCATTGCTTACGGTTATCGAGAGTTATCGTGGACGCCCGGGTTGGGGATTGTGGAGGTCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGTATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATTTTCAGCCTGACGGTGCGGGACAGTCCTCCCAGTCAGCTGACGTTGAGCTCTATGTTGGTAATCGTgt                                           <  2:275863/251‑2 (MQ=255)                                                                                                                                                                                             gCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTg                                         >  1:252196/1‑250 (MQ=255)                                                                                                                                                                                              cccGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGat                                       <  2:435632/251‑1 (MQ=255)                                                                                                                                                                                                       tgGATCTTCCCGATGCTGGGATTATTCTGCCCATTGCTTACGGTGATGGCGATTTCACGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTACGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATATTTTTGcc                              >  2:531289/1‑251 (MQ=255)                                                                                                                                                                                                            cTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATATTTTTGCCCATtg                         >  2:515399/1‑251 (MQ=255)                                                                                                                                                                                                              tCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATATTTTTGCCCATtgtg                       >  2:168926/1‑251 (MQ=255)                                                                                                                                                                                                               cccGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATATTTTTGCCCATtgtg                       <  1:170430/250‑1 (MQ=255)                                                                                                                                                                                                                 cGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATATTTTTGCCCATTGTGTTg                    <  1:530409/251‑1 (MQ=255)                                                                                                                                                                                                                          gATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATATTTTTGCCCATTGTGTTGCTCTACAct           <  1:223482/251‑1 (MQ=255)                                                                                                                                                                                                                                   gCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATATTTTTGCCCATTGTGTTGCTCTACACTCTCTGGAGc  >  1:38775/1‑251 (MQ=255)                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                  GTTCACAGCTGGCGACCAAACGCGCTGCACTGTTGGTGATGCTGTGCTTTTTGCTGGCGGGTTACTGGCTGTGGGTCGGTATTGATGGCTTTGT‑ACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTGACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCG‑TCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATATTTTTGCCCATTGTGTTGCTCTACACTCTCTGGAGC  >  NC_000913/1039891‑1040366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑