| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,636,925 | G→C | R77P (CGC→CCC) | creC → | sensory histidine kinase CreC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,636,925 | 0 | G | C | 98.3% | 185.0 / ‑2.8 | 60 | R77P (CGC→CCC) | creC | sensory histidine kinase CreC |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (34/25); total (34/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.33e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.52e-01 | |||||||||||
GAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTCGC > NC_000913/4636684‑4637170 | gAGGGGACGGTAATGCGTATCGGCATGCGGTTGTGGCTGGTCTAGTTTTTACTGGTGGCGGTGGCAGCCTGGGTCGTATTGGCCAATTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGAACCAACGCATGGGCAACTGGCTCTGGCGTTTAATCAGCTACAACATCCCCCGttt < 2:86899/249‑1 (MQ=255) aTGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCgg < 2:142299/251‑1 (MQ=255) tATCGGCATGGGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTTGCAGCCTGGTTCCTACTTGCCCTTTTTGTCAAAGACGTTAAACCCGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCCCAACGTTGCGGGCGGAGCTGGGGCGGCCCGCTTTGCTATCTGGGGACCAAAAGACTTGGCAACTGGCGCAGGAGTTTAAACAGCTCAAACCTCCCCCGTTTTCCGCCAATATCGGTGGc > 2:348978/1‑250 (MQ=255) aTCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGGACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCCACGCATGGGCCACTGGCGCCGGCGTTTAATCAGCTACCACATCCCCCGTTTCGCGCCAATATCGGTGGcct > 1:233772/1‑249 (MQ=255) cATGCGGTTGTTGCTGGGCTTTTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATTGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACa < 2:90064/251‑1 (MQ=255) gCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCCACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGGGGCATTAACaa > 1:354421/1‑249 (MQ=255) cGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGGGGCAGCCTGGTTAGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGCGCTGGCGCGTCCCGCTTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTACTCGCCAATAACGGTGGCATTAACAAAgg > 1:22255/1‑250 (MQ=255) gttgttGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTTATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATTGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTGGCGCCAATATCGGTGGACTTAACTAAGTgc > 2:254503/1‑251 (MQ=255) tttACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGTCCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTc < 1:330320/250‑1 (MQ=255) aCTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGGGGCATTAACAAAGTGCGCCATGAATATC‑ATGTCtat > 2:125806/1‑250 (MQ=255) ggggcgggggcAGCCTGGTTCGTACTGGCCATGTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCGACGTGGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGGTTAATCAGCGACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGAc < 2:321785/249‑1 (MQ=255) ggcggaggcAGCATGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGCCACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGGCCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGGGCGCAATGAATATC‑ATGTCtatagaaccg > 2:250441/1‑245 (MQ=255) gggcAGCCTGGTTCGTACTTGCCATTTTTGTCAAAGAAGTTAAACCGGGCGGGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGGGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTTGCGCAGGCGTTTAATCAGCAACAACATCCCCCGTTTCGCGCCAATATCGGTGGCTTTAACAAAGTGCGCTATGAAGATC‑ATGTCTATATATCCGATgcg < 2:177884/250‑1 (MQ=255) cTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACCAATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACTCCCCCCGTTTCCCCCCAATATGGGGGGCATAAACAAAGGGCGACATGAATTTC‑ATGATTATATGACCGTTgcgaggggc > 1:227260/1‑244 (MQ=255) tGGTTCGTAATGGCCATTTTTGTACAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGAACGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCAAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCGGTTTCGCGCCAATATCAGTGGCATTAACAAAGAGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCa > 1:313434/1‑250 (MQ=255) ggTTCGTACTGGCCATTTTTGTCAAAGAAGATAAACCGGGCGTAACAAGAGAAACGGAGGGGACGATGATCGACACCGCAACGTTGCTGGCGGAGCTGGAGCGTCCCGATTTGCTCTATGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACACCATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAACATGCGCAATAAATATC‑ATGTCTATATGCCCGCTGCGCAGGGCaa > 1:79243/1‑250 (MQ=255) tACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTg > 1:271437/1‑251 (MQ=255) tGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGAGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCCAAGTATTGTTc > 2:158971/1‑251 (MQ=255) ggCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCg < 2:112617/251‑1 (MQ=255) tCAAAGAAGTTAAACCGGGCGTGCGACGAGCCACGGCGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGAATTGCTCTCTGGGGACCCAACGCCTGGGCAACTGGCGCAGGCGATTAATCAGCTACAACATCCCCCGTTTCGCGCCAATCTCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATATCTATCTGACCGATGCGCAGGGCAACGTCTTTTTCAATTCGGCAAAt > 2:60604/1‑251 (MQ=255) cAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATa < 1:158971/251‑1 (MQ=255) aaaaGAAGTTAAACCGGGCGTGCGATGAGAAACGGAGGGGACGATGATCGACAACGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAAATGGCGCAGGCGTTTAATCAGCTACAAAATCCACCATTTCGCGACAATATCAGTGGCATTAAAAAACGGCGCAATGAATATCCAT‑TCTATATGACCGATGCGATTGGGAAAGTATTGTTCGATACGGCaaaa > 2:392379/2‑249 (MQ=255) aaaGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATa > 1:55189/1‑250 (MQ=255) cGGGCGAGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAACGTATTGTTCGATTCGGCAAATACAGCCGTTGGAc > 2:222610/1‑249 (MQ=255) gAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTcg < 1:106760/251‑1 (MQ=255) gCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTg > 1:378733/1‑251 (MQ=255) gAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGGCCCGATTTGCTCTCTGGGGCCCCAACGCCTGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGGTTCCCGCCAATATCGGTGGCATTAAAAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTCTTGTTCGATTCGGCAAATAAAACCGTTGGACAGGATTCTTCGCGCTGGAATg > 2:43849/1‑250 (MQ=255) aCGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTg > 1:385529/1‑251 (MQ=255) tGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGTTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCGAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGagta < 2:207488/226‑4 (MQ=255) tGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAACGCCGTTGGAAAGGATTATTCGCGCTGGAATGACGTCTGGCt > 1:24935/1‑250 (MQ=255) tGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGatta > 1:207488/1‑226 (MQ=255) cacCGCCACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGTCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGCCGTCTGGCTAACGTTGc < 2:354421/251‑1 (MQ=255) cacCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGc < 1:254503/251‑1 (MQ=255) acCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGAAGTCTGGCTAACGTTGCg > 1:100522/1‑251 (MQ=255) ccGCATCGTTGCTGGCGTAGCTGTCGTGTCCTGATTTGCTCTCTGTGGACCAAACGCAGGGGCAACTGGCGCAGGCGGTTAATCAACTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTAGATTACCGAGGCGCAGGGCAAAGTATTGTGCGATTTGGCAAATAAAGCCGTTTGACAGGGGGATTCGCGCTGTAATGGCGTCTTTCTAACGTTGc < 2:350915/249‑1 (MQ=255) cGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTg > 1:106906/1‑251 (MQ=255) cAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATGCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCATGGCAAAGTATTGTTCTATTCGGCAAATAAAGTCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGt < 1:520686/251‑1 (MQ=255) ttGCTGGCGGAGGTGGCGCGTCCCGATTTGCTCTCTGGGGACCTAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAGGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGt < 2:515490/250‑1 (MQ=255) gAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTc > 2:15825/1‑173 (MQ=255) gAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTc < 1:15825/173‑1 (MQ=255) ggctgggccgTCCTGATTTGCTCTCTGGGGGCCCAACGCATGGGCAACGGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTGCGCGCCAAGATCGGTGGCAGTAACAAAGTGCGCAATGAATATC‑ATGTCGATATGACCGATGCGCAGGGTAATGTAGTGTTCGATTGGGCGAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGGCGTCGGGCGAACGTTTCTTGGTCAGGATAGTgcgcgc < 2:256937/243‑1 (MQ=255) gATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGAATAAAAAAAGGGCGCAATGAATATA‑ATGTCTATATGACCGATGCGAAGGGCAAGGTATTGTTCGTTTCGGCAAATAAAGCGGTTGGACAGGATTATTCGCGCTGGAAGGACGTCTGGCTACCGTTGCGTGGTCAGAAGGGGGCGCGCAGAACGTGGCaaa > 1:393153/1‑250 (MQ=255) aTTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAACGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAAt > 2:188441/1‑251 (MQ=255) ttGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATc < 1:60125/250‑1 (MQ=255) tctGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCg > 2:92100/1‑250 (MQ=255) tGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATc > 2:256674/1‑251 (MQ=255) ggggACACACCGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATTACGTCTGGCTAACGTTTCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAATTCCTGCCGATcc < 2:464348/251‑1 (MQ=255) gggACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATccc < 1:250441/251‑1 (MQ=255) aTGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCtgtg < 1:125806/251‑1 (MQ=255) aTGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCCCCAGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGAAGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCGGATCCCGAAGGTTCtgtg > 1:482917/1‑251 (MQ=255) gcacctggcgctggctgtaaaTCAGCTACAACATCCCCCGTTGCGCGCCAAAATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGAGGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCTCGAAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGatgt < 2:394616/232‑1 (MQ=255) aaCTGGCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAACGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGatgtat > 1:433249/1‑251 (MQ=255) cgggCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTGCTCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGTCAAATAAAGCCTTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGTGGCGCGCAGCACGTTGCAAAAGCCTGCCGATCCCGAAAGTTCTGTGatgtatgt < 1:521559/249‑1 (MQ=255) ggCGCAGGCGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTg > 1:234545/1‑251 (MQ=255) cGTTTAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCg > 1:135215/1‑251 (MQ=255) tAATCAGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGAtt < 1:375844/250‑1 (MQ=255) aGCTACAACATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGAc < 1:363701/251‑1 (MQ=255) caacaTCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGCATATC‑ATGTCTATATGACCGATGCGCCGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTc > 2:266634/1‑251 (MQ=255) aacaTCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTcg < 1:122848/251‑1 (MQ=255) acaTCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTcgc > 1:416867/1‑251 (MQ=255) | GAGGGGCCTGTAATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATC‑ATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTCGC > NC_000913/4636684‑4637170 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |