| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,457,105 | 0 | A | G | 24.6% | 111.3 / 10.1 | 62 | I441V (ATC→GTC) | mpl | UDP‑N‑acetylmuramate‑‑L‑alanyl‑gamma‑D‑glutamyl‑ meso‑2,6‑diaminoheptanedioate ligase |
| Reads supporting (aligned to +/- strand): ref base A (11/35); new base G (14/1); total (26/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.32e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCGCTAACTCGCGCAGATACTGGAAAAT > NC_000913/4456858‑4457355 | ggAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATcc < 2:270754/251‑1 (MQ=255) ccATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGGTTTTGG‑GGGATCCATCAGAAACTGCTGGA‑t > 1:23601/1‑251 (MQ=255) ccATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGGTTACTCAGAAAATGCTGGA‑t > 1:62658/1‑251 (MQ=255) cATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGGTCCCACAGAAAATGCTGGA‑Tg > 1:192660/1‑251 (MQ=255) ggATCTGCAAAGACGATCTGGCACCTTCATGAGGTCGGGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCGGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCGCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCgaag < 2:495589/251‑1 (MQ=255) aTCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTTGGGGGGTCCCACAGGAACTGCTGGG‑TGGGCGGGCgaagg > 1:284761/1‑249 (MQ=255) gCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGGTCCATCAGAAACAGCTGGA‑Tggggggggggagaagggg > 1:359935/1‑236 (MQ=255) aaaGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTACGGCGGCAACCGTCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGa < 2:423144/251‑1 (MQ=255) cGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTTGTGGGGTCCCCCCGAAACTGCTTGA‑TGGGGTggggaggacagcgggagccg > 1:327281/1‑233 (MQ=255) tGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑GTTTGGTGGGGTCCCTCAGAAACAGCTGGG‑TGGGCTGGCGGAGAAAGCGGAAGCCgcgc > 1:252767/1‑249 (MQ=255) ggCACCTTCATTAGGTCGTGCCGATGAAGTCTTCCTGCTGCAGCCGGCGCATATTCCGTGGCAGGTGGAAGAAGTGGCAGAAGCCTTCGTTCAGCCTGCACACTGGAGTGGCGAGGTGGATACGCTGGCAGATAGGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTGTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCcgc < 2:41342/246‑1 (MQ=255) cccTTCATTAGGTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAGAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCTG‑TTTTGGTGGGATc < 2:331539/198‑1 (MQ=255) aCCTTCATTAGGTCGTGCAGATGAAGTCTTACTGCTGCAACCGGCGCATATTCAGTGGCAGGAGGAAGCAGTGGCAGAAGACTGCGTTCAGCCTGCAAACTGGAGTGGCGATGAGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGATTTGGGTGGGATAC‑TCAGAAACTGGCGGG‑TGGGCTGGGGGAGAAGGCGGGAGCcggcccggaa > 2:515595/1‑242 (MQ=255) ccTTCATTAGGTCGGGCCGGTGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGTCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAAtt < 1:350523/251‑1 (MQ=255) tAGGTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTTGTGGGGTCCATCAGAAAACGCTGGGGTGGG‑TGGGGAAGAAAGCGGGGGCCGCGCAGGAAATCGG‑ccct > 2:517231/1‑249 (MQ=255) ggTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAg < 1:292606/251‑1 (MQ=255) gTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTTGATTCGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGTCGGAAGCCGCGCAGTAATTCGG‑CCTTAGc < 2:284761/251‑1 (MQ=255) ttCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGGACCCTCAGAAAATGCTGGG‑TGGGGTGGGGGAGAAGGCGGAAGCCGCGCCGGAATTCGG‑GCTTAGCCCGATATAGTATGCGt > 1:79125/1‑250 (MQ=255) tCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTa < 1:109701/250‑1 (MQ=255) accTGCTGCAACCGGCGCATGTTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACTGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATAGAGTATGCGt < 2:29775/248‑1 (MQ=255) ccTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGGGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCGGGCGAAGAAGGCGGAAGCCGCGCAGTAATGCGG‑CCTTAGCCAGATATAGTATTCGTAgg < 2:229259/251‑1 (MQ=255) gcAACCGGCGCATATTCCTTGGCGGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGTTATAGTATGCGTAGGCCGGAt < 2:287944/251‑1 (MQ=255) cAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGGAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATa < 2:456462/251‑1 (MQ=255) aaCCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCCGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTTGTGGGATGCATTAGAAACCGGTGGG‑TGGGCTGGCGAAGAAGGGGGAAGCCCCGCAGGAAATTGG‑CCCTAGCCAGATATAGAATGGGTAAGCCgggta > 1:23356/1‑247 (MQ=255) aCCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGG‑TGGGGTGGCGAAGAAGGCGGGAGGCGGGCAGGAATTCGG‑CCCTTGCCAGATATAGTATGCGTAGGGCGGATa > 1:37460/1‑249 (MQ=255) cGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGc < 1:368224/251‑1 (MQ=255) gcATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTc < 1:216509/251‑1 (MQ=255) atatTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGCCGTTCAc < 1:134935/251‑1 (MQ=255) gaagtggcagaagCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGGGGGGTCCATCAGAAAATGCTGGG‑TGGGGTGGGGGAGAAGGCGGGAGCCGCGCCGGAAATCGGGCCTT‑GCCCGATATAGTATGCGGAGGCCGGGTAAGGCGGTCCAGCCCCATCCGGCCttttggc > 1:452180/1‑247 (MQ=255) gaagCCTGCTTTCAGCCTGCACACTGGGGTGGCGATGTGGATCCGCTTGCAGATATGGTGGTGAAAACCGCTTAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGTTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATTTAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCt < 1:74855/251‑1 (MQ=255) aGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGTTCCATCAGAAACTGCGGGG‑TGGGGTGGGGGAGAAGGGGGGAGCCGGGCAGAAAATTGG‑CCATAGCCAGATATAATCTGGGCAAGCCGGGTAAAGCGTTTACGCCGCATCCAGCAATTGGGGATAATGCCTGGTGGGACGcctg > 1:425121/1‑248 (MQ=255) gCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGTATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAATAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCGGATATAGTATGCGTAGGCCGGATAATGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGc < 1:474946/250‑1 (MQ=255) tGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCCGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGGGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCCGATATAGTATGCGTAGGCCGGGTAAGGCGTTCACGCCGCATCCCGCATTTGAGCATAGTGCCCGGTGGGACGCTTGATGCGGCTTAt > 1:495679/1‑251 (MQ=255) ggTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAg < 2:452180/250‑1 (MQ=255) aTGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTTGTGGGGGCCATCAGAAACTGCTGGA‑TGGGCTGGCGGAGAAGAGGGGAGACGCGCAGTAATTCGG‑GCCTAGCCCGATATAGTATGCGTAGGCCGGGTAAGGCGGTCACGCCGCATCCGGCATTTGAGCATAATGACTGATTCGCCGCTTGATGCGTCTTATCAAGcccac > 1:81699/1‑247 (MQ=255) aTGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACa < 1:271925/251‑1 (MQ=255) aTGTGGATACGCTGGCAGATAGGGGGGTGAAAACCGGTCAGCCTGGCGACCATATTCTGGGGATGAGAAACGGCGG‑GTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCTTGATGCGACGCTTGATGCGTCTTATCAGGCCTACa < 2:327281/251‑1 (MQ=255) tgtgGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGGTCCATCAGAAAACGCTGGG‑TGGGCGGGCGGAGAAGGCGGAAGACGCGCCGAAATTTGG‑CCTTAGACCGATATAGAATGAGGAGGCCGGATAAGGGGTTCACGCCGCATCCGGCATTTGTGCATAGTGCCTGCTGCGACGCCTGATGCGGCtttacaagcctaccg > 1:333870/1‑238 (MQ=255) gATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGGTCCATCCGAAACTGCTGGG‑TGGGCTGGCGAAGAAGGCGGAAGGCGCGCCGGAATTCGG‑CCTTAGCCCGATATAGTATTCGGAAGGCGGATAAGGCGGTCACGCCGCCTCCCGCATTTGAGCATAGGGCCTGATGGGACGCTTGATGCGTCTTTTCCGGCCTACAggggc > 1:432349/1‑248 (MQ=255) cTGGCAGATATGGTGGTGAAAACCGCTCAGCATGGCGACCATATTCTGGTGATGAGCAACGGCGG‑ATTTGGTGGGGTCCATAAGAAAATGCTGGG‑TGGGGTGGCGCAGAAGGGGGGAGCCGGGCAGAAATTTGG‑CCCTAGCCAGATATAGAATGAGTAGGCCGGGTAAGGGGGTCAAGCCGCCTCCGGCATTTTAGCATAGAGGCTGTTGCGAAGCTTGATGCGTCTTATAAGGCCTAccggggcaacgt > 1:225034/1‑239 (MQ=255) ggCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATc < 1:405110/251‑1 (MQ=255) aGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCgg < 1:185311/251‑1 (MQ=255) tatGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGGGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAAGCCGGATAAGGCGTTCACGCCGCCTCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGGCTTATCCGGCCTACAGGTGCACCGTATCCCGCa > 1:154803/1‑250 (MQ=255) ggtggtGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCAGCAAAc < 1:148067/250‑1 (MQ=255) ggtgAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAATCTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCAt < 1:172163/250‑1 (MQ=255) cGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATca < 1:517231/251‑1 (MQ=255) cAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATcaaca < 1:450051/250‑1 (MQ=255) tGGCGACCATATTCTGGTGATGAGCAACGGCGG‑GTTTGGGGGGAGCCATCCGAAACTGCTGGG‑GGGGCTGGGGGAGAAAGGGGGAGCCCCGCAGGAAATCGG‑CCTTTGCCAGGAATAGTATTCGGAGGCCGGGTAAGGCGGTCACGCCCCATCCGGCATTTGTGCCTAATGCCCGTTGTGACCCTTTAAGCGTCTTTTCAGGCCTACCAGTGCACCCCATCCGGCAAACCAAACtataataccccaccaa > 2:424334/1‑235 (MQ=255) gaccagatattGGTGATTAGCAACGGCGG‑TTTTGGTGGTGTCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCTG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTGGATGCGTCTTATCAGGCCTACAGGTGGGCCGTAGCCGGCAAACCATACTTACATCAACAACTAAAATTa < 2:225034/241‑1 (MQ=255) aCCATATTCTGGTGATGATCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCTTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTTCACCGTAGCCGGCAAACCATACTCACATCAACAACGAAAATTAc < 2:81699/251‑1 (MQ=255) cATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTAccc < 1:424334/251‑1 (MQ=255) tatTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAAtt < 1:321218/245‑1 (MQ=255) atTCTGGGGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAGCCATACTCACATCAACAACGAAAAGTACCCtt < 2:23601/250‑1 (MQ=255) ggTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGtt < 1:89418/249‑1 (MQ=255) cggcgg‑TTTTGGTGGGGTCCCTCAAAAACTGCTGGA‑TGGGCTTGCGAAGAAGGCGGGGACCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGGATGCGTAGGCCGGGTAAGGGGTTTACGCCGCATCCGGGATTTGTGCATAGTGGCTGATGCGACGCTTGCTGTGGCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCAAACTCACATCAACAAAGGAAATTACCCTTCGTTCTCCGCtcaatccc > 2:418360/1‑244 (MQ=255) gg‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTCTCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCGCTAACTCgcgc > 2:509031/1‑249 (MQ=255) tgggtggGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCGCTAACTCGCACAGATa < 1:150869/248‑1 (MQ=255) ggtggGATGTATCAGAAATTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCATTAATTCGG‑CCTTAGCTAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGGGCCGTATGCGACGCTTGTTGCGTCGTATCAGGCCTATAGGTGCGCCGTATCCGGCAAACCAGACGCACATCAACAACGAAAATTACCCTTCGTGCTCCGCTACCTCGCTCAGATACTg < 2:517538/251‑1 (MQ=255) ggATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGCTATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCGCTAACTCGCGCAGATACTGGaa > 2:411128/1‑250 (MQ=255) ggATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCGCTAACTCGCGCAGATACTGGaaa < 1:179373/251‑1 (MQ=255) gATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCGCTAACTCGCGCAGATACTGGaaa > 2:385032/1‑250 (MQ=255) gATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGGAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATCGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCGCTAACTCGCGCAGATACTGGaaa > 2:400896/1‑250 (MQ=255) atccatccGAAACTGATGGA‑CGGGCTTGCGCAGAACGCGGAAGCAGCTCAGTAAATCGG‑TCTTAACCCGACATAGTATGAGTACGCCGGATACGACGTTCACGACGCATCCGGCATTTAAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACCGGTGCACCGTCTCCGGCCAACCCTACTCCCATCAACAACGAAAATTACCCTTCGTTCCCCGCTAACTCGCGCCGATCCTggcaact > 2:318968/1‑246 (MQ=255) | GGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGG‑TTTTGGTGGGATCCATCAGAAACTGCTGGA‑TGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGG‑CCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCGCTAACTCGCGCAGATACTGGAAAAT > NC_000913/4456858‑4457355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |