| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,177,748 | 0 | C | A | 29.2% | 47.9 / 19.0 | 49 | E55* (GAG→TAG) | nudF | ADP‑sugar pyrophosphatase |
| Reads supporting (aligned to +/- strand): ref base C (29/5); new base A (0/14); total (30/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.41e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TGGTGCCCCCCGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAA > NC_000913/3177499‑3177991 | tGGTGCCCCCCGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTc > 1:389995/1‑250 (MQ=255) ggtcccccccGGGCTTGCCAGGAAACTTAACCCCGTTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTGCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCaa < 1:50616/247‑1 (MQ=255) ccccccGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCCCAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑t > 2:138463/1‑251 (MQ=255) acCGGATTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAACAA‑TTTCCCGCCGCACCTCATGACTCAtttt > 2:192792/1‑250 (MQ=255) tGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTg > 2:222045/1‑251 (MQ=255) aacacgccgctcttcctatctcccctTCAACCGCTCCGCGACGGGCAACATCTCCCACCCTTCCCCCCTCTTCAATCCCCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CACAACCAGCACAACTTCATCACGCACTGGGACAAAGGGAAGCAAGACT‑GCGGCGTGC‑CCGCTCAAAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAAt < 2:125223/227‑1 (MQ=255) tGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACCTCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCAGTTGAATAGACg > 1:78430/1‑250 (MQ=255) cTATCAGCCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCCAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATg > 2:26232/1‑250 (MQ=255) tCAGTCTCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCACGTTGAATAGACGATGACg > 1:154499/1‑250 (MQ=255) ccGCCTCTTCAATCGCTTCGCGACGGACAACCTCTTCCACCCTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGAGCTCAAAAA‑TTTCCCGCCGCCCCTCATGACTCATGTGCCCGTTGAATAGACGATGACGAAATCt > 2:357224/1‑250 (MQ=255) cccgctccaaccGCTTCGCGCCGGGCAACACCTCCCCCTCTTCCCCCCTCTTCAAACACCCCGGCACCCTCCTCCAGTAGCAAAGGGTTTGCGCGGGGGTCGTACGCGGCAATCCGAATCTG‑CAAAACCAGCACAACTTCATCCCGCACTGGTTCAAAGGGGAGCAGGCCT‑GCGGTGGGA‑CCGCCCTAAAAAA‑TGTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCtata < 2:177991/240‑1 (MQ=255) ccTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAAt > 1:125223/1‑230 (MQ=255) cAATCGCTCCGCGACGGGCAACATCTTCCACACTTTCCCCCTCTTCAATCACCCCGGCAACCATCTCCAGTAGCCAGGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCCCGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTAAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATc < 1:4799/250‑1 (MQ=255) gACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGaaaaaa > 1:129749/1‑249 (MQ=255) aCGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGc > 1:248794/1‑251 (MQ=255) aCCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCa > 2:79013/1‑250 (MQ=255) aaTCATCCCGGCAACCATCTCCAGTAGACAAGGGGTTTCGCTGGTGTCGTAAGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAGGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCAGCACCTCCTGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCt > 2:181713/1‑250 (MQ=255) aaTCATCCAGGCAACTATCCACAGTAGACATGGGGTTTCGCTGGTGTTGTACGCGGCAATCCGA‑TCTGTCTCAACCAGCACAACTTCATCCCGCACGGGGTAAAAGGTTAGCAAGACT‑GCGTCGTGC‑CCGCGCTAAAAAA‑TTACCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTa < 2:210959/251‑1 (MQ=255) atcatcCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGa > 2:90283/1‑180 (MQ=255) accaccccGGCAACCATCCCCAGTAGCCAAGGGTTTTCGCGGGTGTCGTCCGCGGCAATCCGAATCTG‑CTAAACCAGCACAACTTCATCCCGCACGGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTAAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGa < 1:90283/175‑1 (MQ=255) acccacctcCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAGATCtat < 1:139883/179‑1 (MQ=255) aaCCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCtat > 2:139883/1‑185 (MQ=255) aGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACggg > 1:90339/1‑251 (MQ=255) aGCCAAGGGGTTTCGCTGGTGTCGTACGAGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCACAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATCGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAACCGCGATAAAGTGTTTCTCGTGCAATAATTTCT‑CACTAGTTTTTGCCAAATGTAAAggg > 2:280914/1‑251 (MQ=255) ccAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGc > 1:38440/1‑250 (MQ=255) gTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTtct > 1:311582/1‑201 (MQ=255) tCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTgg > 1:387235/1‑251 (MQ=255) cgctgggttcgtcggcgGCAATCCAAATCTC‑CCCAACCAGCACAACTTCACCACGCACGGGGTCAAAGGGTAGCAAGACC‑GGGGCGTGC‑CCGCGCTAAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGc < 1:298717/237‑1 (MQ=255) gtCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGc > 1:336076/1‑250 (MQ=255) cgcgGCAACCCGAATCTG‑CTCAATCACCACACCTCCATCCCGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTAAAAAA‑TTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTa < 1:410955/251‑1 (MQ=255) gcgGCAATCCGACTCTG‑CTCCATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTa > 2:176469/1‑250 (MQ=255) gcgGCAATCCGAATTTG‑CGCAATCACCACAACTCCACCCCCCACTGGGTAAAAGGGTAGCAAGCCG‑GCGGCGTGC‑CCGCCCTAAAAAA‑TTTCCCGCCGCACCTCATGACTCAttt < 1:402949/115‑1 (MQ=255) gcgGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCAttt > 2:402949/1‑115 (MQ=255) ggCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATg > 1:469686/1‑251 (MQ=255) g‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGCATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAAt > 1:529938/1‑250 (MQ=255) gcacAATCAGCACACCTTCATCCCGCACTGGGTCAAAGGGTAGCAAGACT‑GGGGCGTGC‑CCGCGCTAAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTa < 1:222045/245‑1 (MQ=255) cAGCACAACTTCATCCCGCACGGGGTCAAAGGTTAGCAAGACG‑GCGGCGTGA‑CCGCGCTAAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAAtt < 1:49768/251‑1 (MQ=255) aCTTCATCACGCACTGGGTCAAAGGGTAGCATGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACACATTTGCCCGTTGAATAGACGATGCCGAAATCTATAAAGATCTAATGCAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAAtgtg > 2:122684/1‑251 (MQ=255) aCTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GGGGCGGGA‑CCGCGCTAAAAAT‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTGCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAAtgtg < 1:33173/251‑1 (MQ=255) caccacgcgcggggTCAAAGGGTAGCAAGACT‑GCGGCGTGC‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAAt < 1:484727/239‑1 (MQ=255) acgcacgagcgggtacAAAGGGTAGCAAGACG‑GCGG‑ATGAACCGCG‑TCAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGGCCTGGCACTAATAGTGAATTAAATGTGAAtt < 2:452936/236‑1 (MQ=255) atcaCGCACTGAGACAAAGGGCAGCAAGACT‑GCGGCGTGA‑CAGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAACAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TAGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAAttt > 2:494557/1‑251 (MQ=255) gCACTGGGTCAAAGGGTAGCAAGCCT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTCTAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCg > 2:465096/1‑251 (MQ=255) cTGGGTCAACGGCTAACAAGACT‑CCGGCGTGA‑CCGAGATTACAAA‑TTCCCCGCCGAACCTAATGACTACTTAGCCAGTTGAATCGACCATGACGACATCCATAAAAATCTACTGAAAAACAGCCGCGATAAAGTGTTTCTCGTGCCATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCCTTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACg > 2:534483/1‑251 (MQ=255) ggTCAAGGGGTAGCAA‑ACTTGGGGAGTGA‑CCGCGCAAAAAAA‑TTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTGTTTGCCAAATGTAACGGGCAGGTTGGCTGGCTTAAGCATTGTTAATTTCCTGGCACTAATAGGGAATTAAATGTGAATTTCAGCGACGttt < 2:38440/251‑1 (MQ=255) aGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGCGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGc > 2:457266/1‑251 (MQ=255) aCT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGCTGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGCTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGACTTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGc > 2:276857/1‑249 (MQ=255) gcggca‑CCGCTCTAAAAAT‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTTAtgt < 1:138463/246‑1 (MQ=255) gTGA‑CCGCGATCAAAAT‑TTTCCCGCCGCACCTCATGACGCATGTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAAGAGTGAATTAAATGTGAATGTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATgtgt < 1:181713/251‑1 (MQ=255) ccGCGCTAAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTaaa < 1:457266/251‑1 (MQ=255) | TGGTGCCCCCCGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTG‑CTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACT‑GCGGCGTGA‑CCGCGCTCAAAAA‑TTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACA‑TCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAA > NC_000913/3177499‑3177991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |