Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	3,931,171	IS4 (–) +12 bp	intergenic (‑78/‑134)	ravA ← / → kup	regulatory ATPase RavA/K(+):H(+) symporter Kup

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3931171 =	0 (0.000)	42 (0.820)	41/482	0.3	100%	intergenic (‑78/‑145)	ravA/kup	regulatory ATPase RavA/K(+):H(+) symporter Kup
	?	NC_000913	= 4503515	NA (NA)					noncoding (1/1426 nt)	IS4	repeat region
*	?	NC_000913	= 3931182	0 (0.000)	45 (0.890)	41/480	0.3	100%	intergenic (‑89/‑134)	ravA/kup	regulatory ATPase RavA/K(+):H(+) symporter Kup
	?	NC_000913	4502090 =	NA (NA)					noncoding (1426/1426 nt)	IS4	repeat region

AGACCATCATTTCGAGGGGAAGACGGCGCTTGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTCCTCATTTGACGAAGGGAGTTTTATTCAACCTGAACGGACTAC  >  NC_000913/4503266‑4503760                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                      aGACCATCATTTCGAGGGGAAGACGGCGCTTGCGTAGAGTTACAGTACCTGCTTCGGCAAGGCAACGAGAGCTGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGACACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAc                                                                                                                                                                                                                                                      <  1:262383‑M2/251‑2 (MQ=255)   aCCATCATTTCGAGGGGAAGACGGCGCTTGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActc                                                                                                                                                                                                                                                    >  1:237573‑M2/1‑248 (MQ=255)   aCCATCATTTCGAGGGGAAGACGGCGCTTGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGGTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCAGAAAAAAATCCGGAAACAAGTTAGCGTTGCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATc                                                                                                                                                                                                                                                    <  2:216730/251‑1 (MQ=255)    ccATCATTTCGAGGGGAAGACGGCGCTTGCGTAGCGTTACAGTTCCTGATTCGGCAAGGTAACGAGAGATGAGTGCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAAGCGTAACGGGATTCCAGATCAAGAGCCTGTCCAATGTGCATTAATAAAGCCGGAAACAAGTGAGCGTTTCCTGATTCTTTCACAGTCGCTGGATCTGTCAACTGATCCTTAACTGATCGGCATTActca                                                                                                                                                                                                                                                   >  1:305050‑M2/1‑247 (MQ=255)         atTTCGAGGGGAAGACGGCGCTTGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAAGCCCCCAGAGAAGTCAGGTGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTGCCGGATTCGTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGTCATTTATCTTGGt                                                                                                                                                                                                                                               <  2:183678/250‑1 (MQ=255)            tCGAGGTGAAGACGGCGCTTGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaaggggg                                                                                                                                                                                                                                            >  1:393217‑M2/1‑239 (MQ=255)              gAGGGGAAGACGGCGCTTGCGTAGCGTTACAGTGCCTGATTCGGCAAGGCAACTAGAGGTGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCTTGTCCAATTTGCATAAAAAAATGCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCTCTGGATCGGTCTACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGgt                                                                                                                                                                                                                                         <  1:539668/251‑1 (MQ=255)              gAGGGGAAGACGGCGCTTGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggt                                                                                                                                                                                                                                         <  1:121315‑M2/251‑15 (MQ=255)                           cgcTTGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgag                                                                                                                                                                                                                            >  1:87842‑M2/1‑224 (MQ=255)                            gcTTGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGGCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagc                                                                                                                                                                                                                           >  1:532428‑M2/1‑223 (MQ=255)                               tGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGCGATGAGTTCGGCGTCGAGGTAATCCCCCAGAGTAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAACAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTAAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATc                                                                                                                                                                                                                        >  1:32532/1‑251 (MQ=255)                                 cGTGGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACCCAGCCACTGGATCGGTCAACTGATCCTTAACGGATCGGCATTActcaaagggggggtatttttctttgagccaggt                                                                                                                                                                                                                      >  2:381016‑M2/1‑218 (MQ=255)                                 cGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGCTGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaaggggggggatttttctttgagccaggt                                                                                                                                                                                                                      <  1:284070‑M2/251‑34 (MQ=255)                                  gTAGCGTTACAGTACCTGATTCGGCAAGGCACCGAGAGATGAGTTCGGGGTCGAGGTAAACCCCCAGAGAAGTCAGTGGGATACGCAGAGAATAGTAACGGGATAACAGATCAAGAGCCTGACCAAGGTGCATAAAAAAATACGGAAAAAAGAGAGCGTTTCCGGATACGTACACAGCCAATGGATCGGTAAAATGATCCTTAACTGATAGGCATTAATATTGGTTCTGGTGTTTGTAACAAACTATc                                                                                                                                                                                                                        >  2:455475/1‑248 (MQ=255)                                    aGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTa                                                                                                                                                                                                                   <  2:493127/251‑1 (MQ=255)                                    aGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTGCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTTGTGTTTGTAACAAACTATCAGCt                                                                                                                                                                                                                    <  2:42710/250‑1 (MQ=255)                                       ggtacAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGGCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGAGCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgt                                                                                                                                                                                                                >  2:527392‑M2/3‑212 (MQ=255)                                       gTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgt                                                                                                                                                                                                                <  1:158893‑M2/251‑40 (MQ=255)                                         tACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATTTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACaaa                                                                                                                                                                                                               <  2:422475/250‑1 (MQ=255)                                             gTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCTTTGCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgc                                                                                                                                                                                                          >  1:425073‑M2/1‑206 (MQ=255)                                               aCCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGCGAAGTCAGTGGGTTCCGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCCACTGATCCTTCACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTCTCAGCTACAAAAATATGc                                                                                                                                                                                                        >  1:352915/1‑251 (MQ=255)                                                ccTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatt                                                                                                                                                                                                       >  1:206728‑M2/1‑203 (MQ=255)                                                   gATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAATTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAGTATGCTc                                                                                                                                                                                                      <  2:206377/249‑1 (MQ=255)                                                   gATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTc                                                                                                                                                                                                      <  1:123457/249‑1 (MQ=255)                                                     ttCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttagg                                                                                                                                                                                                   <  1:382667‑M2/250‑53 (MQ=255)                                                       cGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGAGCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTTATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAAttt                                                                                                                                                                                                 <  2:136926/250‑1 (MQ=255)                                                                  cgatagaTGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCGTGCGCAGCCACTGGATCGGTTAATTGATCCTTAACTGATCTGCATTAATCTTGGTTCTGGTGTGTATAACAAGCTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTa                                                                                                                                                                                     <  1:31220/247‑1 (MQ=255)                                                                                  ggTCGAGGTAATCCCCCAGAGACGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatact                                                                                                                                                                     <  1:360649‑M2/251‑83 (MQ=255)                                                                                     cGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGGGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTTTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTAt                                                                                                                                                                  <  2:485488/251‑1 (MQ=255)                                                                                      gAGGTAATACCCCAGAGACGTCAGCGGGTTAAGCAGCGCATCGTAACGGGATACCCGATCAAGAGCCTGTCCAATGTGCATAACAAAATCAGGAAACAAGTGAGAGTTTCCGGATTCTTACACAGCCACTGGCTCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttatctttgagccaggttaatgcggccgcatttaggagaacgattttgccgttaatcgtgcatactgtgc                                                                                                                                                                 <  2:58185‑M2/251‑87 (MQ=255)                                                                                       aGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcg                                                                                                                                                                >  2:440300‑M2/1‑164 (MQ=255)                                                                                           aacccaccAGAGAAGGCAGGGGGTTACGAAGAGAATCTTAACGGGATACCAGATCAAGAGCCTGTCCAAGATGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTGACACAGCCACTGGATCGGTCAACTGATCCGTAACTGATCGGCAGTAATCGTGGTTCTGGTGTTTGTAACAAAGTAACAGCTACAAAAATATGCTCAATATGTGACATCAGGAGCAAAACGCGTTGTTTTATGTGGa                                                                                                                                                             <  2:352915/244‑1 (MQ=255)                                                                                                  cAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgttcatactgtgcgcttttttgtgg                                                                                                                                                     <  2:484980‑M2/251‑99 (MQ=255)                                                                                                      gaAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGttttt                                                                                                                                                 <  1:9622/251‑1 (MQ=255)                                                                                                      gaAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAAGCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCGGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGttttt                                                                                                                                                 <  2:338206/251‑1 (MQ=255)                                                                                                      gaAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCGGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTTGATTGCTTGttttt                                                                                                                                                 <  2:321674/251‑1 (MQ=255)                                                                                                       aaGTCAGTGGGTTACGCAGAGAATCGTAACGGGATGCCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGGGAGCGTTTCCGGATTCTTACACAGCCACTGGATCTGGCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAATTATCATCTGCAAAAATATGCTCAATTTGTGACAGCAGGAACAAAACGCGGTTTGTTATGTGGATTGCT‑Gttttttt                                                                                                                                               <  2:476644/251‑2 (MQ=255)                                                                                                        aGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggcca                                                                                                                                                 <  1:7551‑M2/249‑103 (MQ=255)                                                                                                                ggTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGta                                                                                                                                       <  1:42197/251‑1 (MQ=255)                                                                                                                ggTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGt                                                                                                                                        >  2:85629/1‑250 (MQ=255)                                                                                                                        agagAATCGAAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatt                                                                                                                               >  2:158893‑M2/1‑131 (MQ=255)                                                                                                                                     gggATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATACTTAACTGATCGGAATTCATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATAc                                                                                                                   >  1:76251/1‑250 (MQ=255)                                                                                                                                       gATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATAc                                                                                                                   >  1:288260/1‑248 (MQ=255)                                                                                                                                        aTACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAACTCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCt                                                                                                                                           >  1:493894/1‑223 (MQ=255)                                                                                                                                        aTACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaa                                                                                                                <  1:347106‑M2/250‑136 (MQ=255)                                                                                                                                        aTACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCt                                                                                                                                           <  2:493894/223‑1 (MQ=255)                                                                                                                                          aCCAGATCAAGATCCTGTCCAATGTGCATAAAAAAAGCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGAGCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGGATAAAGGTATACAGaaa                                                                                                              <  2:21083/250‑1 (MQ=255)                                                                                                                                          aCCAGATCAAGAGGCTGTCCAATGTGCATAAAAAAAGCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACGGGAGCGGTCAACTGAGCCTTAACTGATCGTCATTActcaaagggggtgtatttttctttgagccaggttaatgtggccgcatttaggagtacgatgttgccgttaatcgtgcatactgtgcgctggtttgtgggccaaggtactatgctcacactccatatttcatcgaaag                                                                                                              >  2:470771‑M2/1‑113 (MQ=255)                                                                                                                                          aCCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAATTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaaga                                                                                                             >  2:121315‑M2/1‑113 (MQ=255)                                                                                                                                              gATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcgtttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactag                                                                                                         >  1:183770‑M2/1‑109 (MQ=255)                                                                                                                                                      gCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTTAGCGTTTCCGGATTCGTACACTGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcaaacatttcatatttcaacgaaagactagtctatgag                                                                                                 >  2:2609‑M2/1‑101 (MQ=255)                                                                                                                                                              aaTGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCAATGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATAAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAACGAAATACTGCAAAgg                                                                                         >  2:424751/1‑251 (MQ=255)                                                                                                                                                                 gtgCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtctatgagcactgataat                                                                                       <  1:66180‑M2/250‑161 (MQ=255)                                                                                                                                                                 gggcaTAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACCCAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtctatgagcacttataata                                                                                      >  2:360649‑M2/3‑90 (MQ=255)                                                                                                                                                                   tcATAAAAAAATCAGGAAACAAGTGAGCGTTTACGGATTCTTACACAGACAATGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTAAAAACATATGCTCAATTTGTGACATCAGTCACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGTTATAAAGGTATACAGAAAAGCACAGAAATACTGCAAAGGaaaa                                                                                     >  2:454877/2‑250 (MQ=255)                                                                                                                                                                      tAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGc                                                                                 >  2:173235/1‑251 (MQ=255)                                                                                                                                                                       aaaaaaaTCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCt                                                                                >  1:541627/1‑251 (MQ=255)                                                                                                                                                                        aaaaaaTCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtctatgagcactgataataagcaatc                                                                               <  1:479219‑M2/251‑169 (MQ=255)                                                                                                                                                                         aaaaaTCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtctatgagcactgataataagcaatca                                                                              >  2:382667‑M2/1‑82 (MQ=255)                                                                                                                                                                                   aaaCAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAAcgcg                                                                                                                                                                           <  2:459733/148‑1 (MQ=255)                                                                                                                                                                                   aaaCAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAAcgcg                                                                                                                                                                           >  1:459733/1‑148 (MQ=255)                                                                                                                                                                                              cGTTTCTGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgt                                                                                                                                                                   <  1:140432‑M2/145‑85 (MQ=255)                                                                                                                                                                                              cGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgt                                                                                                                                                                   >  2:140432‑M2/1‑61 (MQ=255)                                                                                                                                                                                                 ttCCTGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTGTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTTGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACGGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACct                                                       <  1:183594/250‑1 (MQ=255)                                                                                                                                                                                                      gATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtctatgagcactgataataagcaatcattgcccgcgattaccctcgcggcgattgg                                                 <  1:208184‑M2/251‑199 (MQ=255)                                                                                                                                                                                                      gATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccggtaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatgtcaacgaaagacgagtctaggagcactgataataagcaatcattgcccgcgattaccctcgcggcgattgg                                                 >  2:496596‑M2/1‑53 (MQ=255)                                                                                                                                                                                                             acacAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTcc                                           <  1:320713/250‑1 (MQ=255)                                                                                                                                                                                                               acaGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggaatttttctttgagccaggttaatgtggccgcatttcggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcccacatttcatatttcaacgaaagactagtctatgagcactgataataagcaatcattgcccgcgattaccctcgcggcgattggagttgtct                                         <  1:312934‑M2/250‑207 (MQ=255)                                                                                                                                                                                                                  gCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTCCTCAttt                                     <  2:402742/251‑1 (MQ=255)                                                                                                                                                                                                                    cACTTGATCGGTCAACTGATCCTTAACTGAGCGGCATTAATCTTGGTTCTTGTGTTTGTAACTAACTATCAGCTTCAAAAATATGCTCATTTTGTTACATCAGTTACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACATGTATAAAGGTATACAGAAAAGCAAAGAAATTCTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCGCTCAGTCTTTCCTCATTTGa                                   <  2:445865/251‑1 (MQ=255)                                                                                                                                                                                                                        ggATCGGTCAACTGATCCTTAACTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgtttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtctatgagcactgataataagcaatcattgcccgcgattaccctcgcggcgattggagttgtctacggcgatat                               >  1:108697‑M2/1‑35 (MQ=255)                                                                                                                                                                                                                               tCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTCCTCATTTGACGAAGGGAGtt                        >  1:411740/1‑251 (MQ=255)                                                                                                                                                                                                                                 aaCTGATCCTTAACTGATCGGCATTActcaacgggggggaatttttctttgagccaggttaatgtggccgcctttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtctatgagcactgataataagcaatcattgcccgcgattaccctcgcggcgattggagttgtctacggcgatattggtacc                        <  1:73949‑M2/249‑224 (MQ=255)                                                                                                                                                                                                                                    tGATCCTTAACTGATCGGCATTAatcaaagggggggtatttttctttgagccaggttaatgtggccgaatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtctatgagccctgctaataagcaatcattgcccgcgattaccctcgcggcgtttggagttgtctacgacgttattggtaccagccc                   <  2:302086‑M2/251‑229 (MQ=255)                                                                                                                                                                                                                                     gaaccTTAACTGAGCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTCCTCATTTGACGAAGGGAGTTTTAt                    <  2:419015/246‑1 (MQ=255)                                                                                                                                                                                                                                         cTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTCCTCATTTGACGAAGGGAGTTTTATTCAAcc              >  1:127837/1‑251 (MQ=255)                                                                                                                                                                                                                                            aaatgatCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtctatgagcactgataataagcaatcattgcccgcgattaccctcgcggcgattggagttgtctacggctatattggtaccagcccgttatat            >  2:23857‑M2/4‑15 (MQ=255)                                                                                                                                                                                                                                              cTGATCGGCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttcggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtctatgagcactgataataagcaatcattgcccgcgattaccctcgcggcgattggagttgtctacggcgatattggtaccagcccgttatatac          <  2:61031‑M2/250‑238 (MQ=255)                                                                                                                                                                                                                                                gATCGGCATTCcgcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatcctgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtctatgagcactgataataagcaatcattgcccgcgattaccctcgcggctattggagttgtctacggcgatattggtaccagcccgttatatacac        >  2:347106‑M2/1‑11 (MQ=255)                                                                                                                                                                                                                                                     gCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtctatgagcactgataataagcaatcattgcccgcgattaccctcgcggcgattggagttgtctacggcgatattggtaccagcccgttatatacacttcgtg  >  1:478888‑M2/1‑6 (MQ=255)                                                                                                                                                                                                                                                     gCATTActcaaagggggggtatttttctttgagccaggttaatgtggccgcatttaggagtacgattttgccgttaatcgtgcatactgtgcgcttttttgtgggccaagggactaagcacacatttcatatttcaacgaaagactagtctatgagcactgataataagcaatcattgcccgcgattaccctcgcggcgattggagttgtctacggcgatattggtaccagcccgttatatacacttcgtg  >  1:75963‑M2/1‑6 (MQ=255)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                      AGACCATCATTTCGAGGGGAAGACGGCGCTTGCGTAGCGTTACAGTACCTGATTCGGCAAGGCAACGAGAGATGAGTTCGGGGTCGAGGTAATCCCCCAGAGAAGTCAGTGGGTTACGCAGAGAATCGTAACGGGATACCAGATCAAGAGCCTGTCCAATGTGCATAAAAAAATCCGGAAACAAGTGAGCGTTTCCGGATTCTTACACAGCCACTGGATCGGTCAACTGATCCTTAACTGATCGGCATTAATCTTGGTTCTGGTGTTTGTAACAAACTATCAGCTACAAAAATATGCTCAATTTGTGACATCAGTAACAAAACGCGTTTTGTTATGTGGATTGCTTGTTTTTTGATCTGGTATAACAGGTATAAAGGTATACAGAAAAGCAAAGAAATACTGCAAAGGAAAACAGCTATAACGTAAGCTAAAGTAATAACCTCTCAGTCTTTCCTCATTTGACGAAGGGAGTTTTATTCAACCTGAACGGACTAC  >  NC_000913/4503266‑4503760

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.