Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 607,765 IS150 (+) +3 bp noncoding (26‑28/60 nt) sokE ← small RNA SokE

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 607765 =0 (0.000)36 (0.710) 33/480 0.5 100% noncoding (28/60 nt) sokE small RNA SokE
?NC_000913 = 3722075 NA (NA)noncoding (1443/1443 nt) IS150 repeat region
* ? NC_000913 = 6077670 (0.000)18 (0.360) 18/478 1.1 100% noncoding (26/60 nt) sokE small RNA SokE
?NC_000913 3720633 = NA (NA)noncoding (1/1443 nt) IS150 repeat region

AGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTCAGCAGAAGATTATTAAAGGTTGCTGTATTATTTAGCGATAAAAAAAGCCTGCCAGATGGCAGGCTATTTAATAACG  >  NC_000913/3721825‑3722321
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                      
aGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACa                                                                                                                                                                                                                                                        <  1:339975/251‑1 (MQ=255)
 gCATGTCCAGAAAAGGCAATTGTCTTGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGTTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGTGTCAGTACaa                                                                                                                                                                                                                                                       <  2:327731/251‑1 (MQ=255)
       ccAGAAAAGGCAATTGTCTGGATAATGCTGTGATGGAGTGTTTCTTTGGAAACTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTg                                                                                                                                                                                                                                                 >  2:323558/1‑251 (MQ=255)
             aaGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGAGCTATATGCATCTTGGTTAACTGTCCAACTTTGTGGTTTCAGTACAAACTTTGATTtat                                                                                                                                                                                                                                           <  2:229881/251‑1 (MQ=255)
               ggCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAg                                                                                                                                                                                                                                         <  1:329818/251‑1 (MQ=255)
                     tGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACATTCTAGAAGGAGTGTTTTTATCTTGAAGAGTTCAGTAATATAAGCGAACTGCAGGATGCTGTTACGGAATATATTGAATACTACAACCGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGCATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTCCAAACTTTGATTTATAGTCAGGt                                                                                                                                                                                                                                   >  1:495463/1‑251 (MQ=255)
                      gTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaac                                                                                                                                                                                                                                  <  1:384476‑M2/251‑23 (MQ=255)
                          ggATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccg                                                                                                                                                                                                                               <  2:370908‑M2/250‑26 (MQ=255)
                          ggATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATGAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccga                                                                                                                                                                                                                              >  1:59565‑M2/1‑225 (MQ=255)
                             tAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaac                                                                                                                                                                                                                            <  2:393064‑M2/250‑29 (MQ=255)
                              aaTGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCtttt                                                                                                                                                                                                                          >  2:186534/1‑251 (MQ=255)
                                        tggAGTCATTCTTTGGAACCTTCACGTCGGGGCGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAAATGAAGGATGCTGTTACGGAATATATTGCATACTACAACAGCAGAAGAATTAGCATGAAATTAACAGGACTGACTCCAATTAAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgacactccaaacccgaccactttggatggt                                                                                                                                                                                                                <  2:315692‑M2/251‑41 (MQ=255)
                                         ggAGAGTTTCTTTGGAACATTAAAGTCGGAGTGTTTTGATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATAAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGcc                                                                                                                                                                                                               >  2:335040/1‑251 (MQ=255)
                                                    ttGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGTCTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACGTTTTGGGGTCAGTACAccctggggctgccactccaaacccgagcaatttggatggtagtcccttctt                                                                                                                                                                                                     >  2:25957‑M2/1‑199 (MQ=255)
                                                               aaGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGAGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggc                                                                                                                                                                                          <  2:456172‑M2/250‑63 (MQ=255)
                                                                    ggAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatata                                                                                                                                                                                    >  2:4457‑M2/1‑183 (MQ=255)
                                                                      aGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCGCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACCccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaa                                                                                                                                                                                  >  2:456443‑M2/1‑181 (MQ=255)
                                                                       gtgtTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCGGTCTCCCTTTCGGTGAATACCTGAGACAAACAGtctc                                                                                                                                                                                 <  1:179840/251‑1 (MQ=255)
                                                                           ttttATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAg                                                                                                                                                                              <  1:323558/250‑1 (MQ=255)
                                                                            tttATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatgggagtcccttcttggcatggaggcaatataaacatgc                                                                                                                                                                             >  1:451121‑M2/1‑175 (MQ=255)
                                                                                   tgatgaGTTCAGTAATATAAGCGAACTGAAGGATGCTGATACGGCATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGCATATCGGAATCAGACCTATCTGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAATCAGTCTCAAGCACCCGTgg                                                                                                                                                                     >  1:44901/1‑251 (MQ=255)
                                                                                    gatgaGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGCAATTAAAAGGTCTGACTCCAATTGACTATCGGAATCAGACCTATATGCCTCTTGTTTAACTGTCTAACTTTTTGGGGTCAGTACAccctgcggctgccactccaaacccgaacaatttgtatgttagtccattcttctcatggaggcaatataaacatgctgacgaaat                                                                                                                                                                    <  2:11163‑M2/251‑85 (MQ=255)
                                                                                    gatgaGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGc                                                                                                                                                                    <  1:93950/251‑1 (MQ=255)
                                                                                         gTTCAGCAATATAGGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGCAGAATTAGCCTGAAATTAACAGGTCTGACTCCAATTGAGTATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGTTCAGTACAccctagggctgccactccaaacccgaacaatttggttggtagtcccttcttctcatgacggcaatataaacatgctgacgaaatatgcc                                                                                                                                                               <  2:149474‑M2/251‑90 (MQ=255)
                                                                                          ttCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgccc                                                                                                                                                              <  1:410309‑M2/251‑91 (MQ=255)
                                                                                                         gAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcat                                                                                                                                                 <  1:422729‑M2/249‑104 (MQ=255)
                                                                                                               aaGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCTGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTg                                                                                                                                                                      <  1:354844/222‑1 (MQ=255)
                                                                                                               aaGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTg                                                                                                                                                                      >  2:354844/1‑222 (MQ=255)
                                                                                                                aGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGACTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTttcttt                                                                                                                                        >  2:222965/1‑250 (MQ=255)
                                                                                                                    tGCTGTTACGGAATATATTGCATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCt                                                                                                                                    >  2:475498/1‑251 (MQ=255)
                                                                                                                           aCGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatagtgctgtgtttaacggtgc                                                                                                                             >  1:216826‑M2/1‑128 (MQ=255)
                                                                                                                               aaTATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTACCTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactcaaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcacttgcggcagtcatagtgctgtgtttaacggtgctggg                                                                                                                         <  2:508037‑M2/251‑128 (MQ=255)
                                                                                                                                     ttGAATACTACAACAGCAGAAGAATTAGCCTGCAATTAAACGGTCTGACTCCCATTGAATATCGGAATCAGACCTATATGCCTCGAGTTTACCTGTCCAAATTTTTGGGGTCAGTACAccctggggctgccactccaaacccgcacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatcgtgctgtgtttaacggtgctgggatttac                                                                                                                   <  2:312049‑M2/251‑134 (MQ=255)
                                                                                                                                               caacaGCAGAAGAATTAGCCTGAAATTAAAAGGCATGACTCCAATTGAATCTCGGAATCAGACCTATATCCCTCGTGTTTCACTTTCCAACTTTTTAGGGTCAGTACAAACTTTGATTTATAGTCAGGTGCTGCTTTTCTCTGTCTGCCTTTCGGTGCATACCTGAGACAAACAGTCTCAAGCACCCGAGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTAATa                                                                                                          >  1:521088/1‑250 (MQ=255)
                                                                                                                                                     cagAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatagtgctgtgtttaacggtgctgggatttacgcttctggtcggagac                                                                                                   <  1:315267‑M2/251‑150 (MQ=255)
                                                                                                                                                        aagaaTTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAatat                                                                                                >  1:41510/1‑251 (MQ=255)
                                                                                                                                                              tAGCCTGAAATTAAAAGGTCTGACTCCAGTTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGCGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATg                                                                                             >  1:286194/1‑248 (MQ=255)
                                                                                                                                                                          aaaaGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatagtgctgtgtttaacggtgctgggatttgcgcttctggtcggagactcgctgtgtgagtttacggtg                                                                              >  2:205260‑M2/1‑81 (MQ=255)
                                                                                                                                                                          aaaaGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTc                                                                              <  1:12086/251‑1 (MQ=255)
                                                                                                                                                                           aaaGGTCTGACTCCAATTGAATTTTGGAAGCAGATCTATATGCCTCGTGTTTAACTGTTCCACTTTTTGGTGTCATTACAATCTTTGATTTATAGTCAGGTGGGGCCTTTCTCTGTCGGCCTTTCGGTGAATTCCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTCAATAAGTTTGTTTCTTCTCCTTGATATAATTCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTca                                                                             <  2:378653/251‑1 (MQ=255)
                                                                                                                                                                                   gACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatagtgctgtgtttaacggtgctgggatttacgcttctggtcggagactcgctgtgtgagtttacggtgaaggaac                                                                       >  1:334490‑M2/1‑72 (MQ=255)
                                                                                                                                                                                       ccAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatagtgctgtgtttaacggtgctgggatttacgcttctggtcggagactcgctgtgtgagtttacggtgaaggatcgtaata                                                                 >  2:533770‑M2/1‑68 (MQ=255)
                                                                                                                                                                                       ccAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatagtgctgtgtttaacggtgctgggatttacgcttctggtcggagactcgctgtgtgagtttacggtgaaggaa                                                                        <  2:143707‑M2/244‑177 (MQ=255)
                                                                                                                                                                                       ccAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatagtgctgtgtttaacggtgctgggatttacgcttctggtcggagactcgctgtgtgagtttacggtaaaggaa                                                                        >  1:143707‑M2/1‑68 (MQ=255)
                                                                                                                                                                                         aaTTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATcc                                                                                                                         >  1:110179/1‑193 (MQ=255)
                                                                                                                                                                                         aaTTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATcc                                                                                                                         <  2:110179/193‑1 (MQ=255)
                                                                                                                                                                                            tGAATACCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTCCAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatagtgctgtgtttaacggtgctgggatttacgcttctggtcggagactcgctgtgtgagtttacggtgaaggaacttaatatgga                                                             >  2:457643‑M2/1‑63 (MQ=255)
                                                                                                                                                                                             gAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatagtgctgtgtttaacggtgctgggatttacgcttctggtcggagactcgctgtgtgagtttacggtgaaggaacgtaatattgagt                                                           <  1:207425‑M2/251‑190 (MQ=255)
                                                                                                                                                                                             gAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTCAGCAGAAGATTATTAAAg                                                            <  1:186534/250‑1 (MQ=255)
                                                                                                                                                                                                      aaTCAGACCTATATGCCTCGTGTTTAACTGTCCATCTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatagtgctgtgtttaacagtgctgggatttacgcttctggtcggagactcgctgtgtgagtttacggtgaaggaacgtaatattgagtttaaggctg                                                  >  2:448732‑M2/1‑53 (MQ=255)
                                                                                                                                                                                                         cAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatagtgctgtgtttaacggtgctgggatttacgcttctggtcggagactcgctgtgtgagtttacggtgaaggaacgtaatattgagtttaaggctgttc                                               >  2:207425‑M2/1‑50 (MQ=255)
                                                                                                                                                                                                         cAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatagtgctgtgtttaacggtgctgggatttacgcttctggtcggagactcgctgtgtgagtttacggtgaaggaacgtaatattgagtttaaggctgttc                                               >  1:393064‑M2/1‑50 (MQ=255)
                                                                                                                                                                                                          aGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatagtgctgtgtttaac                                                                                                                                  >  1:447281‑M2/1‑49 (MQ=255)
                                                                                                                                                                                                          aGACCTATATGCCTCGTGTTTAAATGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatagtgctgtgtttaac                                                                                                                                  <  2:447281‑M2/167‑119 (MQ=255)
                                                                                                                                                                                                                         gtgtTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACACGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTCAGCAGAAGATTATTAACGGTTGCTGTATTATTTAGCATTaaaaaa                                 >  2:400785/1‑249 (MQ=255)
                                                                                                                                                                                                                         gtgtTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATGTATAGTCAGGTGGGGCTTGTCTCTGTCTTCCTTTCGGTGAATACCTGAGACAAACAGACTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTGTTTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATCTATATATGAGATAATCTTGATTCAGCAGAAGATTATTAAAGGTTGCTGTATTATTTAGCGATAAAATAAg                               <  1:274199/251‑1 (MQ=255)
                                                                                                                                                                                                                           gtTTAACTGTCCAACTTTTTGGGGTCAGTACAccatggggctgccactccaaacacgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatagtgctgtgtttaacggtgctgggatttacgcttctggtcggagactcgctgtgtgagtttacggtgaaggaacgtaatattgagtttaaggctgttctcgcttacgaaccga                                <  1:467284‑M2/248‑217 (MQ=255)
                                                                                                                                                                                                                             ttAACTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatagtgctgtgtttaacggtgctgggatttacgcttctggtcggagactcgctgtgtgagtttacggtgaaggaacgtaatattgagtttaaggctgttctcgcttacgaaccgaagaa                            >  1:370908‑M2/1‑30 (MQ=255)
                                                                                                                                                                                                                               aaCTGTCCAACTTTTTGGGGTCAGTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggcagtcatagtgctgtgtttaacggtgctgggatttacgcttctggtcggagactcgctgtgtgagtttacggtgaaggaacgtaatattgagtttaaggctgttctcgcttacgaaccgaagaagt                          <  1:463418‑M2/250‑223 (MQ=255)
                                                                                                                                                                                                                                   gTCCAACTTTTTGGGGTCAGTACAccctggggctgccactcaaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaatataaacatgctgacgaaatatgcccttgcggaagtcatagtgctgtgtttaacggtgctgggatttacgcttctggtcggagactcgctgtgtgagtttacggtgaaggaacgtaatattgagtttaaggctgttctcgcttacgaaccgaagaagtagccg                     <  1:524705‑M2/251‑228 (MQ=255)
                                                                                                                                                                                                                                           ttttGGGGGTATTACAccctggggctgccactccaaacccgaacaatttggatggtagtcccttcttcgcatggaggcaagataaacattctgacgaaatattccctttcggcagtcatagtgctttgtttaacggtgctgggatttacgcttctggtcggagactcgctgtgtgagtttacggtgaaggaacgtaatattgagtttaaggcttatctcgcttacgaaccgaagaattagccgttgttc               >  2:315267‑M2/1‑16 (MQ=255)
                                                                                                                                                                                                                                                       tACAccctggggctgcaactacaaccccgaacaatttggatggtagtcccttcttcgcgtggaggcaatatacacatgatgacgaaatatgcccttgcggcagtcatagtgctgtgtttaacggtgctgggatttaagcttctggtcggagaatcgctgcgtgagtttacggtgaaggcacgtaatattgagtttaaggctgttctcgcttacgaaccgaagaagtagccgttgttcggggaggaatccc  <  2:42186‑M2/250‑247 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                      
AGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTGAATACCTGAGACAAACAGTCTCAAGCACCCGTGGCTATTCTAGCTTAATAAGTTTGTTTCTTCTCCTTGATATAATCCTAAAAAAATCTCATAAAATTAATATATGAGATAATCTTTATTCAGCAGAAGATTATTAAAGGTTGCTGTATTATTTAGCGATAAAAAAAGCCTGCCAGATGGCAGGCTATTTAATAACG  >  NC_000913/3721825‑3722321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.