Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,655,795 IS2 (–) +5 bp intergenic (‑122/‑9) ynfA ← / → ynfB putative transporter YnfA/DUF1283 domain‑containing protein YnfB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1467910 =NA (NA)26 (0.510) 23/482 0.8 96.2% noncoding (1331/1331 nt) IS2 repeat region
?NC_000913 = 1655799 1 (0.020)intergenic (‑126/‑9) ynfA/ynfB putative transporter YnfA/DUF1283 domain‑containing protein YnfB
* ? NC_000913 = 1469240NA (NA)37 (0.730) 36/478 0.4 100% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 1655795 = 0 (0.000)intergenic (‑122/‑13) ynfA/ynfB putative transporter YnfA/DUF1283 domain‑containing protein YnfB

AGAGAAATAACTGGCTGGCTGCTACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGAACGATCTTCACTATGTTAAGG  >  NC_000913/1469005‑1469483
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                   
agagAAATAACTGGCTGGCTGCTACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAacttac                                                                                                                                                                                                                                      <  1:37322/251‑1 (MQ=34)
      aTAACTGGCTGGCTGCTACACCATGTTGCCGGGCAACGAGGGCGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGGGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGCTATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTCCTTATGc                                                                                                                                                                                                                                >  1:340467/1‑251 (MQ=255)
                       acacCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGaaa                                                                                                                                                                                                                <  1:497009/250‑1 (MQ=255)
                            aTGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCGAAAAACTAGTATTAAGGCGATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTTTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGtt                                                                                                                                                                                                          <  1:358601/251‑1 (MQ=255)
                            aTGTTGCCGGGCAACGAGGGAGAACGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCTCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGTCTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGtt                                                                                                                                                                                                          <  1:254953/251‑1 (MQ=255)
                                        aaCGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACt                                                                                                                                                                                              <  1:30789/251‑1 (MQ=255)
                                           gAGGGAGACCGTCATCACCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCGCCGGCCCTAAGACATCAATCATCTGTTCTCCAAGGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGt                                                                                                                                                                                           <  1:232298/251‑1 (MQ=255)
                                                            ccGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAAc                                                                                                                                                                          <  1:350163/251‑1 (MQ=255)
                                                                           gctgAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTTTAGATTCAATTGGTCAACGCAACAGTTAtgt                                                                                                                                                             <  1:313551/249‑1 (MQ=255)
                                                                                                             ccGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGAc                                                                                                                         <  1:263466/251‑1 (MQ=255)
                                                                                                             ccGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTGGCGGAGTTTTTTTGAGTGAGAc                                                                                                                         <  1:154846/251‑1 (MQ=255)
                                                                                                                                          caatcaTCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACGTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACGTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCctct                                                                                            <  2:71000/251‑1 (MQ=255)
                                                                                                                                                        ccAATGTCTAGTCTAAAAAGTAGTATTAAGACGATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGACAGTCTAAAACCAAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACGTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGTAAAAAGCCTCTGTTTTTGAACTa                                                                                <  2:102816/249‑1 (MQ=25)
                                                                                                                                                        ccAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTa                                                                                <  2:397163/249‑1 (MQ=255)
                                                                                                                                                                  gTCTAAAAACTCGAATTAAGACTATCACTTATTTAAGTGATATTGGTTGACTGGAGATTAAGGAGGCCAGACTAAACCCCAGAACTTACTTATGCTGAATCCGGTGCGAAAATTGATAATAAAGGTACTTGTAGATTCAATTGGTAACCGCAACAGATATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTATGATTTTGAACTATGGAAGAACgg                                                                     >  2:334888/1‑250 (MQ=25)
                                                                                                                                                                  gTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGa                                                                    <  1:221314/251‑1 (MQ=255)
                                                                                                                                                                              gtagtAAGACTATCACTTATTTAAGTGATATTTGTTGTCTGGAGATTCAGGGGGTCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTTTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGGTGCGGAGGTTGTTTTAATTTGACGTACATTTACAGCAGATGAAAAGGCCGCTGAACGTGAACTATGGAAACACGTAACAAGCTTCAGt                                                        <  2:502732/247‑1 (MQ=25)
                                                                                                                                                                                       cTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCg                                               >  1:366002/1‑251 (MQ=255)
                                                                                                                                                                                                aTTTAAGGGATATTAGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGAGAAAATTGATAATAAAGGAACTTGTAGATTCAATTGGTCAACGCAAAAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTAAACTATGGAAGAAAGGAACAGGCTTAAGAGAAATAGCGAATATCCTg                                      >  2:393398/1‑251 (MQ=21)
                                                                                                                                                                                                   tAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTggg                                    <  1:516089/250‑1 (MQ=255)
                                                                                                                                                                                                        gATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCaa                               >  1:228529/1‑250 (MQ=255)
                                                                                                                                                                                                            ttGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAAccc                          >  1:125356/1‑251 (MQ=255)
                                                                                                                                                                                                                       gagaTTAAGGAGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAAATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGACTGAGCCGAACATTTACAGCAGAGGAAACAGCCTATGTTTTTGCACTATGAACGACCGGAACAGGCTTCAGTGAAATAGCGAATTTCCTGTGTTCCAACCCCGTAACGCTCtt               >  2:421934/1‑251 (MQ=18)
                                                                                                                                                                                                                                    ccAGTCTAAACCCCAGAACTTCCTTATGCTGATTCCGGAGCGAAACTTGTTAATAAAGGTACTTGTCGATTCACTTGGTCACCGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGCCGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAACCCCGGAACGATCTTCACTATGTTAAgg  >  2:498361/1‑251 (MQ=17)
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                   
AGAGAAATAACTGGCTGGCTGCTACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGAACGATCTTCACTATGTTAAGG  >  NC_000913/1469005‑1469483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.