| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,474,425 | T→G | K43T (AAA→ACA) | rpsL ← | 30S ribosomal subunit protein S12 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,474,425 | 0 | T | G | 98.4% | 229.8 / ‑2.4 | 61 | K43T (AAA→ACA) | rpsL | 30S ribosomal subunit protein S12 |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base G (28/32); minor base C (0/1); total (28/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.17e-01 | |||||||||||
TAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGG‑ACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACG > NC_000913/3474179‑3474668 | tAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGTAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAg < 1:177185/250‑1 (MQ=255) aGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGgtag < 1:213046/251‑1 (MQ=255) cGCTTCACTCCATACTTGGAACGAGCCTGCTGACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACCCCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGtata < 1:265415/251‑1 (MQ=255) cACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCCGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATacac > 2:234070/1‑251 (MQ=255) tGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACTTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGAAGGAGTGGTAGTATATACACGAGTACATAc < 1:99421/250‑1 (MQ=255) tGGAACGAGCCTGCATACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGAGTGGTAACGAACACACGGGAGGTATTTAACACGACCGCCACG‑ATCCTGGATTCCTGTGTGCTCCTGCAGGTTGTGAACTTCACCACCGA‑TGTAGGCAGTCACTTCGAAACCGCTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACg > 1:67900/1‑251 (MQ=255) ggaccgggCCTGCTTGCGGTCTTTAACGCCGGAGATGTCAAGCGACCCGCGTACGGTGTGTGAACAAACACCCGGGAGGTCTTTAACTCTCCCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGc < 2:232373/244‑1 (MQ=255) gAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGGGGTAGTATATACACGAGTACATACGCCACGt > 2:322363/1‑251 (MQ=255) tGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCCTTAACACGACCGCCACGGATC‑AGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTg > 1:291136/1‑251 (MQ=255) gctgaCGGTATTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACAAACCCCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGGTCGGTTTTGTAGGAGTGGTAGTAGATACACGATTACATACGCCACGttttt < 2:250645/245‑1 (MQ=255) cTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCg > 2:387093/1‑251 (MQ=255) tactgTCTTTAACGCCGGAGCAGTCAACCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCgg < 2:75118/246‑1 (MQ=255) gggcTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCAt < 1:354030/248‑1 (MQ=255) gTCTTTAACGCCGGAGCAGTCAAGCGCCCCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATg < 1:181975/251‑1 (MQ=255) gTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATg < 1:341783/251‑1 (MQ=255) cGCCGGAGCAGTCAAGCGCACCCCGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAgc > 1:317300/1‑251 (MQ=255) ccGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAgcgc > 2:90841/1‑251 (MQ=255) gccgTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGCTCTTTCACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTAGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTAGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCatgc > 1:25184/4‑247 (MQ=255) cAGTCAAGCGCACCACGTACGGTGTGGTAACGAACCCCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGTAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCAc < 2:41674/251‑1 (MQ=255) acGTACGGTGTGGTAAGGAACGCCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCaa < 2:317300/251‑1 (MQ=255) gTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGC‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGCGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACt > 2:113693/1‑251 (MQ=255) gTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACt > 1:28447/1‑251 (MQ=255) ggTGTGGTAACGAACACCCGGGCGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGc > 2:166547/1‑251 (MQ=255) ggTGTGGGAACGAACCCCCGGGAGGTCTTTAACCCGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGc < 2:111050/251‑1 (MQ=255) cGAACACCCGGGAGGTCTTTCACCCGACCGCCTCGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAACCCGTTAGTCAGACGAGCACGGCATACGTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACCCGAGTACATACGCCACGTTTTTGCGGGCATGCTGCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCCCGTgg < 1:48598/251‑1 (MQ=255) ccGGGAGGTCTTAAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGt < 2:102571/251‑1 (MQ=255) gtgagttCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTGCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTAc < 2:1348/245‑1 (MQ=255) gTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGCGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCt > 1:376910/1‑251 (MQ=255) ttAACCCGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTg < 1:29932/248‑1 (MQ=255) cacGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCACGATGCGACCATCACCACCGC‑TGTAGGAAGTCACTTCGAAACCGATAGTCAGACGAACCCGGCATACTTTACGCAGCGCGGAGTTCGGCTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGATTGCGTACCAGCTGGTTAACt > 1:25118/1‑251 (MQ=255) cggcctgcaaggagc‑aggatcaGGGAGTGCTCCTGCAGGTTGGGACCTTCACCACCGA‑TGTAGGAAGGCACTTCGAAACCTTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGGAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTGGCTTGTCGCAGCTGTGCGAGCACGTGGGTTGCGTAGCAGGTGGTTAACTGt < 2:414686/237‑1 (MQ=255) ccGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTa < 2:376910/250‑1 (MQ=255) atcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCt > 2:191220/1‑251 (MQ=255) caCGGAGTGCTCCTGCAGGTTGGGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCCTCCAGCGCAGGCACGTTGCTTTGCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAAGAGCTCCTgg < 2:415090/251‑1 (MQ=255) aCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGt > 1:157456/1‑223 (MQ=255) aCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGt < 2:157456/223‑1 (MQ=255) ggAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTGTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGttt < 1:387093/251‑1 (MQ=255) ccTGCATGTTGTGACCTTCACCACCGAATG‑AGGAAGGCACTTCGAAACCGGTAGGAAGACGAACACGGCATACTTTACGCCTCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACTCCACGTTTTTGCGGGCATGCGTCCAGCGCAGGCACGGTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGATTAACGGTTTCCATTAAATAGCTCCTGGTTGTAGCtttt < 2:202239/251‑1 (MQ=255) ccTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCtt < 2:11780/249‑1 (MQ=255) ccTGCAGGTTGGGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGGTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTGTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCttt < 2:64162/250‑1 (MQ=255) catGCAGGTTGTGACCTTCACAACCGA‑GGTAGGAAGTCCCTGCGAAACCGTTAGTAAGACGAACACGGCATACTTTCCGCAGCTCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACGTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCtttt < 2:220254/249‑1 (MQ=255) gACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCGTTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAac > 2:68085/1‑250 (MQ=255) ccTTCACCACCGA‑TGTAGGAAGTCACGTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACg < 2:371104/251‑1 (MQ=255) accaccGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGtaata < 1:166547/251‑1 (MQ=255) ccGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAAc < 2:291136/251‑1 (MQ=255) gA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGt > 1:431362/1‑251 (MQ=255) gTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCt > 1:42358/1‑251 (MQ=255) gAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTcac > 2:148282/1‑250 (MQ=255) gAAGTCACTTCGAAACCGTTAGTCAGACGAACAAGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGATCCAGGTTTTAGCTTTTGCTTCGTACACACGTAATAAAACGTCCTcac > 1:168159/1‑250 (MQ=255) gcACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTGCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTGTCGCAACTTTGCGAGCACGTTGGTTGCGTACCAGCTGGTTAACTGTTGACATAAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACTCGTAATAAACCTTCCTCACACAat < 2:185472/250‑1 (MQ=255) cACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAat < 2:42358/250‑1 (MQ=255) cGAACACGGCATACTTTACGCAGAGCGGAGATCGGCTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGAAACTTTGCGAGCACGTGGTTTGAGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTACTCACACAATCTGAGG‑ACGCCGCATTTTAGGGc > 2:379801/1‑251 (MQ=255) cacGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGACACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGG‑ACGCCGAATTTTAGGGCGATg > 1:236395/1‑251 (MQ=255) cggcaatcTTTACGCAGCGCGGAGTTCGGTTTTGTAGGTGTGGTATTATATACTCGATGACATACGCCGCGTTTTTGCGGGCATGCTTTCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCTTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTGTAGCTTTTGCTACGTAAACACGTAATAAAACGTCCTCACACAATATGAGG‑GCGCCGAATGTTATGGTGATGcc < 2:341889/244‑1 (MQ=255) ggCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCACCTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGG‑ACGCCGAATTTTAGGGCGATGCCg > 2:199386/1‑251 (MQ=255) ggCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGG‑ACGCCGAATTTTAGGGCGATGCCg > 2:291034/1‑251 (MQ=255) aTACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGAGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTACATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGG‑ACGCCGAATTTTAGGGCGATGCCGaa > 2:309895/1‑250 (MQ=255) gCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGG‑ACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCaa < 1:136085/251‑1 (MQ=255) cgGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGG‑ACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAat > 2:29380/1‑250 (MQ=255) gAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGTGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCCCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTCAACCCGTAATAAAACGGCCTCACACAATATGAGGCAC‑CCGAATTTTAGGGCGATGCCGAAAAGGGGTAAAGAAatat > 2:309417/1‑250 (MQ=255) ggTTTTGTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGG‑ACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACg > 1:327557/1‑250 (MQ=255) | TAAGCCTTAGGACGCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATC‑AGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGA‑TGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGG‑ACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACG > NC_000913/3474179‑3474668 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |