| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,595,044 | 0 | T | A | 22.2% | 99.8 / 10.6 | 55 | Y146F (TAC→TTC) | livM | branched chain amino acid/phenylalanine ABC transporter membrane subunit LivM |
| Reads supporting (aligned to +/- strand): ref base T (36/6); new base A (0/12); total (37/18) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.41e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TGTCGGTTTCGGGATCTGACTGATTCCGTTCGGGCCGCCGGTAATTTCGGTGTTATTGAGCAGCAATATGCGCACAATTTCGCCGAAACCGAGGGTAAC‑GATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGCTTTTCAACCCTTTCTGGAAAGCCG > NC_000913/3594794‑3595293 | ggtgggttgggggATCTGACTGAGTCCGTTCGGGCCGCCGGTAATTGCGGGGTTATTGAGCAGCAATATGCGCAAAATTTCGCCGAAACCGGGGGTAAC‑GATCGCCAGATAGTCACCGCGCAACCGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGt < 2:94821/241‑1 (MQ=255) cGGGATCTGCCTGATTCCGTCCGGGCCGCCGGTAATTTCGGTGTTATTGAGCAGCAATATGCGCACAATTTCGCCGAAACCGAGGGTAAC‑GATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTTAGCGCCGATGGCGTAGAAAccg < 1:114448/250‑1 (MQ=255) gATCTGACTGATTCCGTTCGGGCCGCCGGTAATTTCGGTGTTATTGAGCAGCAATATGCGCACCCTTTCGCCGAAACCGAGGGTAAC‑GATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑GAG‑CCGGAAGACC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCACGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAACGAGTAAGCGCCGATGGCGTAAAAACCGCCGt > 2:208561/1‑251 (MQ=255) ctgactgaTTCCGTTCGGGCCGCCGGTAATTTCGGTGTTATTGAGCAGCAATATGCGCACAATTTCGCCGAAACCGAGGGTAAC‑GATCGCCCGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCAGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGAGATTGAGCAGCGCAAAAGAGTAAGCGCCGATGGCGTAACAAcccacgcacc > 2:183080/1‑243 (MQ=255) gTAATTTCGGTGTTATTGAGCAGCAATATGCGCACAATTTCGCCGAAACCGAGGGTAAC‑GATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCACAAGAGCAAGCGCCGATGGCGTAAAAACCGCCGCACCCCACCACCCGCAGACCAGAAAgccc > 2:366781/1‑248 (MQ=255) tgtTATTGAGCAGCAATATGCGCACAATTTCGCCGAAACCGAGGGTAAC‑GATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGGGATTGAGCAGCGCAAAAGTGTAAGCGCCGCTGGCGTAAAAACCGCCGTACCCCCGCACCAGCAGACCAGAAAGACCAACAACCACg > 2:101251/1‑251 (MQ=255) tATTGAGCAGCAATATGCGCACAATTTCGCCGAAACCGAGGCTAAC‑GATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑CCCGCCGCTGCCA‑TTAATCCAGCACTCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGCAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCCGAACGACCAACAACCACGTTc > 1:272456/1‑251 (MQ=255) aTTGAGCAGCAATATGCGCACAATTTCGCCGAAACCGAGGGTAAC‑GATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTc > 1:15322/1‑250 (MQ=255) gAGCAGCAATATGCGCACAATTTCGCCGAAACCGAGGGTAAC‑GATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGcc > 1:401673/1‑251 (MQ=255) gcaATATGCGCACAATTTCGCCGAAACCGAGGGTAAC‑GATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGACGCTGCCA‑TTAATCCAGCACTCGGCAGGCAGGACCAGGA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGGACCCCAGCACCAGCAGACCAGAAAGACCAACAAGCACGTTCAGCCCg > 1:184405/1‑248 (MQ=255) atGCGCACAATTTCGCCGAAACCGAGGGTAAC‑GATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCg > 1:9593/1‑249 (MQ=255) tttCGCCGAAACCGAGGGTAAC‑GATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGt > 1:342843/1‑249 (MQ=255) ttCGCCGAAACCGAGGGTAAC‑GATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTCAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGCGACCGAGGATAATGt > 1:354141/1‑248 (MQ=255) ccaaaccaggggTAACCGATCGCAAGAGAGTCCCCGCCCAACCGCAGC‑CCCGAAAACC‑GGGGCGGGAACCCC‑CCCGCCGCTCCCA‑TTAACCCAGCAACCGGCGGGCAGGTCAAGAA‑GCCAAA‑G‑CGGTAATAGTGATTGAGCAGCGAAAAAGTGAAAGCGCCGATGGCGAAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCAt < 1:83517/242‑1 (MQ=255) aacccGAGGGTAAC‑GACCGCCAGTTAGCCCCCGCGAAACCGCA‑CCCCGAAAAACCCGGG‑CAGGACGCCC‑CCCGCCGCTCCCA‑TTAATCCAGCAATCGGCGGGCGGGTCCAGAA‑CCCCAA‑G‑CCGTAATAGTGTTTGAGCAGCGAAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGt < 1:314535/248‑1 (MQ=255) aaaCCGAGGGTAAC‑GATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGt > 1:412598/1‑251 (MQ=255) aCCGAGGGTAAC‑GATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACACCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTc > 1:253802/1‑250 (MQ=255) aGGGTAAC‑GATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGAACGAGGATAATGGAGATCATGGTCAgggg > 2:73512/1‑250 (MQ=255) aTCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑CAC‑CCGCAAGCCC‑CCCGCAGCTGCCA‑TTAATCCAGCAATCGGCAACCACGCCCAGAC‑GCCCAC‑G‑CCGTCATAGTGATTGAGCAGCGCAAACGCGTAAGCGCCGATGGCGTAAACACCGCCGTACCCCACCACCACCCGACCAGAAACACCAACAACCACGTCCAGCCCGAGACCGAGGATAATGCAGATCATCGTCAGCGTGGCAATATc > 1:61230/1‑251 (MQ=255) gtcccccccgcaccctcaaagccgAAAACCCGAC‑CAGAAAGCCC‑GCCGCCGGTACCA‑TAAACCCAGAAATCCGCAGGTAGGACGAAAA‑GCCTAA‑G‑CCGAAATAGTGTTTGCGCAGCGCAAAAGTGAAAGCTCGTAGGGCGAAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGAGCATGGTCAGGGTGGCAATATCCACCGTCCcg < 1:203632/228‑1 (MQ=255) cccccgccaaaccgcccaCCGGAAAACC‑CGG‑GAGGAACCCCCGCCCCCGCTCCCA‑TTAACCCAACAGGGGGCGGGCGGGTCCAGAA‑‑CCCAA‑GGCCGAAATAGTGTTGGAGCCGCGCAAAAGTGTAAGCGCCGAGGGCGAAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCcgcg < 2:419725/235‑1 (MQ=255) cgcgCAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAAACGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGa > 1:11719/1‑250 (MQ=255) gcAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATa > 2:362638/1‑203 (MQ=255) gcaCCGGAAAACC‑GAG‑CAGAAAGCCC‑GCAGCCGCTGCCA‑TTAATCCAGCAATCGCCAGGCAGGGCCAGAA‑GCCCCC‑G‑CCGTAACAGTGATTGAGCAGCGCAAACGTGTAAGCGCCGATGGCGTAAAAAACGCCGGACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGCGAAACCATacagggg > 2:250918/1‑245 (MQ=255) aaaCC‑GAG‑CAGGAAGCCC‑GCCGACGCTGCCA‑TTAATCCAGCAATCCGCAGGCAGGTCCAGAA‑GCCAAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCAGATGGCGTAAACACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAACCCGAGACCGAGGATAATGTAGATCATGGGAAGGGTGGCAATATACACCGTCCCGCTTGAAACCATAAACGgccacgccac > 1:72813/1‑251 (MQ=255) cgccc‑gcccCCGC‑GCCAATTAACCCAGCAAGCGGCAGG‑AGGGCCAAGA‑GCCCAAAG‑CCGTAATAGTGATTGAGCAGCGAAAAAGTGAAGGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAAc < 1:157937/250‑1 (MQ=255) cc‑gccgccgCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAgc > 2:403049/1‑251 (MQ=255) gccgcTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCAc > 1:370438/1‑251 (MQ=255) ccgcTGCCA‑TTAATCCAGCACTCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCCAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGCCCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCCCGCCACCGCAAGCACCCACCGCGCCACg > 2:342704/1‑251 (MQ=255) accaagaaaTCGGAAGGCAG‑TCCAAAAAGCCAAA‑G‑CCGTAATAGTGATTGAGCAGCAAAAAAGTGAAAGCGCAGATGGAGAAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTc < 1:135453/244‑1 (MQ=255) ccAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTg > 1:54216/1‑251 (MQ=255) agaaaacggcggccgggTCAAGAA‑GCCAAA‑G‑CCGTAAAAGTGATGGAGAAGCGAAAAAGTGTAAGCGCCGAGGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCt < 1:286171/236‑1 (MQ=255) ggggagggagggccaagaacccaaa‑G‑CCGTAATAGTGATTGAGCAGCGAAAAAGTGAAAGCGCCGAGGGCGAAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTTAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCAcc < 1:101471/228‑1 (MQ=255) ggcaggcaGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGAGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCACGCACCAACAGCGCCACGAGGAAAAGTTTCTGCTTCACCGt > 2:354720/1‑251 (MQ=255) gcgggctctccaagaacccaaa‑G‑CCGTAATAGTGTTGGAGAAGCGCAAAAGTGAAAGCGCTGTGGGCTTAAACACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTg < 2:354141/231‑1 (MQ=255) ggcaggTCAAGAA‑GCCCAA‑G‑CCTAAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAg < 1:71158/251‑1 (MQ=255) ggagggccaagaagccaagacagTAATAGGGATGGAGCAGCGAAAAAGTGAAACCGCCGAGGGCGAAAAACCCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAg < 2:101203/229‑1 (MQ=255) gTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGATTCTGCTTCACCGTGGAGCCATc > 1:307975/1‑251 (MQ=255) gacaagaaaccaga‑G‑CCATAAAAGTGAGTGAGCAGAGCAAAAGTGTAAGCGACGATGGAAAAAAACCCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCGCCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTTGGGCCATc < 2:253287/238‑1 (MQ=255) ccAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCa > 1:150062/1‑250 (MQ=255) cAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAAt > 1:262245/1‑251 (MQ=255) cAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTCTCAGCGACGATGGCGCAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCCGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGCGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACACCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGCGGAGCCATCa > 1:24442/1‑249 (MQ=255) gCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCCCCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCgg > 2:344872/1‑251 (MQ=255) cAA‑G‑CCGTCATAGTGATTGAGCAGCGCAAAAGTGTACGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACa > 2:263500/1‑215 (MQ=255) cAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCAAGCGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGcc > 2:155456/1‑250 (MQ=255) aa‑G‑CCGTAATAGTGATGGACCAGCGCAAAAGTGTAAGCGCCGATGGCGAAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAg < 1:68923/251‑1 (MQ=255) tAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATaa > 2:119978/1‑250 (MQ=255) aaTAGTGATTGAGCAGCGAAAAAGTGTAAGCGCCGATGGCGAAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAAc < 1:421685/251‑1 (MQ=255) gTGATTGAGCGGCGAAAAAGTATAAGCCCCGAGGGCAAAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGTCCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGTCAAGATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCg < 1:375128/251‑1 (MQ=255) aTTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATCATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTAGAGCCATCACTGGCGGGCAGAATAAACTTctgac > 2:73498/1‑247 (MQ=255) ttGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGt > 2:115654/1‑125 (MQ=255) ttGAGCAGCGAAAAAGTGTAAGCGCCGATGGCGAAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGACAGGGt < 1:115654/125‑1 (MQ=255) tGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCg > 1:205936/1‑251 (MQ=255) ccGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGAAGCCCTCAATGGCGGGCCAAATAAACTTCAGTCCCGAAACCCATTTCAACCCCTTCtt > 2:95115/1‑250 (MQ=255) ccGAGGGCGAAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGCTTTTCAACCCTTTCTg < 2:9593/251‑1 (MQ=255) gTAAAAAACACCGTACCCCACCACCCGCAGACCAGCACGACCAACAACCACGTTCCACCCGAGACCGAGGATAATGTAGATCATGATCAGGCTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCCCCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAAATTCGGCCCGGAAAAGCTTTTCAACCCTCTCTGTGAAGCCg > 2:421980/1‑251 (MQ=255) | TGTCGGTTTCGGGATCTGACTGATTCCGTTCGGGCCGCCGGTAATTTCGGTGTTATTGAGCAGCAATATGCGCACAATTTCGCCGAAACCGAGGGTAAC‑GATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACC‑GAG‑CAGGAAGCCC‑GCCGCCGCTGCCA‑TTAATCCAGCAATCGGCAGGCAGGTCCAGAA‑GCCCAA‑G‑CCGTAATAGTGATTGAGCAGCGCAAAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGCTTTTCAACCCTTTCTGGAAAGCCG > NC_000913/3594794‑3595293 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |