New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1978503 =	NA (NA)	56 (1.320)	52/492	0.1	100%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	4545799 =	0 (0.000)					coding (704/2637 nt)	fimD	type I fimbriae usher protein

CAGCAGCGACTGAACCTGACGATCCCTCAGGCATTTATGAGTAATCGCGCGCGTGGTTATATTCCTCCTGAGTTATGGGATCCCGGTATTAATGCCGGATTGCTCAATTATAATTTCAGCGGAAATAGTGTACAGAATCGGATTGGGGGTAACAGCCATTATGCATATTTAAACCTACAGAGTGGGTTAAATATTGGTGCGTGGCGTTTACGCGACAATACCACCTGGAGTTATAACAGTAGCGACAGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGAGGATTTGCCCCGGTGATCCACGGTATTGCTCGTGGTACTGCACAGGTCACTATTAAACAAAATG  >  NC_000913/4545552‑4546044                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                       accttttgacgtggtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatattcgcagcgaattgagcggcataacctgaatctgaggcagccccgggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcatgaccGatc                                                                                                                                                                                                                                                     <  2:94916‑M2/4‑1 (MQ=255)        gacgtggtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAtcatca                                                                                                                                                                                                                                                 >  1:182711‑M2/241‑248 (MQ=255)        gacgtggtgagatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcatttccGAtcatca                                                                                                                                                                                                                                                 <  2:182711‑M2/8‑1 (MQ=255)                     ggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAaaataaat                                                                                                                                                                                                                                 <  1:302379‑M2/24‑1 (MQ=255)                     ggaggacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAaaataaat                                                                                                                                                                                                                                 <  2:45654‑M2/24‑1 (MQ=255)                       atgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaagaagttggagtcattaccGATCATCAGGTAGCAAAAATAAATgg                                                                                                                                                                                                                               <  2:19965‑M2/26‑1 (MQ=255)                                        gctgtatgaaacccgcctgaagggaaagctgcacgtaatcagcaagcgagatacgcagcgaagtgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaagcggtggagctgcatgacaaagtcatctggcattatctgaacataaaacacgatcaataagttggagtcattgccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTg                                                                                                                                                                                                              <  2:186574‑M2/43‑1 (MQ=255)                                           gtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaacgtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCt                                                                                                                                                                                                           >  1:405771‑M2/206‑251 (MQ=255)                                            tatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatctacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCtt                                                                                                                                                                                                          >  1:386368‑M2/205‑251 (MQ=255)                                                             gggaaagctgcacgtaatcagcaagcgatatacgcagcgacttgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATAcc                                                                                                                                                                                         >  2:186042‑M2/188‑251 (MQ=255)                                                             gggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATAcc                                                                                                                                                                                         <  2:291671‑M2/64‑1 (MQ=255)                                                              ggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctggggcggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggggtcattaccGATCATCATGTATCAAAAATAAATGGCAGCCTATCAATACCTGGCTTGAGCGAGACATAATACCg                                                                                                                                                                                        >  2:221994‑M2/187‑251 (MQ=255)                                                                     tgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCt                                                                                                                                                                                                               <  2:349968‑M2/42‑1 (MQ=255)                                                                     tgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCt                                                                                                                                                                                                               >  1:349968‑M2/180‑221 (MQ=255)                                                                      gcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGtt                                                                                                                                                                                 <  2:177893‑M2/72‑1 (MQ=255)                                                                      gcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAGCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGGGACATAATACCGTTACGTTc                                                                                                                                                                                <  1:272731‑M2/73‑1 (MQ=255)                                                                          gtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCgg                                                                                                                                                                            <  2:254987‑M2/77‑1 (MQ=255)                                                                          ggaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaagaagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGttccctg                                                                                                                                                                            <  2:326603‑M2/77‑3 (MQ=255)                                                                               cagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGAc                                                                                                                                                                       >  1:89291‑M2/170‑251 (MQ=255)                                                                               cagcaagcgatatacgcagcgaattgagcggcataaccggaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGa                                                                                                                                                                        <  2:71257‑M2/81‑1 (MQ=255)                                                                                       gatatccgcagcgaattgagcggcataacctgagtctgaggaagcacctggcacggctgggacggaagtcgctgtcgttatcaaaatcggtggagctgaatgacaaagtcatcgggcattatctgaacataaaagactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTggg                                                                                                                                                                 >  1:335945‑M2/162‑249 (MQ=255)                                                                                               cagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTtat                                                                                                                                                       <  2:89291‑M2/98‑1 (MQ=255)                                                                                               cagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTtat                                                                                                                                                       >  1:13503‑M2/154‑251 (MQ=255)                                                                                                  cgaattgagcggcataacctgaatctgaggcaacacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgaaaaagtcatcgggcattatctgaacataaaacactatcaatcagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACt                                                                                                                                                    >  1:239555‑M2/151‑251 (MQ=255)                                                                                                                      gaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATgg                                                                                                                                <  2:221630‑M2/121‑1 (MQ=255)                                                                                                                      gaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAGCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGAt                                                                                                                                  <  1:146428‑M2/119‑1 (MQ=255)                                                                                                                       aatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGt                                                                                                                               <  2:25930‑M2/122‑1 (MQ=255)                                                                                                                         cctgaggcagcacctggcacggctgggccggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCGTGAGCGAGACATAATACCGTTACGTTCCCGGCTTACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTAt                                                                                                                             <  2:371736‑M2/124‑1 (MQ=255)                                                                                                                         actgaggcagcaccgggcacggctgggacggaagtcgctggcgttctcaaaatcggtggagctgcatgacaaagtcagcgggcattatctgaacataaaacactatcaagaagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATggttt                                                                                                                             <  2:118858‑M2/124‑3 (MQ=255)                                                                                                                            gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTa                                                                                                                              <  2:410621‑M2/123‑1 (MQ=255)                                                                                                                                  gcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTcg                                                                                                                    >  1:389782‑M2/119‑251 (MQ=255)                                                                                                                                             ggctgggccggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGAAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAt                                                                                                         >  1:83711‑M2/108‑251 (MQ=255)                                                                                                                                              gctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCTTTACGTGCCCGGCTGACGCTGTGTGATGGTTATACTCAGGGCGATATTTGCGATGGTATTAACGTGCGCGGCGCACAAt‑t                                                                                                       <  2:405771‑M2/145‑1 (MQ=255)                                                                                                                                                 gggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCGGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑Tg                                                                                                      <  1:235883‑M2/146‑1 (MQ=255)                                                                                                                                                          gtcgctgtcgttctcaacatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATGTTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATg                                                                                            >  2:208369‑M2/95‑250 (MQ=255)                                                                                                                                                                  cgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGt                                                                                   >  1:81021‑M2/87‑251 (MQ=255)                                                                                                                                                                  cgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGt                                                                                   <  2:91852‑M2/165‑1 (MQ=255)                                                                                                                                                                       tcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTAccc                                                                              >  1:212128‑M2/82‑251 (MQ=255)                                                                                                                                                                            atcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATa                                                                          >  1:315005‑M2/77‑250 (MQ=255)                                                                                                                                                                            atcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATa                                                                          <  2:315005‑M2/174‑1 (MQ=255)                                                                                                                                                                                        gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACCTAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGAGGAtt                                                             >  2:194184‑M2/65‑251 (MQ=255)                                                                                                                                                                                             acaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGAGGATTTGccc                                                        <  1:239084‑M2/192‑1 (MQ=255)                                                                                                                                                                                              caaagtcatcgggcattatctgaacataaaacactaacaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGGTGACGCTGGGGGATGGTGATACTCAGGGCGATATTGTCGATGGTATTAACTTTCGCGGGGCACAATGTGG‑CTCAGATGACAATATGTTACCCGATAGTCGAAGAGGAGTTGcccc                                                       <  2:418935‑M2/193‑1 (MQ=255)                                                                                                                                                                                                aagtcatcgggcattatctgaacataaaacactatcaatacgttggagtcattaccGATCATCAGGTAGCAAAAATAACTGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGACGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGCTGACAATATGTTACCCGATAGTCACAGAGGATTTGCCCCgg                                                     >  2:377622‑M2/57‑251 (MQ=255)                                                                                                                                                                                                 agtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGATGATTTGCCCCGGt                                                    <  2:285016‑M2/196‑1 (MQ=255)                                                                                                                                                                                                       cgggcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGAGGATTTGCCCCGGTGATCCa                                              <  1:8315‑M2/202‑1 (MQ=255)                                                                                                                                                                                                          gcattatctgaacataaaacactatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGAGGATTTGCCCCGGTGATCCACgg                                           <  1:186042‑M2/205‑1 (MQ=255)                                                                                                                                                                                                                     acataaaacactatccataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGAGGATTTGCCCCGGTGATCCACGGTATTGCTCGTg                                >  1:97424‑M2/36‑251 (MQ=255)                                                                                                                                                                                                                              actatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGAGGATTTGCCCCGGTGATCCACGGTATTGCTCGTGGTACTGcac                       <  1:62162‑M2/225‑1 (MQ=255)                                                                                                                                                                                                                              actatcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGAGGATTGGCCCCGGTGATCCACGGTATTGCTCGTGGTACTGcac                       <  1:392632‑M2/225‑1 (MQ=255)                                                                                                                                                                                                                                 atcaataagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATGTTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGAGGATTTGCCCCGGTGATCCACGGTATTGCTCGTGGTACTGCACAg                     <  1:208369‑M2/227‑1 (MQ=255)                                                                                                                                                                                                                                       aagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGAGGATTTGCCCCGGTGATCCACGGTATTGCTCGTGGTACTGCACAGGTCACt               <  2:58629‑M2/233‑1 (MQ=255)                                                                                                                                                                                                                                       aagttggagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGAGGATTTGCCCCGGTGATCCACGGTATTGCTCGTGGTACTGCACAGGTCACTa              <  1:93050‑M2/234‑1 (MQ=255)                                                                                                                                                                                                                                             gagtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGAGGATTTGCCCCGGTGATCCACGGTATTGCTCGTGGTACTGCACAGGTCACTATTAAAc        <  1:247752‑M2/240‑1 (MQ=255)                                                                                                                                                                                                                                               gtcattaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGAGGATTTGCCCCGGTGATCCACGGTATTGCTCGTGGTACTGCACAGGTCACTATTAAACaa      <  1:428738‑M2/242‑1 (MQ=255)                                                                                                                                                                                                                                                   ttaccGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGAGGATTTGCCCCGGTGATCCACGGTATTGCTCGTGGTACTGCACAGGTCACTATTAAACAAAATg  >  2:342799‑M2/6‑251 (MQ=255)                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                       CAGCAGCGACTGAACCTGACGATCCCTCAGGCATTTATGAGTAATCGCGCGCGTGGTTATATTCCTCCTGAGTTATGGGATCCCGGTATTAATGCCGGATTGCTCAATTATAATTTCAGCGGAAATAGTGTACAGAATCGGATTGGGGGTAACAGCCATTATGCATATTTAAACCTACAGAGTGGGTTAAATATTGGTGCGTGGCGTTTACGCGACAATACCACCTGGAGTTATAACAGTAGCGACAGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAAT‑TGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGAGGATTTGCCCCGGTGATCCACGGTATTGCTCGTGGTACTGCACAGGTCACTATTAAACAAAATG  >  NC_000913/4545552‑4546044

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.