Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,302,156	IS1 (+) +8 bp	coding (975‑982/1632 nt)	oppA →	oligopeptide ABC transporter periplasmic binding protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	257908 =	NA (NA)	13 (0.310)	13/492	1.1	100%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	1302156 =	0 (0.000)					coding (975/1632 nt)	oppA	oligopeptide ABC transporter periplasmic binding protein
*	?	NC_000913	= 1302163	0 (0.000)	26 (0.610)	25/492	0.5	100%	coding (982/1632 nt)	oppA	oligopeptide ABC transporter periplasmic binding protein
	?	NC_000913	= 1979270	NA (NA)					noncoding (1/768 nt)	IS1	repeat region

TTAACCAGGTAACCTATTTGCCTATTGCTTCTGAAGTTACCGATGTCAACCGCTACCGTAGTGGTGAAATCGACATGACGAATAACAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGCTGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACACCTCCGATCTGCATAAAAAGCTGGCGATTGCTGCCTCTTCATT  >  NC_000913/1301912‑1302401                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                      ttaACCAGGTAACCTATTTGCCTATTGCTTCTGAAGTTACCGATGTCAACCGCTACCGTAGTGGTGAAATCGACATGACGTATAACAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATc                                                                                                                                                                                                                                                 >  2:154763/1‑251 (MQ=255)   aaCCTGGTAACCTATGTGCATCTGGCTTCTGAAGTTACAGCTGTCACCCGCTACCGTGGTGGTGAAATCGACATGGCTTATATCCGCAAGCCGATCGAATTTTTCCAGATGATGAAAAAAGAGATCCCGATCGAAGTACACGTGGATCAGTCCCTGTGCACTTACTTTTACGAAATTATCAACAAAAAACCGCCATTCAACGATGTGCGTGTGCGTACTGCACTGAAACTAGGTATGGACCGCGATATCag                                                                                                                                                                                                                                               <  2:355139/251‑2 (MQ=255)       cgtggtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataccctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgaacaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGATATCATTGtt                                                                                                                                                                                                                                           >  2:7615‑M2/239‑251 (MQ=255)                 tggatgacggatggctggcagctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaatacgttggagtcattaccCGATATCATTGTTAATAAAGTg                                                                                                                                                                                                                                  >  2:417776‑M2/229‑250 (MQ=255)                              gctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcatttccCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCaa                                                                                                                                                                                                                    <  1:262700‑M2/36‑1 (MQ=255)                               cTGAAGGTACCGATGTCAACCGCTACCGTAGTGGTGAAATCGACATGACGTATAACAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtg                                                                                                                                                                                                                   >  1:113743‑M1/1‑222 (MQ=255)                                 gAAGTTACCGATGTCAACCGCTACCGTAGTGGTGAAATCGACATGACGTATAACAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtt                                                                                                                                                                                                                 >  1:303620‑M1/1‑220 (MQ=255)                                                      tACCGTAGTGGTGAAATCGACATGACGTATAACAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgct                                                                                                                                                                                            >  2:111188‑M1/1‑199 (MQ=255)                                                                gctgaccgtaatcagaaagcgttatgcgcagcgaatggggcggcataacctaaatctgaggcagctccgggcacggctgggccggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaaaaagtgggagtcattcccCGTTATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACt                                                                                                                                                                                  <  2:9197‑M2/70‑1 (MQ=255)                                                                  gAAATCGACAGGACGTATAACAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTCCACGTTGATCCATCCCTGTGCACTTACTATTACGAAATTAACAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttct                                                                                                                                                                                <  2:118593‑M1/251‑65 (MQ=255)                                                                            cagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCaaa                                                                                                                                                                       <  1:81051‑M2/81‑1 (MQ=255)                                                                             gACGTATAACAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca                                                                                                                                                                      <  1:300393‑M1/250‑75 (MQ=255)                                                                                    aaCAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCAGAAACCGCCATTCAACAATGTGCGTGTGCGTAACGCACTGAAACTAGGTATGGACCGCGATATCAggtgaggctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtgtcttctgtttctatcagctgtccc                                                                                                                                                              >  2:304006‑M1/1‑169 (MQ=255)                                                                                               gATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagc                                                                                                                                                   >  1:26174‑M1/1‑158 (MQ=255)                                                                                                   gAATTGTTCCAGAAGATGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACAAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGAATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctact                                                                                                                                               >  1:325911‑M1/1‑154 (MQ=255)                                                                                                    tgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGc                                                                                                                                              >  1:79938‑M2/146‑251 (MQ=255)                                                                                                          gcataacctgaatctgaggcagcacctggcaaggctgggaaggaagtcgctgacgttatcaaaatcggtggagctgcatgacaacgtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTAAACTCCAACGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGc                                                                                                                                        >  1:24968‑M2/140‑251 (MQ=255)                                                                                                            cAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCCCGTTGACCCATTCCTGTGCACTTACTATTACGAAATTAACACCCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtg                                                                                                                                      <  2:91579‑M1/251‑107 (MQ=255)                                                                                                                 gCTGAAAAAAGAGATCCCGGACGAAGTTCCCGTTGATCCATACCTGTGCACTTACTATTACGAAATTAAAAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcg                                                                                                                                 <  2:389834‑M1/251‑112 (MQ=255)                                                                                                                            agaTCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaa                                                                                                                       >  1:40943‑M1/1‑129 (MQ=255)                                                                                                                                             tgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGATATCATTGTTAATAAAGAGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAActgct                                                                                                     >  1:415457‑M2/105‑251 (MQ=255)                                                                                                                                              gggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAActgctg                                                                                                    >  2:296885‑M2/104‑251 (MQ=255)                                                                                                                                                    aTCCATACCTGTGCACTTACTATTACGAAATTACCAACCAGCAACCGCCATTCCACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatc                                                                                              >  1:185755‑M1/1‑105 (MQ=255)                                                                                                                                                     tCCATACCTGTGCACTTACTATTACGAAACTAACAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatct                                                                                             >  1:77467‑M1/1‑104 (MQ=255)                                                                                                                                                           cctgcgccctttctatcacgaaattAACAACCAAAAACCGCCATTCAACGATGTGCGTGTGCGTTCCGCCCTGAAACTAGGTATGGACCGCGATCGCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcaactctccctcctgttcagctactgacggggtggggcgtaacggcaaaagcaccgccggacatcagcgctatctctgctc                                                                                       <  2:96385‑M1/239‑154 (MQ=255)                                                                                                                                                            tgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGCTGAAGCGGGtt                                                                                       >  1:416046‑M2/90‑250 (MQ=255)                                                                                                                                                            cTGTGCACTTACTATTACGAAATTAACAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctct                                                                                      >  1:347343‑M1/1‑97 (MQ=255)                                                                                                                                                                          ttACGAAATTAACAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaac                                                                        >  2:368741‑M1/1‑83 (MQ=255)                                                                                                                                                                          gcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagtgggagtcattcccCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGTAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGCTGAAGCGGGTTATACCGCAGACAAAc                                                                        <  2:144466‑M2/176‑1 (MQ=255)                                                                                                                                                                            aCGAAATAAACAACCATAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttcggtttctatcagctgtcccgcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgtcgggcatcagcgctatctctgctctcactgccgtaaaacat                                                                      <  1:278986‑M1/251‑171 (MQ=255)                                                                                                                                                                              aaaatAAACAACGAGAACCCGCCATGCAACGATGTGGGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtgcagctactgacggggtggtgcgtgacggcaaaagcaccgccggacgtcagcgctagctctgctcacactgccgtaaaacatgg                                                                    <  2:176991‑M1/250‑173 (MQ=255)                                                                                                                                                                                    aacaacCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctccctgccgtaaaacatggcaactg                                                              >  1:291373‑M1/1‑73 (MQ=255)                                                                                                                                                                                             aagtcatcgggcattatctgaacataaaacactatcattaagttggcgtcattaccCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATCCTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGATGGCTGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCtgtt                                                     >  1:382809‑M2/57‑251 (MQ=255)                                                                                                                                                                                                               tgaacataaaacactatcaataagttggagtcattaccCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGCTGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCACCCTGTTGTATAACACCTCCGATCt                                   >  1:260420‑M2/39‑251 (MQ=255)                                                                                                                                                                                                                     gtgcgtACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtac                              <  1:139396‑M1/250‑211 (MQ=255)                                                                                                                                                                                                                         gtACCGCACTGAAACTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcacc                         <  2:26174‑M1/251‑216 (MQ=255)                                                                                                                                                                                                                               cACTGAAACTAGGTATGGACCGAGCTATCAggtgatgctgccaacttcctgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttaagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcacctgcagttcacttacacagcttctcaacccggtacgcaccagaaa                    >  2:368785‑M1/1‑30 (MQ=255)                                                                                                                                                                                                                                    aaaCTAGGTATGGACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcatt              <  1:154763‑M1/251‑227 (MQ=255)                                                                                                                                                                                                                                               ggACCGCGATATCAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggcca    <  1:293309‑M1/250‑237 (MQ=255)                                                                                                                                                                                                                                                 aCCGCGATATCAggtgatgctgccaacttcctgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacacggtacgcaccagaaaatcattgttatggccatg  >  2:244024‑M1/1‑12 (MQ=255)                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                      TTAACCAGGTAACCTATTTGCCTATTGCTTCTGAAGTTACCGATGTCAACCGCTACCGTAGTGGTGAAATCGACATGACGAATAACAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGCTGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACACCTCCGATCTGCATAAAAAGCTGGCGATTGCTGCCTCTTCATT  >  NC_000913/1301912‑1302401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.