| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 1 (0.020) | 37 (0.900) | 35/476 | 0.2 | 98.7% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | ethanolamine ammonia‑lyase reactivase EutA | |||||
GAATCAGCCGCGTCACGCAGTCATCTTCA‑TAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCC‑GACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCC‑GCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCTAAACACGCCCGTTATTCATCACGCCGAACGCGCCGGATACATGATCGGGGTTATCCAGTCGTTAAATCAAGGTATCCGGTTTTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGACAAGCCCTATAAACTCACCGATTCACT > NC_000913/2558451‑2558937 | gaaccagccGCGTCACGCAGTCTTCTTCA‑TAGGCAACCACCGGATAATGACGGATGTCCGCTCCGGTCTTTTCC‑GACAACCCCTGCTTTGCCGCCACGCGCTCTTGTGAGCTGGCC‑GCGGCGCCGCCCGCCAGCACATCCCCCGAACGCATTTCGTTGGCTTTAGCCAGCTCCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTGCATAAGTCGTTCCCTCAGGAAGg < 1:371422‑M1/245‑2 (MQ=255) ggccccgTCACGCATTCATCT‑CACTGGGCAATCCCCGGTTTATGGCGAATGCCCGCTAGGGT‑ATTTCCCGACAACCCCGGCTTTGCCCCCCCGCCCCCCTGTGGGTTGGCC‑GCTGCAACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCT‑‑AGCCAGCTCCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGgaaggaaatgcgag < 2:301216/246‑11 (MQ=255) ccGCGTCACGCAGTCATCTTCA‑TAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCC‑GACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCC‑GCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcg > 2:82202‑M1/1‑241 (MQ=255) ccGCGTCACGCAGTCATCTTCA‑TAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCC‑GACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCC‑GCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcg > 1:138188‑M1/1‑241 (MQ=255) ccccccattcatcttca‑TAGGCAATCACCGGATTAGTGCGTATGCCCCCTGCGGTCATTCCC‑GACAACCCCTGCTTTGCCCCCGCGCGTGCCGGTGAGCTTCCC‑GCTGCGACCCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTGTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatt < 1:394855‑M1/243‑16 (MQ=255) tCA‑TAGGCAATCCCCGGATTATTGCGGATGCCCCCTACGGTCATTCCC‑GACACCCCCTGCTTTGCCGCCCCGCGCCCCTGGGAGCTTGCC‑GCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccg < 1:292613‑M1/249‑28 (MQ=255) ggATTATTGCGGATGTCCGCTACGGTCATTTCC‑GACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCC‑GCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgcc > 1:293390‑M1/1‑207 (MQ=255) tGCGGATGCCCGCTACGGTCATTTCC‑GACACCCCCTGCTTGGCCGCCACTCGCTCCTGTGAGCTTGCC‑GCGGCGCCGTCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaaga < 1:264029‑M1/250‑51 (MQ=255) gATGTCCGCTCCGTTCTTTCCC‑GACAACCCCTGTTTTGCCGCCTCGCCCTCTTG‑GGGTTTGCCCGCTGCGCCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGAGTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGcc < 2:25671/251‑1 (MQ=255) tCCGCTACGGTCATTTCC‑GACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCC‑GCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtacc > 2:276705‑M1/1‑192 (MQ=255) aacgcTACGGGCATTTCC‑GACAAAACCTGCTTTTCAGCCACACGCTCCTGTGAGCTTGCC‑GCTGCGACCCCCGCCAGAACATCACCCGAACGCAGTTCGATGGCTTTAGCCAGCACCTCTTTTACCTCCTTAAACTGATATACATTGCAGAACAATGTGGTCTTTAGTTTCATACGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccgacacaaccgaaccgccaaaaagaggcgtacc > 2:361975‑M1/3‑192 (MQ=255) ggTCATTTCC‑GACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCC‑GCTGCGACGCCCGCCAGCACATCCCCCGAACTCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgat > 2:118947‑M1/1‑184 (MQ=255) tttCC‑GACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCC‑GCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagt > 1:179838‑M1/1‑179 (MQ=255) acCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCC‑GCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcgg > 1:315046‑M1/1‑168 (MQ=255) tGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCC‑GCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggac > 2:45432‑M1/1‑165 (MQ=255) gtgATCTTCCC‑GCTGCGCCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgcc < 1:68687‑M1/250‑108 (MQ=255) gcggcccccgccagcacaTCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCGCCTCTTTTACATCCTTAAACTGAGATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCGCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgt < 2:389551‑M1/245‑123 (MQ=255) gacccccgccagcaCATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtag < 1:291226‑M1/247‑125 (MQ=255) cgccAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgg > 1:250920‑M1/1‑121 (MQ=255) gccAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACCTTGCCGAACAATGTGGTCTTTCGTTTCATAAGTCGTTCCCTCAGGCAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcactgactgccaacgggagttgttgtagctgtggg > 2:270441‑M1/1‑120 (MQ=255) gccAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtggg < 1:56443‑M1/251‑132 (MQ=255) aTCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaa < 1:70876‑M1/251‑140 (MQ=255) cGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggccaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcc > 2:250170‑M1/1‑106 (MQ=255) ggCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatccccagagctttaccaaa < 2:253909‑M1/251‑161 (MQ=255) cAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggatttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgccc < 1:339900‑M1/251‑170 (MQ=255) cACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggc < 2:179838‑M1/251‑173 (MQ=255) tttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccacc > 2:253211‑M1/1‑72 (MQ=255) ccTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccatagctgtaccaaagtcctgcccggccaccaccagcaggg < 1:270441‑M1/251‑187 (MQ=255) ataCATTGCCGAACAATGTGGTCTTTAGTTTCATACGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcaccaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgcctgccaacgggagttgttgtcgctgtgggcgcaacaacatgcccagagctttaccaacgtcctgcccggcccccaccagcaggggaggcggattcg > 2:196863‑M1/1‑53 (MQ=255) ataCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaactggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattc < 2:138188‑M1/250‑198 (MQ=255) ccGAACTATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgc > 1:121134‑M1/1‑45 (MQ=255) cAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaaggcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgac < 1:356414‑M1/251‑212 (MQ=255) aaTGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacg > 1:68579‑M1/1‑39 (MQ=255) cTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgctatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgac > 1:66761‑M1/1‑31 (MQ=255) ttAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgacc < 1:276705‑M1/250‑222 (MQ=255) tAAGTCGTTCCCTCAGGAAGgaaatgcgagcgatttcaccgtaaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaacgcgttg > 1:177742‑M1/1‑20 (MQ=255) cGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaacgcgttgatgacc > 1:408442‑M1/1‑15 (MQ=255) ttCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaacgcgttgatgaccgt > 1:6995‑M1/1‑13 (MQ=255) cccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaacgcgttgataaccgtc < 1:118947‑M1/250‑240 (MQ=255) | GAATCAGCCGCGTCACGCAGTCATCTTCA‑TAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCC‑GACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCC‑GCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCTAAACACGCCCGTTATTCATCACGCCGAACGCGCCGGATACATGATCGGGGTTATCCAGTCGTTAAATCAAGGTATCCGGTTTTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGACAAGCCCTATAAACTCACCGATTCACT > NC_000913/2558451‑2558937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |